mRNA_H-elongata_contig52291.12536.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE) HSP 1 Score: 297 bits (760), Expect = 2.250e-91 Identity = 161/363 (44.35%), Postives = 217/363 (59.78%), Query Frame = 1
Query: 7 KSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAVVAPTDADYSFPSMGEIRDRQD----SYTDGKAGLDSPLGSVVRGGNGLYRVDYGGCPA------ERFLQVRLV-CAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLG-----------DSDGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMGATPFQLMTG 1029
K+T+QRL NW+ + ++ Y I+HI G N WG+LLSR ++ V RS AV P+ D + PS IR+ Q S D A LG V GL+RV G R +Q+RL+ CAHM+EAGH + ATMHRL YC W M DV EFVQQCLHC+DS++G ++PRP GE +H GEVLHFDYL +G +SDGY Y+LV++DDLS F ++ +CT+ ++A+ +L LG P V+++D A HFKN ++ + LG RF+VA S WSNGT ERM E+VRT +AV+ ER R + +W D + AVQ+ALN+AYRER +TP+ +M G
Sbjct: 296 KTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPA----------VSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFG 648
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 297 bits (760), Expect = 2.380e-87 Identity = 161/363 (44.35%), Postives = 217/363 (59.78%), Query Frame = 1
Query: 7 KSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAVVAPTDADYSFPSMGEIRDRQD----SYTDGKAGLDSPLGSVVRGGNGLYRVDYGGCPA------ERFLQVRLV-CAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLG-----------DSDGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMGATPFQLMTG 1029
K+T+QRL NW+ + ++ Y I+HI G N WG+LLSR ++ V RS AV P+ D + PS IR+ Q S D A LG V GL+RV G R +Q+RL+ CAHM+EAGH + ATMHRL YC W M DV EFVQQCLHC+DS++G ++PRP GE +H GEVLHFDYL +G +SDGY Y+LV++DDLS F ++ +CT+ ++A+ +L LG P V+++D A HFKN ++ + LG RF+VA S WSNGT ERM E+VRT +AV+ ER R + +W D + AVQ+ALN+AYRER +TP+ +M G
Sbjct: 1072 KTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPA----------VSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFG 1424
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 286 bits (733), Expect = 1.060e-83 Identity = 159/368 (43.21%), Postives = 221/368 (60.05%), Query Frame = 1
Query: 1 LSKSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAVVAPTDADYSFPSMGEIRDRQDSYTDGKAGLDSP-------LGSVVRGGNGLYRVDYGG-----CPAERF-LQVRL-VCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLGDS-----------DGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMGATPFQLMTG 1029
++K+T+QRL W+ + ++ Y IRHI G N WG+LLSR S+ V VR+ AV AP++ D + PS +RD Q + L P +G+ GL+RV G P + LQVRL VCAHM+EAGH AT+ RL YC W M+E VT+FV+QCLHC+DS+AG +PRPLGE +H T GEV+HFDYL +G S +G+ Y+LV++DD+S +V L+ +CT+ ++A+ +L +LG P V+++D A HFKN + + T LG FSVA S WSNGT ERM EVVRT +A++ E +W D + AVQ+ALN+A+RER G+TP+ +M G
Sbjct: 1169 VAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSVPS----------VSVRAAAVYAPSEPDAAMPSKQVVRDAQQAARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFG 1526
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE) HSP 1 Score: 202 bits (515), Expect = 4.160e-58 Identity = 100/201 (49.75%), Postives = 135/201 (67.16%), Query Frame = 1
Query: 460 MKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLG-----------DSDGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMGATPFQLMTG 1029
M DV EFVQQCLHC+DS++G ++PRP GE +H GEVLHFDYL +G +SDGY Y+LV++DDLS F ++ +CT+ ++A+ +L LG P V+++D A HFKN ++ + LG RF+VA S WSNGT ERM EVVRT +AV+ ER R L +W D + AVQ+ALN+AYRER +TP+ +M G
Sbjct: 1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFG 201
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: H3H7B6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7B6_PHYRM) HSP 1 Score: 189 bits (480), Expect = 1.530e-51 Identity = 127/354 (35.88%), Postives = 184/354 (51.98%), Query Frame = 1
Query: 1 LSKSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRS--IAVVAPT----DADYSFPSMGEIRDRQDSYTDGKAGLDSPLGSVVRGGNGLYRVDYGGC---PAERFLQVRL-VCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLGDS-DGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERM-GATPFQLMT 1026
+++ + +L W + F YVI H+PG EN WG+LLSR GA E +R+ +AVV +AD+ +PS EIR Q + AG + G L G P LQ RL V AH +GH AT+ L W M DVT FV +CLHC+ + AG IPRP GE L T EVLHFD+L + +S G YVLVL D +S FV L TS+ +++ +++ G +++D HF+N+ + + LGA H F+ AY+ W+NGTVE +N EV+++ +A+++ER + +WP + VQ ALN+ +R+ G +P T
Sbjct: 1 MARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW-----GAGPPLEATRTAIRAARLAVVERVSPLEEADFVWPSEQEIRAVQQA-----AGAAAHPGVQWNEERQLQMTSTGQVWIPPDSGELQQRLCVVAHAGASGHRGAAATLKSLSTCFFWPTMGPDVTTFVNECLHCMVA-AGGRIPRPFGETLRATRPNEVLHFDFLTMIESTSGVKYVLVLKDGMSGFVELLACTHATSDHASQGLIDWFKRFGVVHQWVSDQGAHFRNQVVERLQRALGAHHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRMHVQDWPAVLPVVQAALNAMPADRLDGRSPLTAFT 343
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6A3W606_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3W606_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.430e-50 Identity = 124/355 (34.93%), Postives = 184/355 (51.83%), Query Frame = 1
Query: 1 LSKSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAV---VAPT-DADYSFPSMGEIRDRQDSYTDGK-------AGLDSPLGSVVRGGNGLYRVDYGGCPAERFLQVRLVCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLGDSD-GYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMGA-TPFQLMT 1026
L + + +L W + F YVI H+PG +N WG+LLSR + G+ S E+ V V +AV V+P D ++ +P+ EIR Q+ D+ VVR ++ A Q V AH +GH T L W M DV+ FV CLHC+ + G V PRP GE L T+ EVLHFD+L + + + G YVLVL D +S FV L S TS+ + +S+L+ G +++D HFKN+ + ++ LGA+H F+ AY+ W+NGTVE +N EV+++ +A+++ER + +WP + VQ ALN+ +R+G TP T
Sbjct: 268 LLRPVADKLQRWSISLMSFRYVIEHVPGEQNVWGDLLSRWGA---GSTASSEQAAVRVTRLAVIERVSPLEDPEFVWPTENEIRTLQELARSADPNDEHDATAYDADRRLVVRADGQVWIPS----TAVEMQQRLCVVAHAGASGHRGAQTTTTALSNLFYWRTMAADVSAFVAGCLHCMVTANGRV-PRPYGETLVATKPNEVLHFDFLTMIEGERGLKYVLVLKDGMSGFVELVACVSATSDQAYQSLLDWFKRFGVVHQWISDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFT 614
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM) HSP 1 Score: 188 bits (477), Expect = 1.650e-49 Identity = 127/354 (35.88%), Postives = 183/354 (51.69%), Query Frame = 1
Query: 1 LSKSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRS--IAVVAPT----DADYSFPSMGEIRDRQDSYTDGKAGLDSPLGSVVRGGNGLYRVDYGGC---PAERFLQVRL-VCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLGDS-DGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERM-GATPFQLMT 1026
+++ + +L W + F YVI H+PG EN WG+LLSR GA E +R+ +AVV +AD+ +PS EIR Q + AG + G L G P LQ RL V AH +GH AT+ L W M DVT FV +CLHC+ + AG IPRP GE L T EVLHFD+L + +S G YVLVL D +S FV L TS+ + + +++ G +++D HF+N+ + + LGA H F+ AY+ W+NGTVE +N EV+++ +A+++ER + +WP + VQ ALN+ +R+ G +P T
Sbjct: 1088 MARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW-----GAGPPLEATRTAIRAARLAVVERVSPLEEADFVWPSEQEIRAVQQA-----AGAAAHPGVQWNEERQLQMTSTGQVWIPPDSGELQQRLCVVAHAGASGHRGAAATLKSLSTCFFWPTMGPDVTTFVNECLHCMVA-AGGRIPRPFGETLRATRPNEVLHFDFLTMIESTSGVKYVLVLKDGMSGFVELLACTHATSDHAYQGLIDWFKRFGVVHQWVSDQGAHFRNQVVERLQRALGAHHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRMHVQDWPAVLPVVQAALNAMPADRLDGRSPLTAFT 1430
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM) HSP 1 Score: 186 bits (473), Expect = 3.740e-49 Identity = 126/354 (35.59%), Postives = 182/354 (51.41%), Query Frame = 1
Query: 1 LSKSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRS--IAVVAPT----DADYSFPSMGEIRDRQDSYTDGKAGLDSPLGSVVRGGNGLYRVDYGGC---PAERFLQVRL-VCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKL-GDSDGYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERM-GATPFQLMT 1026
+++ + +L W + F YVI H+PG EN WG+LLSR GA E +R+ +AVV +AD+ +PS EIR Q + AG + G L G P LQ RL V AH +GH AT+ L W M DVT FV +CLHC+ + AG IPRP GE L T EVLHFD+L + + G YVLVL D +S FV L TS+ + + +++ G +++D HF+N+ + + LGA H F+ AY+ W+NGTVE +N EV+++ +A+++ER + +WP + VQ ALN+ +R+ G +P T
Sbjct: 360 MARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW-----GAGPPLEATRTAIRAARLAVVERVSPLEEADFVWPSEQEIRAVQQA-----AGAAAHPGVQWNEERQLQMTSTGQVWIPPDSGELQQRLCVVAHAGASGHRGAAATLKSLSTCFFWPTMGPDVTTFVNECLHCMVA-AGGRIPRPFGETLRATRPNEVLHFDFLTMIMSTSGVKYVLVLKDGMSGFVELLACTHATSDHAYQGLIDWFKRFGVVHQWVSDQGAHFRNQVVERLQRALGAHHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRMHVQDWPAVLPVVQAALNAMPADRLDGRSPLTAFT 702
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6G0RX23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RX23_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.010e-48 Identity = 121/337 (35.91%), Postives = 177/337 (52.52%), Query Frame = 1
Query: 55 FSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAV---VAPT-DADYSFPSMGEIRDRQDSYTDGK-------AGLDSPLGSVVRGGNGLYRVDYGGCPAERFLQVRLVCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLGDSD-GYAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMGA-TPFQLMT 1026
F YVI H+PG +N WG+LLSR + G+ S E+ V V +AV V+P D ++ +P+ EIR Q+ D+ VVR ++ A Q V AH +GH T L W M DV+ FV CLHC+ + G V PRP GE L T+ EVLHFD+L + + + G YVLVL D +S FV L S TS+ + +S+L+ G +++D HFKN+ + ++ LGA+H F+ AY+ W+NGTVE +N EV+++ +A+++ER + +WP + VQ ALN+ +R+G TP T
Sbjct: 3 FWYVIEHVPGEQNVWGDLLSRWGA---GSTASSEQAAVRVTRLAVIERVSPLEDPEFVWPTENEIRTLQELARSADPNDEHDATAYDADRRLVVRADGQVWIPS----TAVEMQQRLCVVAHAGASGHRGAQTTTTALSNLFYWRTMAADVSAFVAGCLHCMVTANGRV-PRPYGETLVATKPNEVLHFDFLTMIEGERGLKYVLVLKDGMSGFVELVACVSATSDQAYQSLLDWFKRFGVVHQWISDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFT 331
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Match: A0A6A4G7J8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G7J8_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.460e-47 Identity = 111/343 (32.36%), Postives = 176/343 (51.31%), Query Frame = 1
Query: 1 LSKSTSQRLLNWRTFMSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAVVAPT----DADYSFPSMGEIRDRQDSYTDGKAGLDSPLGSVVRGGNGLYRVDYGG----CPAERFLQVRLVCAHMQEAGHMDICATMHRLGAYCVWEGMKEDVTEFVQQCLHCVDSRAGNVIPRPLGEILHETEVGEVLHFDYLKLGDSDG-YAYVLVLVDDLSLFVSLQLAASCTSEVSARSILERVLVLGTP*VFMNDGAPHFKNETLNLVATKLGASHRFSVAYSSWSNGTVERMNLEVVRTFRAVMNERGRLLSEWPDSIFAVQFALNSAYRERMG 1002
+++ + +L W + F Y+I H+PG N WG+LLSR + G E V +AVV D ++ +PS EI+ QD+ + L+ G+ G L + G AE Q V AH +GH T L + W+ + DV FV +CLHC+ + +G IPRP GE L T+ ++LHFDYL + + DG YVLVL D +S +V L T++ + +++++ G +++D H +N+ + + LGA H F AY+ W+NGTVE +N E+++ +A+++ER + +WP + VQ ALNS +R+G
Sbjct: 1 MARYQADKLQRWALSLMSFQYIIEHVPGDVNVWGDLLSRWGA---GQVREDEHEATRVARLAVVERVSPLEDPEFVWPSETEIKAVQDAAREAAQDLE---GAQQTGERELMVMPSGQVWIPADAEDLRQRLCVIAHAGASGHRGAQTTQRALESVFYWKTLAVDVAAFVGECLHCMATASGR-IPRPFGETLVATKPNKILHFDYLSMVEGDGGVKYVLVLKDGMSGYVELVACLQATADTAYQALIDWFKRFGVVHQWVSDQGAHSRNQIVERLQRALGAQHHFVTAYTPWANGTVEVVNREILKCMKALLSERRLAIRDWPALLPVVQAALNSMPADRLG 336 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52291.12536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52291.12536.1 >prot_H-elongata_contig52291.12536.1 ID=prot_H-elongata_contig52291.12536.1|Name=mRNA_H-elongata_contig52291.12536.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp MSEFSYVIRHIPGAENHWGNLLSRLRSISGGAADSGEEVPVCVRSIAVVAback to top mRNA from alignment at H-elongata_contig52291:31..1059+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52291.12536.1 ID=mRNA_H-elongata_contig52291.12536.1|Name=mRNA_H-elongata_contig52291.12536.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1029bp|location=Sequence derived from alignment at H-elongata_contig52291:31..1059+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52291:31..1059+ >mRNA_H-elongata_contig52291.12536.1 ID=mRNA_H-elongata_contig52291.12536.1|Name=mRNA_H-elongata_contig52291.12536.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1404bp|location=Sequence derived from alignment at H-elongata_contig52291:31..1059+ (Himanthalia elongata Himel1 dioecious)back to top |