prot_H-elongata_contig52215.12521.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52215.12521.1
Unique Nameprot_H-elongata_contig52215.12521.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: D8LHU2_ECTSI (2-isopropylmalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU2_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.020e-49
Identity = 86/98 (87.76%), Postives = 92/98 (93.88%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDTNIRRYELVGMHV 98
            DGVLKNKETYEIMDA LVGL QDTSLVLGKHSGRHA RSRL++ GYSLTDD+LNRAF+RFKDLADKKKEI++LDLASIVNDEIRD NIRRYELVGM V
Sbjct:  295 DGVLKNKETYEIMDAELVGLHQDTSLVLGKHSGRHAFRSRLQETGYSLTDDELNRAFLRFKDLADKKKEITSLDLASIVNDEIRDVNIRRYELVGMQV 392          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: A0A6H5KEF6_9PHAE (2-isopropylmalate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF6_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 7.620e-49
Identity = 86/98 (87.76%), Postives = 92/98 (93.88%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDTNIRRYELVGMHV 98
            DGVLKNKETYEIMDA LVGL QDTSLVLGKHSGRHA RSRL++ GYSLTDD+LNRAF+RFKDLADKKKEI++LDLASIVNDEIRD NIRRYELVGM V
Sbjct:  439 DGVLKNKETYEIMDAELVGLYQDTSLVLGKHSGRHAFRSRLQESGYSLTDDELNRAFLRFKDLADKKKEITSLDLASIVNDEIRDVNIRRYELVGMQV 536          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: A0A835YKD7_9STRA (2-isopropylmalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.130e-34
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRD-TNIRRYELVGMHV 98
            DGVLKNKETYEIMDA LVG+ Q+++LVLGKHSGRHA RSRL + GY+L DD+LN+AF RFKDLADKKKEIS LDL SIVN+E+R+ T    + L G+ V
Sbjct:  353 DGVLKNKETYEIMDAALVGVVQESNLVLGKHSGRHAFRSRLAEMGYTLADDELNKAFARFKDLADKKKEISVLDLESIVNEEMREATGHIAFALRGVQV 451          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: B5W9X6_LIMMA (LeuA allosteric (Dimerisation) domain n=1 Tax=Limnospira maxima CS-328 TaxID=513049 RepID=B5W9X6_LIMMA)

HSP 1 Score: 116 bits (290), Expect = 7.120e-30
Identity = 58/95 (61.05%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDT-NIRRYELV 94
            DGVLKNK TYEIMDA  +GL  D  +VLGKHSGRHA ++RL++ G+ L+DD++N+AF+RFKD+ADKKKE++  D+ +IVNDEI+ T  + R ELV
Sbjct:   55 DGVLKNKLTYEIMDAQSIGLN-DNLIVLGKHSGRHAFQNRLQELGFDLSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV 148          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: UPI001C402318 (2-isopropylmalate synthase n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C402318)

HSP 1 Score: 120 bits (300), Expect = 9.590e-30
Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIR 84
            DG+LKNK TYEIMDA  +GL  D +LVLGKHSGR+A RSRL++ GY L+DDDLNRAF+RFKDLADKKK +S  DL +IVNDE+R
Sbjct:  321 DGLLKNKNTYEIMDAQSIGLT-DNTLVLGKHSGRNAFRSRLEELGYQLSDDDLNRAFLRFKDLADKKKTVSDWDLEAIVNDELR 403          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: A0A7S0VM37_9CRYP (2-isopropylmalate synthase n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VM37_9CRYP)

HSP 1 Score: 119 bits (299), Expect = 2.040e-29
Identity = 56/98 (57.14%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDTNIRRYELVGMHV 98
            DG+LKNK TYEI+DA+ +GL+++  +VLGKHSGR A RSRL + G  L+DD+LN+AF+RFK++ADKKKEI+ +D+ SIV DE +DT + R++L  + V
Sbjct:  414 DGMLKNKLTYEIVDASTIGLEKNDGIVLGKHSGRAAFRSRLTELGIELSDDELNKAFVRFKEVADKKKEITNMDIESIVGDEAQDTTLDRFKLKHVQV 511          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: M2XVI5_GALSU (2-isopropylmalate synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVI5_GALSU)

HSP 1 Score: 119 bits (298), Expect = 2.890e-29
Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIR 84
            DG+LKN+ TYEIMDA L+G+Q++  LVLGKHSGRHA R RL + G+ LT+D+LNRAF+RFK+LADKKKE++  DL SIVNDE+R
Sbjct:  443 DGILKNRLTYEIMDARLIGMQEN-QLVLGKHSGRHAFRKRLGELGFDLTEDELNRAFVRFKELADKKKEVTLWDLESIVNDEVR 525          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: A0A0R0M3B4_9CYAN (2-isopropylmalate synthase n=17 Tax=Aphanizomenonaceae TaxID=1892259 RepID=A0A0R0M3B4_9CYAN)

HSP 1 Score: 118 bits (295), Expect = 4.550e-29
Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDT-NIRRYELV 94
            DGVLKNK TYEIMDA  +GL  D  +VLGKHSGR+A RSRLK+ G+ L+++DLNRAFIRFKD+ADKKKEIS  DL +IVNDEI+   ++ + ELV
Sbjct:  319 DGVLKNKLTYEIMDAQSIGLT-DNQIVLGKHSGRNAFRSRLKELGFELSENDLNRAFIRFKDVADKKKEISDWDLEAIVNDEIKQVPDLFKIELV 412          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: UPI001F0E4849 (2-isopropylmalate synthase n=1 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=UPI001F0E4849)

HSP 1 Score: 118 bits (295), Expect = 4.550e-29
Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDT-NIRRYELV 94
            DGVLKNK TYEIMDA  +GL  D  +VLGKHSGR+A RSRLK+ G+ L+++DLNRAFIRFKD+ADKKKEIS  DL +IVNDEI+   ++ + ELV
Sbjct:  319 DGVLKNKLTYEIMDAQSIGLT-DNQIVLGKHSGRNAFRSRLKELGFELSENDLNRAFIRFKDVADKKKEISDWDLEAIVNDEIKQVPDLFKIELV 412          
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Match: K9XN99_STAC7 (2-isopropylmalate synthase n=3 Tax=Pleurocapsales TaxID=52604 RepID=K9XN99_STAC7)

HSP 1 Score: 118 bits (295), Expect = 4.690e-29
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    1 DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTDDDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDT-NIRRYELV 94
            DGVLKNK TYEIMDA L+GL  D  ++LGKHSGR+A RSRLK+ GY L + +LN+AF+RFKD+ADKKKEIS  DL +IVNDEIR    + R ELV
Sbjct:  319 DGVLKNKLTYEIMDAQLIGLT-DNQIILGKHSGRNAFRSRLKELGYELNEVELNKAFVRFKDVADKKKEISDWDLEAIVNDEIRQPPELFRLELV 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52215.12521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU2_ECTSI1.020e-4987.762-isopropylmalate synthase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KEF6_9PHAE7.620e-4987.762-isopropylmalate synthase n=1 Tax=Ectocarpus sp. ... [more]
A0A835YKD7_9STRA2.130e-3469.702-isopropylmalate synthase n=1 Tax=Tribonema minus... [more]
B5W9X6_LIMMA7.120e-3061.05LeuA allosteric (Dimerisation) domain n=1 Tax=Limn... [more]
UPI001C4023189.590e-3071.432-isopropylmalate synthase n=1 Tax=Anthocerotibact... [more]
A0A7S0VM37_9CRYP2.040e-2957.142-isopropylmalate synthase n=2 Tax=Hemiselmis TaxI... [more]
M2XVI5_GALSU2.890e-2967.862-isopropylmalate synthase n=1 Tax=Galdieria sulph... [more]
A0A0R0M3B4_9CYAN4.550e-2966.322-isopropylmalate synthase n=17 Tax=Aphanizomenona... [more]
UPI001F0E48494.550e-2966.322-isopropylmalate synthase n=1 Tax=Cylindrospermop... [more]
K9XN99_STAC74.690e-2966.322-isopropylmalate synthase n=3 Tax=Pleurocapsales ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.260coord: 1..94
e-value: 1.3E-22
score: 82.2
NoneNo IPR availablePANTHERPTHR10277:SF612-ISOPROPYLMALATE SYNTHASE 1, CHLOROPLASTIC-RELATEDcoord: 1..88
NoneNo IPR availablePANTHERPTHR10277HOMOCITRATE SYNTHASE-RELATEDcoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52215contigH-elongata_contig52215:214..998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52215.12521.1mRNA_H-elongata_contig52215.12521.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52215 214..998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52215.12521.1 ID=prot_H-elongata_contig52215.12521.1|Name=mRNA_H-elongata_contig52215.12521.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
DGVLKNKETYEIMDANLVGLQQDTSLVLGKHSGRHALRSRLKDEGYSLTD
DDLNRAFIRFKDLADKKKEISTLDLASIVNDEIRDTNIRRYELVGMHV
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