mRNA_H-elongata_contig115824.1252.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: D7FQK5_ECTSI ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK5_ECTSI) HSP 1 Score: 226 bits (577), Expect = 2.320e-70 Identity = 103/143 (72.03%), Postives = 117/143 (81.82%), Query Frame = 1
Query: 1 QGIHDMTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSDKTTSWRNAR-----GNADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAVR 414
Q IH+MTEPK+TTTWGAG SFSKCHAERRVPYDPNLD+IFDGEEFSKM RLWTNGYDVYTPRRG + HDYSH +TTSWR+ + G DR++ ANQRLWNLMEMP ++ G +EVQ PWGLGDRR+LD+FIEFT R
Sbjct: 289 QAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPRSSKEGSKEVQGDPWGLGDRRTLDEFIEFTGTR 431
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A6H5L6U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U7_9PHAE) HSP 1 Score: 226 bits (576), Expect = 1.500e-68 Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 1
Query: 1 QGIHDMTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSDKTTSWRNAR-----GNADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
+ IH+MTEPK+TTTWGAG SFSKCHAERRVPYDPNLD+IFDGEEFSKM RLWTNGYDVYTPRRG + HDYSH ++TTSWR+ + DR++ ANQRLWNLMEMP +E GR EVQ PWGLGDRR+LD+FIEFT V
Sbjct: 249 RAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHEQTTSWRSNKKVDGDDGKDRQRLANQRLWNLMEMPLSSEEGRREVQGDPWGLGDRRTLDEFIEFTGV 390
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A836CB83_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB83_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.320e-42 Identity = 74/136 (54.41%), Postives = 93/136 (68.38%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSDKTTSWRNARGN--ADRKKAANQRLWNLMEMPG--FTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
MT+PK+TTTW AGLSFSKCH+ R VPYDP L Q+FDGEEFS RL+TNGYDVYTP + + HDY+ + W A G A +K ++ RLW L+EMPG T GR+ VQ GP+GLG R+LDQ ++F +
Sbjct: 216 MTQPKLTTTWAAGLSFSKCHSMRAVPYDPYLPQVFDGEEFSYFARLFTNGYDVYTPTKTYIGHDYNGANNPNAHGWYVATGRDRAAEEKMSDMRLWTLLEMPGGDSTPEGRQAVQFGPFGLGTARTLDQLMDFAMI 351
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A7S3UP91_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UP91_HETAK) HSP 1 Score: 140 bits (354), Expect = 1.370e-39 Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSDKTTSWRNA-RGNADRKKA-ANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
++ PK+ + W AG SF +CH ER+VPYDP L IFDGEEFS+ RLWT GYD YTP R +V HDY+ + WRN + N ++ KA + QR+++L+EMP T AG+ + G +GLGDRRSL Q+ F V
Sbjct: 17 LSRPKLGSLWAAGFSFMRCHGERQVPYDPQLPNIFDGEEFSRSARLWTRGYDFYTPHRPVVVHDYNKPKDYNPQGWRNNNQQNKEKDKARSRQRIFDLLEMPEGTSAGKAAL--GKYGLGDRRSLAQYEAFVGV 148
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A7S3UUL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUL0_HETAK) HSP 1 Score: 142 bits (359), Expect = 2.120e-38 Identity = 66/135 (48.89%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSD-KTTSWRNARGNADRK--KAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
++EPK+TT W AGLSF KCH ER PYDPNL IFDGEE++K +RL+T+GYD+YTP R V+HDYSH ++D + +W RK KA+ +R+ L+EM ++ + + G +GLG +R++DQ+I FT V
Sbjct: 35 LSEPKLTTVWAAGLSFLKCHGERLTPYDPNLPGIFDGEEYTKGIRLFTHGYDMYTPHRSYVYHDYSHAKTDGRAHTW-------SRKTVKASQERIMTLLEMNEGDKSAEAKAKLGKYGLGPKRTIDQYINFTGV 162
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: F0Y7S9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7S9_AURAN) HSP 1 Score: 143 bits (360), Expect = 2.030e-37 Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSDKTTSWRNARGN---------ADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
+ +PK+TT W AGLSFS+CHAER VPYDP+ IF GEEFS+ R +TNGYD+YTP R IV HDY H Q D + N +G ++ AAN+R+W L+ MPG + G +GLGD+RSLD + FT +
Sbjct: 244 LEKPKLTTLWAAGLSFSRCHAERAVPYDPHTPYIFWGEEFSRTARFFTNGYDIYTPPRTIVAHDYKHTQGDPSHFKWNGKGGPRLNQNKTIVAQRDAANRRIWTLLGMPGGDPDPAARRRLGAYGLGDKRSLDDLVAFTGI 384
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: I2CPM0_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPM0_NANGC) HSP 1 Score: 137 bits (344), Expect = 4.090e-37 Identity = 63/133 (47.37%), Postives = 80/133 (60.15%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSD-KTTSWRNARGNADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
+T PKMT+TW AG +F+KCHA++R PYDP+L +FDGEEFSK RLWT GYDVYTP R +V+HDY+H S SW +R + + L P W LG+RRSL+Q I+FT V
Sbjct: 65 LTRPKMTSTWAAGFAFNKCHADKRTPYDPHLPSLFDGEEFSKFARLWTRGYDVYTPHRSVVYHDYNHGPSTVAAASWTRDGKELERSRNRLKVLLGDSTAPLARNTSEAHAFLARWDLGNRRSLEQLIQFTGV 197
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A7S2TJQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJQ0_9EUKA) HSP 1 Score: 135 bits (341), Expect = 7.600e-36 Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHK---QSDKTTSWRNARGNADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
+ P ++ TW AG SF+KCH ER VP DP L+ +FDGEEFS+MLRLWT+GYDVYTP R +VFHDY+H Q + ++W GN A +R ++L++ + G E+V GP+GLG R++DQ++EF +
Sbjct: 92 LPRPHLSFTWAAGWSFAKCHFERVVPNDPYLEGMFDGEEFSRMLRLWTHGYDVYTPHRPVVFHDYTHFRPWQKGRESTWN---GNPPGLNYALKRYFSLVD-----KQGAEKVDLGPYGLGKERTIDQYVEFAGI 218
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A7S3YPG9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPG9_9EUKA) HSP 1 Score: 137 bits (344), Expect = 3.290e-35 Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 16 MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHK---QSDKTTSWRNARGNADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTAV 411
+ P ++ TW AG SF+KCH ER VP DP L+ +FDGEEFS+MLRLWT+GYDVYTP R +VFHDY+H Q + ++W GN A +R ++L++ + G E+V GP+GLG +R++DQ+IEF+ +
Sbjct: 274 LPRPHLSFTWAAGWSFAKCHFERVVPNDPYLEGMFDGEEFSRMLRLWTHGYDVYTPHRPVVFHDYTHFRPWQKGRESTWN---GNPPGLSYALKRYFSLVD-----KQGAEKVDLGPYGLGKQRTIDQYIEFSGI 400
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Match: A0A7S3YLX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLX0_HETAK) HSP 1 Score: 136 bits (342), Expect = 6.440e-35 Identity = 65/136 (47.79%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 1 QGIHDMTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGYDVYTPRRGIVFHDYSHKQSDKTTSWRNARGNADRKKAANQRLWNLMEMPGFTEAGREEVQQGPWGLGDRRSLDQFIEFTA 408
+G ++T PK+T W AG SF KCH E++ P DP L IFDGEE+SK RLWT GYD+YTP + ++FHDY+ + SW R N D +A RL+ L+EM G G +GLGDRRSLDQ+I+F+
Sbjct: 223 KGAINLTRPKLTPFWAAGFSFLKCHGEKQTPNDPQLPGIFDGEEYSKGARLWTRGYDIYTPHKALIFHDYNKPKDYDAMSW--GRPNKDFNRAK-LRLFTLLEMLGGENTTEAISALGRYGLGDRRSLDQYIKFSG 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115824.1252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115824.1252.1 >prot_H-elongata_contig115824.1252.1 ID=prot_H-elongata_contig115824.1252.1|Name=mRNA_H-elongata_contig115824.1252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp MTEPKMTTTWGAGLSFSKCHAERRVPYDPNLDQIFDGEEFSKMLRLWTNGback to top mRNA from alignment at H-elongata_contig115824:6..1611- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115824.1252.1 ID=mRNA_H-elongata_contig115824.1252.1|Name=mRNA_H-elongata_contig115824.1252.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1606bp|location=Sequence derived from alignment at H-elongata_contig115824:6..1611- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115824:6..1611- >mRNA_H-elongata_contig115824.1252.1 ID=mRNA_H-elongata_contig115824.1252.1|Name=mRNA_H-elongata_contig115824.1252.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig115824:6..1611- (Himanthalia elongata Himel1 dioecious)back to top |