prot_H-elongata_contig52440.12550.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52440.12550.1
Unique Nameprot_H-elongata_contig52440.12550.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length719
Homology
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BLAST of mRNA_H-elongata_contig52440.12550.1 vs. uniprot
Match: A0A6H5K161_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K161_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 4.580e-21
Identity = 63/81 (77.78%), Postives = 68/81 (83.95%), Query Frame = 0 
Query:  623 ADCAQEMLDASSPKAAALALKVEHLVWGVEAMSAVLSMGQLDTLKAFLLDQAARVDEAKLELVRAQERSKNEEKASILQQL 703
            A  AQ ML+ASSP+A ALAL+VEHLVWG+EAMSA LSM QLDTLKA LLDQ ARVDEAKLE VR QERSK+EEK  IL QL
Sbjct:  861 ASVAQAMLEASSPQAQALALRVEHLVWGMEAMSAGLSMAQLDTLKAVLLDQVARVDEAKLEQVRVQERSKSEEKTCILNQL 941
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BLAST of mRNA_H-elongata_contig52440.12550.1 vs. uniprot
Match: D8LLU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU4_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 5.770e-21
Identity = 68/102 (66.67%), Postives = 74/102 (72.55%), Query Frame = 0 
Query:  602 GATTPPXXAPSPAFAVSQETRADCAQEMLDASSPKAAALALKVEHLVWGVEAMSAVLSMGQLDTLKAFLLDQAARVDEAKLELVRAQERSKNEEKASILQQL 703
            GA   P  AP P    S       AQ ML++SSP+A ALAL+VEHLVWG+EAMSA LSM QLDTLKA LLDQ  RVDEAKLE VR QERSK+EEK SIL QL
Sbjct:  787 GAAAMPDGAPMPGNVAS------VAQGMLESSSPQAQALALRVEHLVWGMEAMSAGLSMAQLDTLKAVLLDQVGRVDEAKLEQVRVQERSKSEEKTSILNQL 882
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52440.12550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K161_9PHAE4.580e-2177.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU4_ECTSI5.770e-2166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 670..697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52440contigH-elongata_contig52440:390..3927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52440.12550.1mRNA_H-elongata_contig52440.12550.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52440 390..3927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52440.12550.1 ID=prot_H-elongata_contig52440.12550.1|Name=mRNA_H-elongata_contig52440.12550.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=719bp
IRWRQLECEARDKEMRLLGELDAGEGEDQGVGKGRRGNGSARESASNGGK
KTSRKKKRKQQQNHHEGSTPEGSCDGAQTLVTSQGSESPPASMSAAVRSK
TQRSDLGVSRGAGSAGAAASVEAGVSSGKRESSDSEGETDDEAGSHPSSE
ADSGSHEDSAEDRIEAADVLVEVGEGEVGAAEVVAAIPAIDSDLTLRGLT
AFDDAGAGADADATGGEGNGGGVGGGGSWSVVGPKTRKKKTATLPSPPLP
PSRSRHQPRSSIPPSGESGRSRARMFGGARVLLPVPPRPADFPPLPSGAG
TTKYTKSSVTNEDRTGVTAAPASWPGHRTSEPVLPRGVVAPAPSTAPLPP
PSVVEASAATPSIQAAEAVEPLPLTGTVSPPVEVPNPVAPATPIESAKTI
ALAATAVAAKQGEANEGGRVNNDHGVGIMKSPAVKRQLNVNANAWTPSAL
QEQRKHPPLPTPPLPPPFQHRMLQQQQQQQQISMQMPMQMRHAPASSSPM
PFSGVPMVSGNFHHQPSPHLHHPHPPLPAAAWGGQQLPYGAGHGNAGNGP
AGSAAGFGGIPQLLVQMHPGIGVNGASPRNMPPQTVTIPQGGGNGGMVFA
VGATTPPPPAPSPAFAVSQETRADCAQEMLDASSPKAAALALKVEHLVWG
VEAMSAVLSMGQLDTLKAFLLDQAARVDEAKLELVRAQERSKNEEKASIL
QQLHKNQGSVSDSSSAAPA
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