mRNA_H-elongata_contig5218.12512.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: D8LDX8_ECTSI (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX8_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 6.140e-129 Identity = 217/305 (71.15%), Postives = 243/305 (79.67%), Query Frame = 1
Query: 1 RQRAAGNLHVVTTDPNHNRIRTAHKKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NMDVIPRSVHA--DLQQGKPLIPADV-----------EELQDILAGSSQKSKVVLREDARRGMVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVTSSS 876
R++A+GNLHVV T+P+HNRIR AHKK RT+QYDHVFGPFASQEEVF TVEPIVREMLQGFSTTVFA G TGTGK HTMEGDI+S M VIPRSVHA D G I AD EEL D+LA S KSKVVLRED++RG+VCCGLEEVQV++AK++F IL KGI+QR+TAATLM+KNSSRSHSIFT+KIMIKEC PDG+EVMRNGQLNLVDLAG ECVGRSGAK A+E G++NQ+LLTLGRVI P HVPYRD+KLTRLL+ESLGGRAK CIIATVTSSS
Sbjct: 24 REKASGNLHVVNTEPSHNRIRVAHKKLDRTYQYDHVFGPFASQEEVFVSTVEPIVREMLQGFSTTVFAYGQTGTGKTHTMEGDITSAEGMGVIPRSVHAIFDYLDG---ISADYTVRTSFLELYNEELADLLADGSSKSKVVLREDSKRGVVCCGLEEVQVLTAKDIFNILGKGIQQRKTAATLMNKNSSRSHSIFTLKIMIKECMPDGQEVMRNGQLNLVDLAGSECVGRSGAKNVRAREAGNINQSLLTLGRVITALVEHHP--------HVPYRDSKLTRLLQESLGGRAKTCIIATVTSSS 317
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A836CEW9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW9_9STRA) HSP 1 Score: 304 bits (778), Expect = 2.640e-90 Identity = 168/288 (58.33%), Postives = 204/288 (70.83%), Query Frame = 1
Query: 85 RTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NMDVIPRSVHADLQQGKPLIPADV-----------EELQDIL-------------AGSSQKSKVVLREDARRGMVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVTSSS 876
R++ YD VFGP+A+QEEVF TV+PIV EMLQGF+ TVFA G TGTGK +TMEG+++ NM +IPRSVH +Q + L AD EEL D+L A +Q VVLRE G+ CGLEEVQV+ A ++F IL++GI+QR+TAATLM+KNSSRSHSIFT+KIMIKE PDG+EVMRNGQLNLVDLAG ECVGRSGA A+E G++NQ+LLTLGRVI P H+PYRD+KLTRLL+ESLGGRA+ C+IAT+TSSS
Sbjct: 3 RSYIYDKVFGPYATQEEVFDQTVKPIVGEMLQGFNCTVFAYGQTGTGKTYTMEGELTDADNMGIIPRSVHTIFEQLESL-QADYTVRVSFLELYNEELADLLVDGTKGKPPAGPGAKGAQAGGVVLRESRTGGVTVCGLEEVQVLDAPDIFRILERGIQQRRTAATLMNKNSSRSHSIFTLKIMIKELLPDGQEVMRNGQLNLVDLAGSECVGRSGATQNRAREAGNINQSLLTLGRVITALVEHHP--------HIPYRDSKLTRLLQESLGGRARTCLIATITSSS 281
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A812SSK3_SYMMI (Kinesin-like protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SSK3_SYMMI) HSP 1 Score: 261 bits (667), Expect = 1.210e-79 Identity = 147/264 (55.68%), Postives = 182/264 (68.94%), Query Frame = 1
Query: 130 EEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NMDVIPRSVHADLQQGKP----------LIPADVEELQDILA------GSSQKSKVVLREDARRGMVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVTSS 873
EEVF V PIV E L GF+ T+FA G TGTGK HTMEGDI N VIPR+V + L++ + + EELQD+LA GS+ ++ L EDA++G+VC LEE+ V+ ++F IL+KGI+QRQTAATL +KNSSRSHSIFT+KIMIKE +GEEV+R+GQLNLVDLAG ECVGRSGA A A+E G +NQ+LLTLGRVI H+PYRD+KLTR+L+ESLGGRAK CIIAT++ S
Sbjct: 1 EEVFQSMVLPIVEETLAGFNCTIFAYGQTGTGKTHTMEGDIHCEENAGVIPRAVRSILEKLESAGSEFTIRVSFLELYNEELQDLLATDSNTPGSTDDKRLRLCEDAKKGVVCQNLEEITVLDVHHLFEILQKGIKQRQTAATLCNKNSSRSHSIFTLKIMIKETNVEGEEVVRHGQLNLVDLAGSECVGRSGATNARAREAGSINQSLLTLGRVITALVDHHG--------HIPYRDSKLTRILQESLGGRAKTCIIATLSPS 256
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A4D9DG63_9STRA (Kinesin motor domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG63_9STRA) HSP 1 Score: 257 bits (657), Expect = 3.680e-73 Identity = 147/320 (45.94%), Postives = 193/320 (60.31%), Query Frame = 1
Query: 16 GNLHVVTTDPNHNRIRTAH----KKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NMDVIPRSV----------HADLQQGKPLIPADVEELQDIL----------------------AGSSQKSKVVLREDARRGMVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVT 867
G + +V+TD +++ + KK + F YD VFG FA+QE+VF TV P+V E+L GFS T FA G TGTGK HTMEG + SP +IPR++ AD + E L+D+L AG + + L ED R+G+ GLE+V A + +L++G+ RQTAATL +KNSSRSHS+FT+K++IKE GEE +R GQLNLVDLAG EC+GRSGAK A+E G++NQ+LLTLGR C +G PH+PYRD+KLTRLL+ESLGGRAK CIIAT++
Sbjct: 31 GFVPIVSTDTERRQVKINYGQGLKKITKNFHYDRVFGRFATQEDVFKHTVAPMVDEVLAGFSCTAFAYGQTGTGKTHTMEGVLDSPKGYGIIPRAILSIFEKLNTCAADFTVRVSYLEIYQENLEDLLEASPHGLGAGSKALTGGTHGAVAGGGKSKGLRLMEDVRKGVQVLGLEDVNCRDAASTVALLQRGVTNRQTAATLCNKNSSRSHSVFTLKVVIKETNGSGEEEVRAGQLNLVDLAGSECIGRSGAKNERAREAGNINQSLLTLGR-----CITALTEGH---PHIPYRDSKLTRLLQESLGGRAKTCIIATLS 342
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A2R5GEC2_9STRA (Kinesin-like protein KIF11 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEC2_9STRA) HSP 1 Score: 251 bits (642), Expect = 4.180e-71 Identity = 131/280 (46.79%), Postives = 193/280 (68.93%), Query Frame = 1
Query: 73 KKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NMDVIPRSVHADLQQGKPLIPADV-----------EELQDILAGSSQKSKVVLREDARRG--MVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVTSS 873
K++++ + YD VFGP+++Q EV++ + P+V E+LQG++ TVFA G TGTGK TMEG++ P +IPR+V + Q+ + + A+ EELQD+L+ + +K +L + +R G + C LEE+ V + +F +++ + +R T T ++KNSSRSHSIFT+ + I+E TP+GE++++ G+LNLVDLAG EC+GRSGA+ A A+E G++N++LLTLGRVI +KT PH+PYRD+KLTRLL+ESLGGRAK CIIATV S
Sbjct: 55 KRSSKKYNYDMVFGPYSTQAEVYSSAIRPVVDEVLQGYNCTVFAYGQTGTGKTFTMEGNVDDPELQGMIPRAVDSIFQRLEAIDDAEYTIKVSFLELYNEELQDLLSVTDEKRLRILDDKSRMGTGVSCHNLEEIMVKNTDEIFEVMRTAMAKRATGETKLNKNSSRSHSIFTLTLHIRETTPEGEDLLKVGKLNLVDLAGSECIGRSGAQNARAREAGNINKSLLTLGRVI-------SALVEKT-PHIPYRDSKLTRLLQESLGGRAKTCIIATVAPS 326
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A662X225_9STRA (Kinesin motor domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X225_9STRA) HSP 1 Score: 249 bits (635), Expect = 3.940e-70 Identity = 145/300 (48.33%), Postives = 196/300 (65.33%), Query Frame = 1
Query: 1 RQRAAGNLHVVTTDPNHNRIRTAHKKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NM-DVIPRSVHA----------DLQQGKPLIPADVEELQDILAGSSQKSKVVLREDARRGMVCC-GLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATV 864
R++AAG +V PN N + +KT + +D VFG +++Q++VF V P V E L G++ TVFA G TGTGK +TM+GD++ M VIPRSV + + EEL+D+L + +K K+ L EDA+RG V C L EV +AK+++ ++ G++ R T+ TLM++NSSRSHSIFT++I KE +P GE+++R GQLNLVDLAG ECVGRSGA+ A A+E G +NQ+LLTLGRVI + LPHVPYRD+KLTRLL+ESLGGRAK IIAT+
Sbjct: 36 REKAAGRGAIVQCKPNANEVAVVKRKT---YHFDRVFGQYSTQKDVFQAVVRPAVDEALAGYNCTVFAYGQTGTGKTYTMQGDLTPDHEMAGVIPRSVRCIFDALEASGEEFSVRVSFLQLYNEELKDLLDPNEEK-KLRLMEDAKRGGVYCQNLLEVTATTAKHVYGLVNTGVKNRITSETLMNENSSRSHSIFTIRIHSKEHSPAGEDLLRVGQLNLVDLAGSECVGRSGARNARAREAGTINQSLLTLGRVITALVDN--------LPHVPYRDSKLTRLLQESLGGRAKTTIIATL 323
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A0W8D8B6_PHYNI (Kinesin-like protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D8B6_PHYNI) HSP 1 Score: 241 bits (616), Expect = 5.110e-70 Identity = 142/300 (47.33%), Postives = 194/300 (64.67%), Query Frame = 1
Query: 1 RQRAAGNLHVVTTDPNHNRIRTAHKKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDIS-SP*NMDVIPRSVHA--DLQQGK--------PLIPADVEELQDILAGSSQKSKVVLREDARRGMV-CCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATV 864
R++AAG VV P+ N + +KT + +D VFG +++Q++VFT V P V E L G++ TVFA G TGTGK +TM+GD+S +IPRSV D + + + EEL+D+L + K K+ L ED +RG + C L E+ +AK+++ ++ G++ R T+ TLM++NSSRSHSIFT++I KE GE+++R GQLNLVDLAG ECVGRSGA+ A A+E G +NQ+LLTLGRVI + LPHVPYRD+KLTRLL+ESLGGRAK IIAT+
Sbjct: 40 REKAAGRGAVVQCKPHSNELAVVKRKT---YTFDRVFGQYSTQKDVFTSVVRPAVDEALAGYNCTVFAYGQTGTGKTYTMQGDLSPGSETAGIIPRSVRCIFDALEARGEEFSVRVSFLQLYNEELKDLLDPDTDK-KLRLMEDVKRGGIYCMNLLEITATTAKHVYELVNTGVKNRITSETLMNENSSRSHSIFTIRIHSKEHNAAGEDLLRVGQLNLVDLAGSECVGRSGARNARAREAGTINQSLLTLGRVITALVDN--------LPHVPYRDSKLTRLLQESLGGRAKTTIIATL 327
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A7S2SKK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SKK6_9STRA) HSP 1 Score: 248 bits (633), Expect = 7.470e-70 Identity = 137/307 (44.63%), Postives = 200/307 (65.15%), Query Frame = 1
Query: 4 QRAAGNLHVVTTDPNHNRIRTA----HKKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISSP*NMDVIPRSVHADLQQGKPLIPADV-----------EELQDILAGSSQKSKVVLREDARR--GMVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVTSS 873
++A+ +V D + N++ A K+T++ + +D VFG +++Q EV+ + P+V E+L GF+ TVFA G TGTGK +TMEG++ P M +IPR+ + L A+ EELQD+L+ + + +L + +R G+ C LEEV V SA+++ T +KK + +RQT T ++K SSRSH IFT+ + ++E TP+GE++++ G+LNLVDLAG EC+GRSGAK A+E G++N++LLTLGRVI +KT PH+PYRD+KLTRLL+ESLGGRAK CIIATV S
Sbjct: 25 EKASKTPSLVHCDQDKNQVNVAMTLGSKRTSKAYNFDMVFGQYSTQAEVYNAAIRPVVEEVLGGFNCTVFAYGQTGTGKTYTMEGNVDDPDYMGMIPRACSSLFDALDRLDGAEYTVKVSFLELYNEELQDLLSSTDEARLRILDDKSRMNTGVACHNLEEVMVTSAEDILTQMKKAMAKRQTGETKLNKASSRSHCIFTLTLHMRETTPEGEDLLKVGKLNLVDLAGSECIGRSGAKNQRAREAGNINKSLLTLGRVI-------SALVEKT-PHIPYRDSKLTRLLQESLGGRAKTCIIATVAPS 323
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: A0A7J9KVH0_GOSSC (Kinesin-like protein n=2 Tax=Malvaceae TaxID=3629 RepID=A0A7J9KVH0_GOSSC) HSP 1 Score: 236 bits (601), Expect = 1.500e-69 Identity = 134/292 (45.89%), Postives = 182/292 (62.33%), Query Frame = 1
Query: 67 AHKKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDISS-----P*NMDVIPRSV----------HADLQQGKPLIPADVEELQDILA--------GSSQKSKVVLREDARRGMVCCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATVTSS 873
A+K+ RTF +D VFGP + Q+E+F + V PIV E+L+G++ T+FA G TGTGK +TMEG P + VIPRSV +A+ + EE+ D+LA K + L ED + G+ GLEE V +A ++ IL+KG +R+TA TL++K SSRSHSIF++ I IKECTP+GEE+++ G+LNLVDLAG E + RSGA+ A+E G +N++LLTLGRVI HVPYRD+KLTRLL +SLGG+ K CIIAT++ S
Sbjct: 88 ANKQIDRTFLFDKVFGPSSQQKELFDLAVSPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRSVKQIFDILEAQNAEYSMKVTFLELYNEEITDLLAPEETMKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVTTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSG--------HVPYRDSKLTRLLRDSLGGKTKTCIIATISPS 371
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Match: D0MQ95_PHYIT (Kinesin-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQ95_PHYIT) HSP 1 Score: 246 bits (627), Expect = 2.830e-69 Identity = 143/300 (47.67%), Postives = 196/300 (65.33%), Query Frame = 1
Query: 1 RQRAAGNLHVVTTDPNHNRIRTAHKKTARTFQYDHVFGPFASQEEVFTVTVEPIVREMLQGFSTTVFADGHTGTGKAHTMEGDIS-SP*NMDVIPRSVHA--DLQQGK--------PLIPADVEELQDILAGSSQKSKVVLREDARRGMV-CCGLEEVQVMSAKNMFTILKKGIEQRQTAATLMSKNSSRSHSIFTVKIMIKECTPDGEEVMRNGQLNLVDLAGLECVGRSGAKTAHAKETGHVNQNLLTLGRVILHECRDDPPQGQKTLPHVPYRDTKLTRLLEESLGGRAKACIIATV 864
R++AAG V+ PN N + +KT + +D VFG +++Q++VFT V P V E L G++ TVFA G TGTGK +TM+GD+S + +IPRSVH D + + + EEL+D+L + K K+ L ED +RG + C L E+ +AK+++ ++ G++ R T+ TLM++NSSRSHSIFT++I KE GE+++R GQLNLVDLAG ECVGRSGA+ A A+E G +NQ+LLTLGRVI + LPHVPYRD+KLTRLL+ESLGGRAK IIAT+
Sbjct: 40 REKAAGRGAVLQCKPNSNELAVVKRKT---YTFDRVFGQYSTQKDVFTSVVRPAVDEALAGYNCTVFAYGQTGTGKTYTMQGDLSPGSESAGIIPRSVHCIFDALEARGEEFSVRVSFLQLYNEELKDLLDPDTDK-KLRLMEDVKRGGIYCMNLLEITATTAKHVYELVNTGVKNRITSETLMNENSSRSHSIFTIRIHSKEHNAAGEDLLRVGQLNLVDLAGSECVGRSGARNARAREAGTINQSLLTLGRVITALVDN--------LPHVPYRDSKLTRLLQESLGGRAKTTIIATL 327 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5218.12512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5218.12512.1 >prot_H-elongata_contig5218.12512.1 ID=prot_H-elongata_contig5218.12512.1|Name=mRNA_H-elongata_contig5218.12512.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp MDVIPRSVHADLQQGKPLIPADVEELQDILAGSSQKSKVVLREDARRGMVback to top mRNA from alignment at H-elongata_contig5218:6704..11704+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5218.12512.1 ID=mRNA_H-elongata_contig5218.12512.1|Name=mRNA_H-elongata_contig5218.12512.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5001bp|location=Sequence derived from alignment at H-elongata_contig5218:6704..11704+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5218:6704..11704+ >mRNA_H-elongata_contig5218.12512.1 ID=mRNA_H-elongata_contig5218.12512.1|Name=mRNA_H-elongata_contig5218.12512.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1248bp|location=Sequence derived from alignment at H-elongata_contig5218:6704..11704+ (Himanthalia elongata Himel1 dioecious)back to top |