prot_H-elongata_contig115924.1254.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115924.1254.1
Unique Nameprot_H-elongata_contig115924.1254.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: D7FI20_ECTSI (Ferredoxin-dependent glutamate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI20_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 6.280e-67
Identity = 102/142 (71.83%), Postives = 120/142 (84.51%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKASDRLQAIWKAGETMLAS 142
            V SGF +VRNL+LGADLCN+AR MMFALGC+QALKCGTNHCPTG+ATQDP+L  GL V  K  RV+RFQQKTV  ATEI+SAAGVS P+EL+R MIKLR++GV S+SYGELFPPC+ GSLLEG A++ LQ IW+ G+  LAS
Sbjct:   51 VTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLAS 192          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A6H5JVG8_9PHAE (Glu_synthase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 2.830e-62
Identity = 102/142 (71.83%), Postives = 119/142 (83.80%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKASDRLQAIWKAGETMLAS 142
            V SGF IVRNL+LGADLCN+AR MMFALGC+QALKCGTNHCPTG+ATQDP+L  GL V  K  RV RFQQKTV  ATEI+SAAGVS P+EL+R MIKLR++GV S+SYGELFPPC+ GSLLEG A++ LQ +W+ G+  LAS
Sbjct:  415 VTSGFGIVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVLRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGTAAEPLQEVWRQGQAKLAS 556          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A0L0FI59_9EUKA (Glu_synthase domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FI59_9EUKA)

HSP 1 Score: 152 bits (383), Expect = 1.760e-43
Identity = 77/137 (56.20%), Postives = 100/137 (72.99%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKAS-DRLQAIWKAG 136
            V SGF++VRNLALGAD+CN+ARAMMFALGC+QALKC +N CP+GVATQ+P L  GL  +DK +RV  +Q+ TV AA  I+ AAG   P+ ++R  + +R +GV  +SY EL+P  + GSLL+G A    LQ IW AG
Sbjct:   81 VISGFSVVRNLALGADICNSARAMMFALGCIQALKCDSNKCPSGVATQNPALMAGLDPNDKSVRVFNYQKNTVDAALHIIGAAGYDSPAGVSRDHVMVRTDGVYCASYAELYPAVKPGSLLDGTAERQNLQQIWDAG 217          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A7S2AMM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMM4_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.630e-40
Identity = 79/143 (55.24%), Postives = 97/143 (67.83%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELN-RHMIKLRKNGVQSS-SYGELFPPCESGSLLEGKASDRLQAIWKAGETMLA 141
            V SGF++V+ LA GAD+CN+ARAMM ALGC+QALKC TN CPTG+ATQDP+L  GLVV  K IRVQ FQ++TV AA EI  A GV+ P+ L   H+ K    G     SY EL+P    G LL G+A   LQA W   ET+++
Sbjct:  192 VLSGFSLVKTLASGADVCNSARAMMMALGCIQALKCNTNKCPTGIATQDPDLMAGLVVPTKAIRVQNFQEQTVHAALEITGAIGVTNPASLQPNHIYKRVGTGTHGVISYDELYPSVPFGCLLTGEAPPALQASWNRAETIVS 334          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A059X468_9BACT (Conserved region in glutamate synthase n=2 Tax=uncultured bacterium TaxID=77133 RepID=A0A059X468_9BACT)

HSP 1 Score: 142 bits (358), Expect = 3.400e-40
Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLE 122
            V SGF +V+N+ALGAD+CNAARAMM +LGC+QAL+C TN CPTGVATQDP+L KGL V DKK+RV  F  +TV AA E+M+AAG++ P +L+R  I  R +  Q  +Y E++P     SLLE
Sbjct:   57 VHSGFDLVKNIALGADMCNAARAMMISLGCIQALECNTNTCPTGVATQDPKLWKGLNVDDKKVRVANFHNETVKAAVELMAAAGINHPDKLHRSHIYRRVSANQIQTYAEMYPYLLKNSLLE 178          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A3M1TPE1_9BACT (FMN-binding glutamate synthase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1TPE1_9BACT)

HSP 1 Score: 150 bits (378), Expect = 5.560e-40
Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKASDRLQAIW 133
            +A+GF IVR LALGADLCNAAR M+FALGC+QALKC TN CPTGVATQD  L+KGL V  K  RV+ FQ KTV +A E++ AAG+  P+ L  + +  R +  +    GE+FP  ESG+ LEGKA   LQA W
Sbjct:  411 IATGFHIVRQLALGADLCNAARTMLFALGCIQALKCNTNRCPTGVATQDRALAKGLDVESKAWRVRNFQSKTVESALELIGAAGLDDPARLRPYHVVRRVSRTEVRHLGEIFPLVESGAFLEGKAPPELQAWW 543          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: UPI00198CAD12 (FMN-binding glutamate synthase family protein n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=UPI00198CAD12)

HSP 1 Score: 144 bits (362), Expect = 1.300e-39
Identity = 71/130 (54.62%), Postives = 93/130 (71.54%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKASDRLQ 130
            VA+GF IV+N+ALGAD+CNAAR MMFALGC+QAL+C  N CPTGVATQD  L KGLVV DKK+RV+ F  +TV +A +++ AAG+  PS+L R  +  R +  +  SY E++P   +GSLLE     R +
Sbjct:  140 VATGFDIVKNIALGADMCNAARGMMFALGCIQALECNRNTCPTGVATQDQSLMKGLVVEDKKVRVKNFHSQTVASAVDLLGAAGLRTPSQLTRAYVNRRVSASKMQSYLEIYPYTPTGSLLETPYPSRFE 269          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A519KBF5_FLASP (FMN-binding glutamate synthase family protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A519KBF5_FLASP)

HSP 1 Score: 146 bits (368), Expect = 1.020e-38
Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKA-SDRLQAIWKAGET 138
            V SGF I+R L++GADLCN+AR MMFALGC+QAL+C  N CPTGVATQDP+L+KGLV  +K +RV R+Q +TV AA E+M++AG+  P  + R ++ +R +    S + ELFP  + G LL+ +   D L   WKA  +
Sbjct:  385 VISGFDIIRALSMGADLCNSARGMMFALGCIQALECHNNTCPTGVATQDPKLTKGLVPEEKSVRVARYQHETVRAAMELMASAGIDHPDNVGRDLVSMRIDKTHISKFSELFPELKKGCLLQAETVPDNLYYDWKAASS 523          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A2S1SJ69_9FLAO (FMN-binding glutamate synthase family protein n=1 Tax=Flavobacterium pallidum TaxID=2172098 RepID=A0A2S1SJ69_9FLAO)

HSP 1 Score: 146 bits (368), Expect = 1.040e-38
Identity = 71/135 (52.59%), Postives = 97/135 (71.85%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLLEGKA-SDRLQAIWK 134
            V SGF I+R L++GADLCN+AR MMFALGC+QAL+C  N CPTGVATQDP L+KGLV   K IRV R+Q +TV AA E+M++AG+  P ++ R ++ +R + +   ++ ELFP  + GSLL+ +   D+L   WK
Sbjct:  386 VVSGFDIIRALSMGADLCNSARGMMFALGCIQALECHANTCPTGVATQDPALTKGLVPEQKSIRVARYQHETVKAAMELMASAGIEHPDDVGRDLVSMRIDKINIQTFAELFPEPKKGSLLQSETVPDKLFYAWK 520          
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Match: A0A1G8JHM8_9SPHI (Glutamate synthase domain-containing protein 2 n=13 Tax=Mucilaginibacter TaxID=423349 RepID=A0A1G8JHM8_9SPHI)

HSP 1 Score: 146 bits (368), Expect = 1.270e-38
Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = 0
Query:    1 VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDPELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRKNGVQSSSYGELFPPCESGSLL 121
            VA+GF +V+N ALGAD+CN+AR MMFALGC+QAL+C TN CPTGVATQD  L KGLVV DKK+RV  F ++TV +A +++ AAG+S+P +L+R  I  R N  Q  +YGELFP    GSLL
Sbjct:  386 VATGFDLVKNFALGADMCNSARGMMFALGCIQALECNTNTCPTGVATQDKSLMKGLVVDDKKVRVANFHRQTVSSAIQMIGAAGLSKPCDLHRMYIYRRVNHSQILTYGELFPYIPKGSLL 506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115924.1254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI20_ECTSI6.280e-6771.83Ferredoxin-dependent glutamate synthase n=1 Tax=Ec... [more]
A0A6H5JVG8_9PHAE2.830e-6271.83Glu_synthase domain-containing protein n=1 Tax=Ect... [more]
A0A0L0FI59_9EUKA1.760e-4356.20Glu_synthase domain-containing protein (Fragment) ... [more]
A0A7S2AMM4_9STRA1.630e-4055.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A059X468_9BACT3.400e-4058.20Conserved region in glutamate synthase n=2 Tax=unc... [more]
A0A3M1TPE1_9BACT5.560e-4057.89FMN-binding glutamate synthase family protein n=1 ... [more]
UPI00198CAD121.300e-3954.62FMN-binding glutamate synthase family protein n=1 ... [more]
A0A519KBF5_FLASP1.020e-3851.08FMN-binding glutamate synthase family protein n=1 ... [more]
A0A2S1SJ69_9FLAO1.040e-3852.59FMN-binding glutamate synthase family protein n=1 ... [more]
A0A1G8JHM8_9SPHI1.270e-3860.33Glutamate synthase domain-containing protein 2 n=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002932Glutamate synthase domainPFAMPF01645Glu_synthasecoord: 3..85
e-value: 3.4E-18
score: 65.9
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..111
e-value: 1.0E-23
score: 85.8
NoneNo IPR availablePANTHERPTHR11938:SF50coord: 3..113
NoneNo IPR availablePANTHERPTHR11938FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEcoord: 3..113
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 2..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115924contigH-elongata_contig115924:30..1731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115924.1254.1mRNA_H-elongata_contig115924.1254.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115924 30..1731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115924.1254.1 ID=prot_H-elongata_contig115924.1254.1|Name=mRNA_H-elongata_contig115924.1254.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
VASGFAIVRNLALGADLCNAARAMMFALGCVQALKCGTNHCPTGVATQDP
ELSKGLVVSDKKIRVQRFQQKTVLAATEIMSAAGVSRPSELNRHMIKLRK
NGVQSSSYGELFPPCESGSLLEGKASDRLQAIWKAGETMLAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002932Glu_synthdom
IPR013785Aldolase_TIM