mRNA_H-elongata_contig52318.12537.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52318.12537.1
Unique NamemRNA_H-elongata_contig52318.12537.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: D7FPW5_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW5_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.470e-80
Identity = 145/236 (61.44%), Postives = 162/236 (68.64%), Query Frame = 1 
Query:    1 FPSTLDMYEFCAPSLPAILKVPRDAADKLIFEEEAKVKAEKEIKLAKDKADKGKK--GKVFAHLSGAAVRKPSLPVPPPAKQGESETVVGGGSAVEESKDMDIDSTVLKSEEASTKSKAGEGKGGAMEGVNGDDANDELKVALAMSMEVEDAGVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDGDDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFKD 702
            FPSTLDM+EFC+PSL +ILKVPRDAADKLIFE+EAK KA KE               GKVFAHLSG                   ++   G   V+ESKDM++DS                   G  E     + +D+LK ALAMSM+ EDAGVEGA+GPGLP DFKG YELFAVVTHKGREADGGHYMGWVRQ+GDDWLVFDD+DVSPCKTEDIMNLKGGGDWHMAYLTFYRFK+
Sbjct:  411 FPSTLDMFEFCSPSLQSILKVPRDAADKLIFEQEAKEKAAKEAXXXXXXXXXXXXXXGKVFAHLSGXXXXXXXXXXXXXXXXXAEKSAASG---VQESKDMEVDSXXXXXXXXXXXXXXXXPAEGEDE-----ELSDDLKAALAMSMQAEDAGVEGAAGPGLPADFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 638
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: A0A7S3XWY9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWY9_HETAK)

HSP 1 Score: 159 bits (401), Expect = 7.440e-46
Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 1 
Query:  388 GDDANDELKVALAMSMEVEDA-GVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDG------DDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFKD 702
            G++  + L+ ALA+SM+   A   EGA+GPGLPGDF+GNYELF VVTHKGREADGGHYMGWV+Q+G      D W VFDDADVS    E++M LKGGGDWHMAYLTFYR+K+
Sbjct:   42 GEEEREALEAALALSMQPGAAVAAEGAAGPGLPGDFRGNYELFGVVTHKGREADGGHYMGWVKQEGGRGDPSDKWFVFDDADVSETTEEEVMKLKGGGDWHMAYLTFYRYKN 153
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: A0A7S2DH50_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH50_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.260e-43
Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 1 
Query:  391 DDANDELKVALAMSMEVEDAGVEGAS-----GPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDGDDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFKD 702
            +D +++LK ALA+S  +  A  +  S     G GL  DF+GNYELFA+VTHKGR ADGGHY+GWVRQ+GDDWLVFDDADVSPCKTED++ LKGGGD+HMAYLTFYR K+
Sbjct:  171 EDEDEDLKAALALSTAMNTADSQPVSNKDRVGYGLDPDFQGNYELFALVTHKGRLADGGHYIGWVRQEGDDWLVFDDADVSPCKTEDVLPLKGGGDYHMAYLTFYRSKN 279
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: A0A7S2DHH2_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHH2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 4.830e-41
Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 1 
Query:  391 DDANDELKVALAMSMEVEDAGVEGAS-----GPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDGDDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFKD 702
            +D +++LK ALA+S  +  A  +  S     G GL  DF+GNYELFA+VTHKGR ADGGHY+GWVRQ+GDDWLVFDDADVSPCKTED++ LKGGGD+HMAYLTFYR K+
Sbjct:  417 EDEDEDLKAALALSTAMNTADSQPVSNKDRVGYGLDPDFQGNYELFALVTHKGRLADGGHYIGWVRQEGDDWLVFDDADVSPCKTEDVLPLKGGGDYHMAYLTFYRSKN 525
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: W7TNR7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNR7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.380e-40
Identity = 78/117 (66.67%), Postives = 84/117 (71.79%), Query Frame = 1 
Query:  355 EGKGGAMEGVNGDDANDELKVALAMSM-EVEDAGVEGAS-GPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDGDDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 699
            E KG    G    +    L+ ALAMSM +  DA V  A  GPGLP DFKG YELF VVTHKGR ADGGHYMGWVRQ GDDWLVFDD DVS CKT +++ L GGGDWHMAYL FYRFK
Sbjct:  396 EAKGEESSGNGSSEEEAALQAALAMSMADSADAAVPPAPCGPGLPMDFKGLYELFGVVTHKGRTADGGHYMGWVRQKGDDWLVFDDEDVSECKTAEVLQLSGGGDWHMAYLCFYRFK 512
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: A0A7S0AW48_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AW48_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.510e-40
Identity = 74/125 (59.20%), Postives = 85/125 (68.00%), Query Frame = 1 
Query:  382 VNGDDANDE--LKVALAMSMEVEDAGVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQD-----------------GDDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 699
            V GDDA ++  LK ALAMS+E E   V    GPGLP +F+G YELFAVVTHKGR+ADGGHYM WVR +                  DDW VFDD +VSPCKTED++ LKGGGDWHM+YL FYR K
Sbjct:   39 VAGDDAEEDEALKAALAMSVEEELTPV----GPGLPDNFQGQYELFAVVTHKGRDADGGHYMAWVRGEKPEGAPEAEKIGDSEDTNDDWYVFDDDEVSPCKTEDVLKLKGGGDWHMSYLNFYRCK 159
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: A0A7S1TQP1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQP1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.150e-39
Identity = 71/100 (71.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:  400 NDELKVALAMSMEVEDAGVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDGDDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 699
            +DELK A+AMSM   DAG      PGLP DFKGNYELF VVTHKGREAD GHY+GWVRQ+GD WLVFDD  V    TE I+NLKGGGDWHMAYL FYR +
Sbjct:  392 DDELKAAMAMSMPPVDAG------PGLPDDFKGNYELFGVVTHKGREADAGHYIGWVRQEGDQWLVFDDDHVEEVNTEAILNLKGGGDWHMAYLAFYRAR 485
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: K0TKS4_THAOC (USP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKS4_THAOC)

HSP 1 Score: 144 bits (362), Expect = 1.710e-39
Identity = 79/142 (55.63%), Postives = 91/142 (64.08%), Query Frame = 1 
Query:  340 KSKAGEGKGGAMEGVNGDDANDELKVALAMSMEVEDAGVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDG----------------------DDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 699
            K K G+G    M+G + +D  D L+ ALAMS+E E   V    GPGLP DF+G YELFAVVTHKGR+ADGGHYMGWV+ D                       DDW VFDD +VSPCKTEDI+ LKGGGDWHM+YL FYR K
Sbjct:   54 KKKDGDGDA-EMDGADDEDDAD-LRAALAMSVEPELPPV----GPGLPPDFRGLYELFAVVTHKGRDADGGHYMGWVKADNSGRQAAGDDKKREKIGDTEEENDDWYVFDDDEVSPCKTEDILKLKGGGDWHMSYLNFYRAK 189
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: B7G630_PHATC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G630_PHATC)

HSP 1 Score: 151 bits (382), Expect = 1.780e-39
Identity = 66/105 (62.86%), Postives = 83/105 (79.05%), Query Frame = 1 
Query:  394 DANDELKVALAMSMEVEDAGVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDG---DDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 699
            +A+++L+ ALAMS+E  D   +   GPGLP +F+G YELFAV+THKGR+ADGGHYM WV+ D    +DW VFDD +VSPCKTED++ LKGGGDWHM+YL FYR K
Sbjct:  394 EADEDLQAALAMSLETTDGTAKTPIGPGLPENFQGQYELFAVITHKGRDADGGHYMAWVKADNPTNEDWFVFDDDEVSPCKTEDVLKLKGGGDWHMSYLNFYRAK 498
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BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Match: B8BX32_THAPS (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BX32_THAPS)

HSP 1 Score: 152 bits (383), Expect = 1.910e-39
Identity = 72/104 (69.23%), Postives = 81/104 (77.88%), Query Frame = 1 
Query:  403 DELKVALAMSMEVEDAGVEGASGPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDG-----DDWLVFDDADVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 699
            +EL+ ALAMS+E E   V    GPGLP DF+G YELFAVVTHKGR+ADGGHYMGWV+ D      DDW VFDD +VSPCKTEDI+ LKGGGDWHM+YL FYR K
Sbjct:  428 EELQAALAMSVETEQPPV----GPGLPHDFQGLYELFAVVTHKGRDADGGHYMGWVKADNSDPHNDDWFVFDDDEVSPCKTEDILKLKGGGDWHMSYLNFYRAK 527
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52318.12537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPW5_ECTSI1.470e-8061.44Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A7S3XWY9_HETAK7.440e-4666.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DH50_9STRA3.260e-4366.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2DHH2_9STRA4.830e-4166.97Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dict... [more]
W7TNR7_9STRA1.380e-4066.67Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Mono... [more]
A0A7S0AW48_9STRA3.510e-4059.20Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S1TQP1_9STRA1.150e-3971.00Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phae... [more]
K0TKS4_THAOC1.710e-3955.63USP domain-containing protein n=1 Tax=Thalassiosir... [more]
B7G630_PHATC1.780e-3962.86Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phae... [more]
B8BX32_THAPS1.910e-3969.23Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52318contigH-elongata_contig52318:1786..4010 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.6
Seed ortholog evalue4.4e-65
Seed eggNOG ortholog2880.D7FPW5
KEGG koko:K11843
EggNOG free text desc.negative regulation of ER-associated ubiquitin-dependent protein catabolic process
EggNOG OGsKOG1872@1,KOG1872@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Hectar predicted targeting categoryother localisation
Exons5
Model size705
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52318.12537.1prot_H-elongata_contig52318.12537.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52318 1786..3992 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930855.7337108-CDS-H-elongata_contig52318:1785..19401622930855.7337108-CDS-H-elongata_contig52318:1785..1940Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 1786..1940 -
1691679599.3802555-CDS-H-elongata_contig52318:1785..19401691679599.3802555-CDS-H-elongata_contig52318:1785..1940Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 1786..1940 -
1622930855.7499108-CDS-H-elongata_contig52318:2414..25131622930855.7499108-CDS-H-elongata_contig52318:2414..2513Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 2415..2513 -
1691679599.3905487-CDS-H-elongata_contig52318:2414..25131691679599.3905487-CDS-H-elongata_contig52318:2414..2513Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 2415..2513 -
1622930855.7635067-CDS-H-elongata_contig52318:2794..29581622930855.7635067-CDS-H-elongata_contig52318:2794..2958Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 2795..2958 -
1691679599.3985558-CDS-H-elongata_contig52318:2794..29581691679599.3985558-CDS-H-elongata_contig52318:2794..2958Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 2795..2958 -
1622930855.7763393-CDS-H-elongata_contig52318:3268..34951622930855.7763393-CDS-H-elongata_contig52318:3268..3495Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 3269..3495 -
1691679599.408727-CDS-H-elongata_contig52318:3268..34951691679599.408727-CDS-H-elongata_contig52318:3268..3495Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 3269..3495 -
1622930855.7927988-CDS-H-elongata_contig52318:3950..39921622930855.7927988-CDS-H-elongata_contig52318:3950..3992Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 3951..3992 -
1691679599.416992-CDS-H-elongata_contig52318:3950..39921691679599.416992-CDS-H-elongata_contig52318:3950..3992Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52318 3951..3992 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930855.8144312-UTR-H-elongata_contig52318:3992..40101622930855.8144312-UTR-H-elongata_contig52318:3992..4010Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52318 3993..4010 -
1691679599.425266-UTR-H-elongata_contig52318:3992..40101691679599.425266-UTR-H-elongata_contig52318:3992..4010Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52318 3993..4010 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52318.12537.1

>prot_H-elongata_contig52318.12537.1 ID=prot_H-elongata_contig52318.12537.1|Name=mRNA_H-elongata_contig52318.12537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
MYEFCAPSLPAILKVPRDAADKLIFEEEAKVKAEKEIKLAKDKADKGKKG
KVFAHLSGAAVRKPSLPVPPPAKQGESETVVGGGSAVEESKDMDIDSTVL
KSEEASTKSKAGEGKGGAMEGVNGDDANDELKVALAMSMEVEDAGVEGAS
GPGLPGDFKGNYELFAVVTHKGREADGGHYMGWVRQDGDDWLVFDDADVS
PCKTEDIMNLKGGGDWHMAYLTFYRFKD*
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mRNA from alignment at H-elongata_contig52318:1786..4010-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52318.12537.1 ID=mRNA_H-elongata_contig52318.12537.1|Name=mRNA_H-elongata_contig52318.12537.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2225bp|location=Sequence derived from alignment at H-elongata_contig52318:1786..4010- (Himanthalia elongata Himel1 dioecious)
TTCCCCTCAACGCTGGATATGTATGAGTTCTGCGCGCCCTCACTGCCAGC
CATACTTAAGGTAACGGACTAGACCGCGCCATCCATGTTCTCATTCCGCC
ATCTCGCAATATTATAGTACAGTATTTCATTTAGCGCCCGAGGGTGACGG
CCCAGCTTTTACATTTTTGAAACCGCTGCTGTGTATGATCACGGCCAGCT
TTGCTCTCTGTTAGTAATAGTAGCTCTTTTTTGTTTTTTTTTGTCACGCG
TGTACTCCTATTGGAACTATTCTTACTGGTGTTAAGAGTTAGGGTTTGCG
GGGTTGGCGTTATCTTCCAAGCTAGGTTTGGCAGTGGCATCAACGCGCGT
AACGAGATCGTACCATATATATGATGTAGTGTATGATGTTTGTAATCATT
GTCACGTGATGCATAAAATGCGATGATCCTAAACGCGACAATAATTTGAT
TTTAATATATATATATATATATATAAATGTATTATCATTATTTATAATGT
GATGTGGGGTGATAGGTTCCGCGAGACGCCGCCGATAAGTTGATATTCGA
GGAAGAAGCCAAGGTCAAGGCGGAGAAGGAAATAAAGCTCGCCAAGGACA
AGGCTGACAAGGGGAAGAAGGGAAAGGTGTTCGCCCACCTCTCGGGCGCC
GCCGTGCGAAAACCTTCGCTGCCGGTACCGCCGCCTGCGAAACAGGGCGA
ATCAGAGACGGTAGTCGGCGGTGGGTCGGCTGTCGAGGAGAGGTAAGGTG
TCAGGTGCTGTCACTCACGCTTGGTTGTGGTAACTGATGGGTGGCTTGGC
CAGACATCGTCCCGAGATATTAGCATCCTCATCTCTTTCTTGGCGGTTGA
CTGTGGGCGCAAGAAGACGTGACTAACAGGAGGTGGAGGTGGAAGATGTG
TGATGGTGTTGGTGTTGGTGTTGGATTCCTTTCCAATCGGAAGGAGGGAG
TTGTTTGTGGTGTATGGTGGTCGTTGTCGTTATCGTTATAATCGTTTCAA
ATGTTTTCGCTCTTCTATTTTTTTTCCCCCACACCGGGCGTGAATCGTGC
AGCAAGGATATGGACATTGACAGCACCGTGCTAAAATCAGAAGAAGCAAG
CACAAAATCAAAAGCAGGAGAAGGGAAGGGGGGGGCGATGGAAGGGGTCA
ACGGGGATGACGCCAACGATGAGCTCAAGGTCGCCTTGGCGATGTCTATG
GAAGTGGAAGATGCAGGTCAGGGAAGAGTTTACCAGCAATATTAAAAAAT
AAAAATAAGGAAATCATGCATTGGCGTACCCACCCTCGTTCGGCGCCACC
AGCAGAAGGTGGTGTCCAGAAGTGCTCGAGGGTTATGCCGCTCCGGTCCG
TTATAGGTACAAGTGTGTCGTCTTACTATGGTCTCGCGCGATCAATTCTA
TTTATATTAATTAGTGGATGTGTTGTTTTCCTCCAGAGTCGGGAGGGGGC
GAAAAAGTCGTAGTTGATCTACGCGTCATGCGGTGCACCGCCGGCAGGTG
TAGAGGGCGCGAGTGGTCCGGGGCTGCCGGGCGACTTCAAGGGAAACTAC
GAGCTGTTCGCGGTCGTGACCCACAAGGGGCGGGAAGCCGATGGAGGTAC
ATTACGTGATAACGTTAGGGTTTGTGTGTGTGTGTGTTTGCCCACGCATG
TGGTTTGTTTACCGTTTACGATGAACGGGGCAAACCGGCTTGCGTTCCAT
GGCGAAAGGATGATCCGGATGCGGTCATTTCCTGCAGGGGCCGCGTGAAC
GGCGAAGATCCCACCTAGGAAACCCTTTCGTTCACCTGCCGTGTATTTGG
AGGGTGATTTAGCATCATACATCATAGCACAGGAATGCTTTTTCGCGAGC
CAGGGTGGCTATATTTTGGGTGACCACCGCCAGCTTCTATCCTTGCACTC
AATCGCCTTTTTTCGACATCAGATCCGAGATACGCGATCTGTGTGGTGTG
TGCTAGACGATAGTTTCATTTAATTAAAAAAAAACTTTCTTCTCTTATCC
AATTTTTGTCCATCTGCCGCGCTCTTTTTTTCTTCTTCTTTTTCTCCTTA
ACGCCGGGGCCGTAAACAAGGCCATTACATGGGATGGGTTCGGCAGGATG
GAGACGACTGGCTTGTTTTTGACGACGCCGACGTATCTCCCTGCAAAACC
GAGGACATTATGAACCTGAAAGGGGGAGGCGACTGGCACATGGCCTATCT
TACCTTCTATCGTTTCAAGGATTAG
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Coding sequence (CDS) from alignment at H-elongata_contig52318:1786..4010-

>mRNA_H-elongata_contig52318.12537.1 ID=mRNA_H-elongata_contig52318.12537.1|Name=mRNA_H-elongata_contig52318.12537.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig52318:1786..4010- (Himanthalia elongata Himel1 dioecious)
ATGTATGAGTTCTGCGCGCCCTCACTGCCAGCCATACTTAAGATGTATGA
GTTCTGCGCGCCCTCACTGCCAGCCATACTTAAGGTTCCGCGAGACGCCG
CCGATAAGTTGATATTCGAGGAAGAAGCCAAGGTCAAGGCGGAGAAGGAA
ATAAAGCTCGCCAAGGACAAGGCTGACAAGGGGAAGAAGGGAAAGGTGTT
CGCCCACCTCTCGGGCGCCGCCGTGCGAAAACCTTCGCTGCCGGTACCGC
CGCCTGCGAAACAGGGCGAATCAGAGACGGTAGTCGGCGGTGGGTCGGCT
GTCGAGGAGAGGTTCCGCGAGACGCCGCCGATAAGTTGATATTCGAGGAA
GAAGCCAAGGTCAAGGCGGAGAAGGAAATAAAGCTCGCCAAGGACAAGGC
TGACAAGGGGAAGAAGGGAAAGGTGTTCGCCCACCTCTCGGGCGCCGCCG
TGCGAAAACCTTCGCTGCCGGTACCGCCGCCTGCGAAACAGGGCGAATCA
GAGACGGTAGTCGGCGGTGGGTCGGCTGTCGAGGAGAGCAAGGATATGGA
CATTGACAGCACCGTGCTAAAATCAGAAGAAGCAAGCACAAAATCAAAAG
CAGGAGAAGGGAAGGGGGGGGCGATGGAAGGGGTCAACGGGGATGACGCC
AACGATGAGCTCAAGGTCGCCTTGGCGATGTCTATGGAAGTGGAAGATGC
AGCAAGGATATGGACATTGACAGCACCGTGCTAAAATCAGAAGAAGCAAG
CACAAAATCAAAAGCAGGAGAAGGGAAGGGGGGGGCGATGGAAGGGGTCA
ACGGGGATGACGCCAACGATGAGCTCAAGGTCGCCTTGGCGATGTCTATG
GAAGTGGAAGATGCAGGTGTAGAGGGCGCGAGTGGTCCGGGGCTGCCGGG
CGACTTCAAGGGAAACTACGAGCTGTTCGCGGTCGTGACCCACAAGGGGC
GGGAAGCCGATGGAGGTGTAGAGGGCGCGAGTGGTCCGGGGCTGCCGGGC
GACTTCAAGGGAAACTACGAGCTGTTCGCGGTCGTGACCCACAAGGGGCG
GGAAGCCGATGGAGGCCATTACATGGGATGGGTTCGGCAGGATGGAGACG
ACTGGCTTGTTTTTGACGACGCCGACGTATCTCCCTGCAAAACCGAGGAC
ATTATGAACCTGAAAGGGGGAGGCGACTGGCACATGGCCTATCTTACCTT
CTATCGTTTCAAGGATTAGGCCATTACATGGGATGGGTTCGGCAGGATGG
AGACGACTGGCTTGTTTTTGACGACGCCGACGTATCTCCCTGCAAAACCG
AGGACATTATGAACCTGAAAGGGGGAGGCGACTGGCACATGGCCTATCTT
ACCTTCTATCGTTTCAAGGATTAG
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