mRNA_H-elongata_contig5224.12526.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 1.160e-124 Identity = 206/362 (56.91%), Postives = 273/362 (75.41%), Query Frame = 2
Query: 200 YLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEG-REESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRIR 1282
Y +S R G+V R+ + IP+QS+KI+IV WQILTQF SVANVT+P+VY+ FLDG+D NFDL+WV SAGC F++DFHDRLL T+SP + + L TY + + E+ ++ + KHVS+ LL+TFL+YSSVSA LF+ F CEEL+D YLRADY+I+CDSSKH A Q YAGFM+++Y +GIPALYA LLF +RH L+D RE++ + S LWKPYKP Y+EVIECGRRV LAGVVVFI+PNTA QIA+TL +A AF++V+E +APF S+WDAW++RTGH ++F+SMY+ALLL+VDVS E A SQ+ +E++LVAAH CMILAV+ E ++ SL+ +++ +P R R
Sbjct: 890 YAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAES-LQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQR-QEPTTRFR 1249
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 2.450e-124 Identity = 212/362 (58.56%), Postives = 260/362 (71.82%), Query Frame = 2
Query: 185 LVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEGREESLA-VRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADP 1267
+ ++ Y VS E G RG+V R + +P+QS+KI+IV WQILTQF SVAN+ FP+VYQ FLD ++ NFDL WV SAGC F+VDFHDRLL TI+P + + L A Y R + E ++ V KHVS+ LL+TFLVY+SVSAVLFQ FACEELDD K YLRADY IECDS KH A Q YAGFMI+LY +GIPALY LF + LR E E LA + + LWKPY+P Y+EVIEC RRV LAGVVVFIYPNTA QIAV L IA F +++EA+AP+ S+WD W+ R GH ++ +SMYVALLL+VDVSDE ASSQ+ FE +LVAAH CM+ VL+E IM A+SL +K+ P
Sbjct: 606 VALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSED-LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQP 966
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 3.260e-120 Identity = 208/355 (58.59%), Postives = 268/355 (75.49%), Query Frame = 2
Query: 185 LVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEG--REESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLR 1243
+ + ++LVS E G RRG++HRV+KR+P+QS+KI++VVWQILTQF+SVANVT+P+VYQ FLDGV+ +NFD+ W+ SAGC EVDFH RLL TI P +A+ L TY V R++ E ++ +R KH+S+ LLITFLVYSSVSA +FQ FACE+LDD K YLRADY IECDSS+H A Q +AG MIL+YP+GIP Y LL+ +R L+ ++ R+ S V+ IS LW PYKP R Y+EVIEC RR+ L GVVVFIYPNTA Q+AVTL IA +F++ + +AP+ S+WDA IS GHVI+F SMY ALL +VDVSDE A SQ+ F +LVAAH CM++AV+VE I++ S R
Sbjct: 1404 IALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSS-GSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 399 bits (1026), Expect = 1.920e-119 Identity = 216/376 (57.45%), Postives = 279/376 (74.20%), Query Frame = 2
Query: 185 LVIILYLVSTE-GAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKE-GREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQ-VADPLPRIRPLSTLSQ 1303
+ ++ Y+ S E G G + GIV V + IP+QS+KI+IV WQILTQF SVANVT+P+VYQ LD +D NFDL+W+ SAGC +++FH RLL TISP +A+ L TY R + E + + KHV+V LL+TF VYSSVS+ LF+ FAC++LD K YLRADYSIEC+SS+H +Q YAGFMI++Y +GIPALYA LLF +R L+D++ REE V++IS LW+PYKP Y+EVIEC RRV LAGVVVFIYPNTA QIAVTL IA AF L++E +AP+ S+WD WISR GH+++F+SMYVALLL+VDVSDE ASSQ+ FE +LVA H CMIL VLVEA + A SLR +++ ++ PR R +L++
Sbjct: 1140 VAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEK-LNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSLTR 1514
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 387 bits (994), Expect = 1.840e-114 Identity = 205/383 (53.52%), Postives = 271/383 (70.76%), Query Frame = 2
Query: 155 GFVVLLS*WRLVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEGREESLAVRAIS--GLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQ-----VADPLPRIR 1282
G V+L++ ++ Y+ S E G RGIV RV + IP+QS+KI++V WQI+TQF +VANVT+P+VYQ FL+G++ NFDL+W+ SAGC +VDFHDRLL TI P A L TY +R + ET +++VR KHV + LL+TF VYSSVSA LF+ FACE L+D K YL ADY IECDSSKH + YAGFM+LLY GIPALY+ LLF +R L+ +E + L RA S LWKPYKP Y+EV+EC RRV LAGVVVFIYPN++ QIA+TL +A F+L++E +AP+ S+WD WI+R GHV++ SMY+ALLL+VDVS E +SSQ FE +LV AH M++ + E +++AL+LR +++ D LPR R
Sbjct: 1235 GLVLLVA-----VVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATET-LENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFR 1611
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 375 bits (963), Expect = 1.960e-113 Identity = 189/340 (55.59%), Postives = 251/340 (73.82%), Query Frame = 2
Query: 263 IPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHAL-RDKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRI 1279
+P+Q++KI++V WQI+TQF S ANVT+P+VYQ FL+G+D NFD++WV SAGC ++DFHDRLL TI P +A+ L ATY R + T++ V +HVS+ LL+ FLVYS VS+V+FQ FAC++L+ YLRADY IECDSSKH + YAGFMILLYP+GIPA Y +LL +R L +D +GRE+ V +IS LW+PY+P Y+EVIECGRR+ L G+VVFIYPNTA QIA+TL + F +++EA+ P+ WD W+SR H ++F+S+YVALLL+VDVS+E SSQK FE +LVAAH CMILAV+VE I++ R K+Q +P PR+
Sbjct: 672 LPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINR-GNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQ-DEPAPRV 1009
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 385 bits (989), Expect = 4.370e-113 Identity = 201/353 (56.94%), Postives = 258/353 (73.09%), Query Frame = 2
Query: 185 LVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHAL-RDKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSL 1240
+ ++ Y+VS + RG V R+ + IP+QS KI++V WQILTQF +VANVT+P+VYQ FLDG+ NFDL+WV SAGC VDFHDRLL TI P +A+ L TY R + ET ++ + +HVS+ LL+T VYSSVS+ LFQ FACE L D + YLRADY I CDSSKH ALQ YAG M+++Y +GIPALY LLF +R L R REE+ V + S LWKPYKP Y+EVIECGRRV LAGVVVFIYPNTA QIA+TL +A AF++V+E +AP+ S+WD W+SR GH ++F+SMYVALLL+VDVS+E SQ+ FEV+LVAAH CMIL +++E +++ +L
Sbjct: 1696 VAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATET-LQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 380 bits (976), Expect = 7.960e-113 Identity = 196/360 (54.44%), Postives = 256/360 (71.11%), Query Frame = 2
Query: 155 GFVVLLS*WRLVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALR-DKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMA 1231
G VL +V+I+Y++S E R ++ R+ +P+QS+KI+IV WQILTQFAS ANV +P VYQ FLDG+ FDL W+ SAGC ++ FH RLL TI P A+ L TY R + E ++ + KHV V LL+TFLVYSSVS+ LF+ FAC+EL+D K YLR DY IECDSSKH Q YAGFMILLYP+GIP LY+ LLF +R L+ DK R++S V++ S LW+PYKP Y+EVIECGRR+ L G+VVFIYPNTA Q+A+TL +A F L++EA++P+ S+W+ W++R GHV++ +SMYVALLL+VDVSDE A SQ FE +LV H CMIL+V+VE ++A
Sbjct: 1046 GMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEK-LRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 368 bits (945), Expect = 1.880e-109 Identity = 196/362 (54.14%), Postives = 250/362 (69.06%), Query Frame = 2
Query: 200 YLVSTEG-AGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALR-DKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRI 1279
Y++S + G G+V R+ + IP+QS+KI+IV WQILTQF SVANVT+P+VYQ FLD +D NFDL+WVFS GC F++DFHDRLL TISP +A+ L T R + + +V QKHVS+ LL+TFLVYS+VS+VLFQ FACEEL D K YLR+DY IECDSS H A Q YAGFMI+LYP+GIPALYA LLF +R LR D+ RE+ V + S LW+PYKP Y+E+ AVTL IA AF +++EA+ P+ S+WDAW SR GH+++ +SMYVALLL+VDVSDE ASSQ+ FE ILVA H CM+ V+VE I++++SLR K+ P PR+
Sbjct: 862 YIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPRL 1199
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 368 bits (944), Expect = 4.340e-108 Identity = 191/360 (53.06%), Postives = 252/360 (70.00%), Query Frame = 2
Query: 155 GFVVLLS*WRLVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALR-DKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMA 1231
G V+ +V+I Y++S E R + R+ +P+QS+KI+IV WQI+TQFAS ANV +P VYQ F+DG+ FDL W+ S GC ++DFH RLL TI P A+ L TY R + E ++ + KHV V LL+TFLVYSSVS+ LF+ FAC+EL+D YLR DY IECDSSKH Q YAGFMILLYP+GIP LY+ LLF +R L+ DK R +S V++ S LW+PYKP Y+EVIECGRRV L G++VFIYPNTA Q+A+TL +A F L++EA++P+ S+W+ W++R GHV++ +S+YVALLL+VDVSDE A SQ FE +LV H CMIL+V+VE ++A
Sbjct: 1106 GLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEK-LRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1463 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5224.12526.1 >prot_H-elongata_contig5224.12526.1 ID=prot_H-elongata_contig5224.12526.1|Name=mRNA_H-elongata_contig5224.12526.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp MKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWback to top mRNA from alignment at H-elongata_contig5224:22..3785- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5224.12526.1 ID=mRNA_H-elongata_contig5224.12526.1|Name=mRNA_H-elongata_contig5224.12526.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3764bp|location=Sequence derived from alignment at H-elongata_contig5224:22..3785- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5224:22..3785- >mRNA_H-elongata_contig5224.12526.1 ID=mRNA_H-elongata_contig5224.12526.1|Name=mRNA_H-elongata_contig5224.12526.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2142bp|location=Sequence derived from alignment at H-elongata_contig5224:22..3785- (Himanthalia elongata Himel1 dioecious)back to top |