prot_H-elongata_contig11593.1255.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11593.1255.1
Unique Nameprot_H-elongata_contig11593.1255.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length400
Homology
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: D7FQF2_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF2_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 2.140e-107
Identity = 162/230 (70.43%), Postives = 195/230 (84.78%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGEWPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMGLLNA-----GSSTGKKNSAAKGKE 225
            MTG+F++KG+ RHK+VKFKV  EWPP+F KLE++M+NG CLALTDPRRL+RV+LR +PEASPPI+ LGPDP+T+PL LE FAA +AKP+APIKAVLL Q+R+VSGVGNWVADEVC+QACVHPGA CNTL PEQ+AALH++LLSVCREACE RADYT F   WLFHHRWGKGK+S GAP  +SGH I FDV+GGRTTAIVPAVQ+ GLL +     G   G+++ +A GK+
Sbjct:   89 MTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLEIQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQIAALHSRLLSVCREACEARADYTSFPKEWLFHHRWGKGKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQKKGLLRSPTAASGGVDGRRSGSASGKK 318          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A6H5JAV5_9PHAE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV5_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.780e-100
Identity = 159/224 (70.98%), Postives = 185/224 (82.59%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGEWPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHR--------------WGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMGLLNA 210
            MTG+F++KG+ RHK+VKFKV  EWPP+F KLEL+M+NG CLALTDPRRL+RV+LR +PEASPPI+ LGPDP+T+PL LE FAA +AKP+APIKAVLL Q+R+VSGVGNWVADEVC+QACVHPGA CNTL PEQVAALH++LLSVCREACE RADYT F   WLFHHR              WGKGK+S GAP  +SGH I FDV+GGRTTAIVPAVQ+ GLL +
Sbjct:  321 MTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLELQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQVAALHSRLLSVCREACEARADYTSFPKEWLFHHRQGMHHPRSPTRTLLWGKGKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQKKGLLRS 544          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A7S2W0X7_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0X7_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.280e-60
Identity = 112/206 (54.37%), Postives = 134/206 (65.05%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGEWPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMG 206
            MTGSF++KG  R  YV+FKV+  WPPKFTKL L+   G  +A  DPRRL R+ LR  PE  PPI+ L PDPI  PL   +F + +   S P+K+VLLDQE++V GVGNWVADEV YQA VHP AK N+L+  Q  A+H  L  VCR A    A    F   WLFH RWGKGK   G    A G  + F+ IGGRT+AIVPA Q+MG
Sbjct:   72 MTGSFAVKGVDRVSYVRFKVDEAWPPKFTKLLLKFEGGVEVAFCDPRRLGRILLRRCPEEEPPISKLAPDPIEQPLQSAEFCSRLQSFSGPVKSVLLDQEKVVCGVGNWVADEVLYQARVHPNAKANSLSDSQALAVHESLDVVCRTAVSVNARSAAFPEDWLFHVRWGKGK---GPVKDAQGQRVVFETIGGRTSAIVPARQKMG 274          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A835YY62_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY62_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.430e-59
Identity = 104/187 (55.61%), Postives = 134/187 (71.66%), Query Frame = 0
Query:   20 VEGEWPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMG 206
            V  EWP +FTKLE++ +NG  LA TDPRRL R+ LR DP++ PPI++L PDP+  P  +ED  A  AK SAP+KAVLLDQ R+V GVGNWVADEVCYQA +HPG+ CNTL+ EQ++ LH  L+ V   ACE  AD   +   WLFH+RW K +++GG    A G+ I+F+ +GGRTTA+VP V + G
Sbjct:  130 VGDEWPLRFTKLEIDFSNGVKLAFTDPRRLGRICLRADPKSEPPISTLAPDPLYEPPTVEDLVARFAKISAPLKAVLLDQNRIVCGVGNWVADEVCYQAGIHPGSPCNTLSAEQISQLHEALIQVVTVACEANADSDKYPKSWLFHYRWSK-RNNGGKVTDAHGNPIEFETVGGRTTALVPKVMKKG 315          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A7S1N840_9EUGL (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N840_9EUGL)

HSP 1 Score: 206 bits (523), Expect = 7.000e-59
Identity = 116/237 (48.95%), Postives = 142/237 (59.92%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGE-WPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMGLLNAGSST---------GKKNSAAKGKEVK 227
            MTGSF++KG    KY +F V  E WPP+FTKLEL    G  LA TDPRRL RV+LR  P   PPI+ L PDP+T P   E F+ I+ K   PIKAVLLDQER V GVGNWVADEV +Q+ ++PG     L   QV  LHA ++ VC+EAC+ +AD   F   WLFH+RWG GKS+   P    G  I F+   GRTTA VP  Q+      G +          GKK +A +G+  K
Sbjct:  104 MTGSFTVKGVKALKYKEFLVRDEVWPPRFTKLELVFTGGVRLAFTDPRRLGRVKLRAAPVTEPPISLLAPDPVTGPFHCEAFSQILRKAQTPIKAVLLDQERAVCGVGNWVADEVLFQSGIYPGTTAAQLTDAQVETLHATIIRVCKEACQAQADSDRFPLDWLFHYRWGHGKSADRLP---DGRRIAFETCAGRTTAWVPEAQKASSAKGGRAPSAPRTDGRLGKKEAAPRGRGQK 337          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A7S2UZQ4_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.850e-58
Identity = 114/225 (50.67%), Postives = 146/225 (64.89%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGE--WPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKG-KSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMGLLNAGSSTGKKNSAAK 222
            MTGSF I+G+    YV+ K E +  WPP+F KLEL   NG  +A  DPRRL R++LR +P  SPPI+ L  DP+ +P  L  F   + + SAP+KA LLDQ ++VSGVGNW+ADEVC+QA VHP  +CN L  E  A LH+ LL +C+ A +  ADY  F   WLFH+RWGKG K++   P   +G  I+F  +GGRTTA+VPAVQ   L   GS+   K  AAK
Sbjct:  106 MTGSFRIQGKDGVCYVRLKPEDKTVWPPRFCKLELVFENGVRVAFCDPRRLGRIKLRSNPLESPPISLLARDPVEDPPTLAQFQDRLKELSAPVKAALLDQSKIVSGVGNWIADEVCFQARVHPATRCNDLTEEMSARLHSSLLDICKFAVDVEADYHQFPDSWLFHYRWGKGNKTNSKMP---NGDKIEFSEVGGRTTAVVPAVQGKPLKAVGSTKSTKAKAAK 327          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A516AG26_LINPO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG26_LINPO)

HSP 1 Score: 192 bits (488), Expect = 3.860e-54
Identity = 105/215 (48.84%), Postives = 136/215 (63.26%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGEWPPKFTKLELEMANG----TCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMGLLNAG 211
            MTG+ +I G  R  +  F+V+  WPP+FTKL+LE+       T LA  DPRR  +V LR +    PP++ LGPDP+ +P PLE FA  + + +AP+KA+LLDQE+ V GVGNWVADEV  +A VHP A   TL+  Q+AALH  +LSV + A    AD   F  +WLFH RWG+G S  G      G  + F+ +GGRTTA VPA+QR G   AG
Sbjct:   90 MTGALAIDGVERFSFQSFRVDEAWPPRFTKLQLELGGRGQEPTRLAFADPRRFGKVLLRQNAAEEPPVSLLGPDPLASPFPLEAFAEQLRRSAAPVKALLLDQEKAVCGVGNWVADEVLREARVHPAAPARTLSDGQLAALHRGVLSVLKRAVAVDADAARFPKNWLFHCRWGQGPSGAGVCLP-DGSEVAFEDVGGRTTAYVPALQRPGERPAG 303          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A8J5XVG9_DIALT (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVG9_DIALT)

HSP 1 Score: 193 bits (490), Expect = 2.210e-53
Identity = 108/212 (50.94%), Postives = 135/212 (63.68%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGE-WPPKFTKLELEMANGT----CLALTDPRRLARVRLRD-DPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQRMG 206
            MTG+   +G    KY +  ++   WPPKFTKLEL +A+ T     LA TD RR  R+ LR+ D   SPPI +L  DPI NP   E+FA ++A+P+  IKA LLDQ RLV GVGNWVADEV YQA + P A CN L+ EQ AALHA L+ VC  AC+  AD ++F P WLFHHRW   +++G         C  FD +GGRTTA +P VQ+ G
Sbjct:   96 MTGAVLARGGEGPKYKRLTIDATVWPPKFTKLELSLADETGCTCSLAYTDSRRFGRILLREGDATLSPPILALAADPILNPPSAEEFARMLARPTTSIKAALLDQSRLVCGVGNWVADEVLYQARILPSAPCNALSAEQCAALHATLIDVCTTACKANADSSLFPPAWLFHHRWAN-QTTGSISSPLGRIC--FDTVGGRTTAFLPHVQKPG 304          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A7S0NUS3_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUS3_9EUKA)

HSP 1 Score: 188 bits (478), Expect = 3.300e-52
Identity = 107/206 (51.94%), Postives = 131/206 (63.59%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVE-GEWPPKFTKLELEMANGTCLALTDPRRLARVRLRD-DPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVPAVQR 204
            MTG+  IKG+    Y KF ++   WPP+FTKLEL   + T LA TDPRR  R+ LR   P   PP++ L  DP+T+PLPL +FAA + + SAPIKA LLDQ     GVGNWVADEV YQA V P A CN L+  Q+   HA++L+VC  AC   AD + F P WLFHHRW    S  G+  +  G  I FD +GGRTTA VPA Q+
Sbjct:   95 MTGAVVIKGRDAPLYKKFSIDMSSWPPRFTKLELVFGD-TSLAYTDPRRFGRILLRGPSPSDVPPLSELAADPLTDPLPLANFAAALRRKSAPIKAALLDQGFAFCGVGNWVADEVLYQAGVLPSAPCNRLSDAQIERTHAQVLAVCNVACAAGADASAFPPGWLFHHRWQNQTS--GSMDSPLGR-IHFDTVGGRTTAFVPAKQK 296          
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Match: A0A7S0N020_9CHLO (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N020_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 7.480e-51
Identity = 98/178 (55.06%), Postives = 122/178 (68.54%), Query Frame = 0
Query:    1 MTGSFSIKGQARHKYVKFKVEGE-WPPKFTKLELEMANGTCLALTDPRRLARVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQERLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACEKRADYTIFSPHWLFHHRWGK--GKSSG 175
            MTGSF ++ +A  +Y  FKV+ E WPP+F K+ LE+ NG  +A TD RR AR+RLR+DP ASPPI+ LG DP+ + LPLE+FA  +    AP+KAVLLDQ   V+GVGNW+ADEV YQA VHP A    + PEQVAA+H KL  V R A    A+   F   WLFH+RWGK  GK +G
Sbjct:   78 MTGSFVVENEAGVEYKSFKVDHETWPPRFHKVCLELDNGKRVAFTDARRFARIRLREDPAASPPISDLGFDPVHDDLPLEEFAKRLGARKAPVKAVLLDQA-FVAGVGNWIADEVLYQAAVHPRAPAADMLPEQVAAVHQKLYEVIRLAVAVNAEKDSFPDSWLFHYRWGKVAGKMNG 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11593.1255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQF2_ECTSI2.140e-10770.43DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A6H5JAV5_9PHAE1.780e-10070.98DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S2W0X7_9STRA1.280e-6054.37DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A835YY62_9STRA1.430e-5955.61DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S1N840_9EUGL7.000e-5948.95DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A7S2UZQ4_9STRA1.850e-5850.67DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A516AG26_LINPO3.860e-5448.84DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A8J5XVG9_DIALT2.210e-5350.94DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S0NUS3_9EUKA3.300e-5251.94DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S0N020_9CHLO7.480e-5155.06DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015886DNA glycosylase/AP lyase, H2TH DNA-bindingSMARTSM01232H2TH_2coord: 67..156
e-value: 8.4E-24
score: 95.1
IPR015886DNA glycosylase/AP lyase, H2TH DNA-bindingPFAMPF06831H2THcoord: 67..153
e-value: 2.5E-18
score: 65.8
IPR035937MutM-like, N-terminalGENE3D3.20.190.10coord: 1..66
e-value: 3.1E-11
score: 45.5
IPR035937MutM-like, N-terminalSUPERFAMILY81624N-terminal domain of MutM-like DNA repair proteinscoord: 20..72
NoneNo IPR availableGENE3D1.10.8.50coord: 67..212
e-value: 4.0E-38
score: 132.5
NoneNo IPR availablePANTHERPTHR22993:SF9ENDONUCLEASE 8-LIKE 1coord: 1..386
NoneNo IPR availablePANTHERPTHR22993FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEcoord: 1..386
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 67..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11593contigH-elongata_contig11593:4732..8286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11593.1255.1mRNA_H-elongata_contig11593.1255.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11593 4681..8593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11593.1255.1 ID=prot_H-elongata_contig11593.1255.1|Name=mRNA_H-elongata_contig11593.1255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=400bp
MTGSFSIKGQARHKYVKFKVEGEWPPKFTKLELEMANGTCLALTDPRRLA
RVRLRDDPEASPPITSLGPDPITNPLPLEDFAAIIAKPSAPIKAVLLDQE
RLVSGVGNWVADEVCYQACVHPGAKCNTLAPEQVAALHAKLLSVCREACE
KRADYTIFSPHWLFHHRWGKGKSSGGAPFTASGHCIQFDVIGGRTTAIVP
AVQRMGLLNAGSSTGKKNSAAKGKEVKTKGRTRVTKSRKHEGVGEKGSGG
DGRGGENVLSKKEVRVVTTSSVDGPNNARGGRRKKTPVSGKKSVNSIRKP
NTEDPEEAKRSRGSKRSTSKKVASAAVNSRAVTVSIADRGKAKPETAKPR
PKTATRARKMEAKPAAQNRRSKRSMGKEEKGSTGSKQKIAKRLRTSTMI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015886DNA_glyclase/AP_lyase_DNA-bd
IPR035937MutM-like_N-ter
IPR010979Ribosomal_S13-like_H2TH