prot_H-elongata_contig52205.12519.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52205.12519.1
Unique Nameprot_H-elongata_contig52205.12519.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig52205.12519.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.120e-18
Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 0
Query:    1 MKRIQHQD-ICSHEGCDRETEVGPMSRPGEVDLFCSDHHNPAIIVTRTEHCQFFGC----GK--------TPKYGQRQGLLSFCQLHKRAGMYTNRNGQLLVAT 91
            M R+QH    C  +GC+ E +V  M R G +  FC+ H  P +++ +   C+ F C    GK        TP+YG   G L+FC+ HKRAGMYT R+G L VAT
Sbjct:   62 MLRVQHDHKTCGADGCNGEADVHYMGRDGRIHRFCARHKEPVVVLEQAVQCEVFHCCGFDGKDMHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGMLYVAT 165          
BLAST of mRNA_H-elongata_contig52205.12519.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.640e-16
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   15 CDRETEVGPMSRPGEVDLFCSDHHNPAIIVTRTEHCQFFGCGKTPKYGQRQGLLSFCQLHKRAGMYTNRNGQLLVAT 91
            C  E +V  M R G +  FC+ H  P +++ +   CQ   C  TP+YG   G L+FC+ HKRAGMYT R+G L VAT
Sbjct:   47 CTEEADVHYMGRDGRIHRFCTRHKEPVVVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVAT 123          
BLAST of mRNA_H-elongata_contig52205.12519.1 vs. uniprot
Match: A0A6H5JZ47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ47_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.790e-14
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   20 EVGPMSRPGEVDLFCSDHHNPAIIVT---RTEHCQFFGCGKTPKYGQRQGLLSFCQLHKRAGMYTNRNGQLLVAT 91
            E    S+ G +   C +   PA  V    R + C++ GC  TP+YG R GL SFCQ HKRAGMYT R+G+L +AT
Sbjct:   71 EDNQTSQDGLIHRVCVEDKGPAQSVATMRRAQRCEYAGCDGTPRYGPRNGLQSFCQGHKRAGMYTYRSGELFMAT 145          
BLAST of mRNA_H-elongata_contig52205.12519.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 5.410e-13
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   15 CDRETEVGPMSRPGEVDLFCSDHHNPAIIVTRTEHCQFFGCGKTPKYGQRQGLLSFCQLHKRAGMYTNRNGQLLVAT 91
            C+R  E   + + G V            + +RTE+C+  GC +TP+YG++ G L+ CQ HKRAG+YT R+G LLVAT
Sbjct:  149 CERGVEESRLPQDGGVISPPRTEDKKPAVASRTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVAT 225          
BLAST of mRNA_H-elongata_contig52205.12519.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.350e-11
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   14 GCDRETEVGPMSRPGEVDLFCSDHHNPAIIVTRTEHCQFFGCGKTPKYGQRQGLLSFCQLHKRAGMYTNRNGQLLVAT 91
            GC+R  E   + + G V            + +RTE+C+  GC +  +YG++ G L  CQ HKRAG+YT R+G LLVAT
Sbjct:  141 GCERGVEENRLVQDGGVISPPRTEDKKLAVTSRTEYCKHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVAT 218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52205.12519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KF29_9PHAE2.120e-1841.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH38_ECTSI1.640e-1645.45EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JZ47_9PHAE2.790e-1446.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G084_ECTSI5.410e-1342.86Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KL62_9PHAE1.350e-1141.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52205contigH-elongata_contig52205:2689..3441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52205.12519.1mRNA_H-elongata_contig52205.12519.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52205 2689..3453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52205.12519.1 ID=prot_H-elongata_contig52205.12519.1|Name=mRNA_H-elongata_contig52205.12519.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MKRIQHQDICSHEGCDRETEVGPMSRPGEVDLFCSDHHNPAIIVTRTEHC
QFFGCGKTPKYGQRQGLLSFCQLHKRAGMYTNRNGQLLVAT
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