prot_H-elongata_contig52155.12505.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52155.12505.1
Unique Nameprot_H-elongata_contig52155.12505.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
[Close]
BLAST of mRNA_H-elongata_contig52155.12505.1 vs. uniprot
Match: D8LCW3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW3_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 8.260e-21
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:    1 VSGSETSEDEARAGWVSLWGLGQGHYCGYLLKKSKRDPSLWRRRWCIL 48
            VSGS+TSEDE RAGW+ L GLGQGHYCGYL KKS+ DP+LWRRRWCIL
Sbjct:  468 VSGSDTSEDERRAGWIDLRGLGQGHYCGYLQKKSRSDPNLWRRRWCIL 515
[Close]
BLAST of mRNA_H-elongata_contig52155.12505.1 vs. uniprot
Match: A0A6H5KG66_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG66_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 8.260e-21
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:    1 VSGSETSEDEARAGWVSLWGLGQGHYCGYLLKKSKRDPSLWRRRWCIL 48
            VSGS+TSEDE RAGW+ L GLGQGHYCGYL KKS+ DP+LWRRRWCIL
Sbjct:  420 VSGSDTSEDERRAGWIDLRGLGQGHYCGYLQKKSRSDPNLWRRRWCIL 467
[Close]
BLAST of mRNA_H-elongata_contig52155.12505.1 vs. uniprot
Match: A0A4D9CU19_9STRA (PH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU19_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.570e-7
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:    1 VSGSETSEDEAR-----AGWVS-LWGLGQGHYCGYLLKKSKRDPSLWRRRWCIL 48
            +SG E S+DE       A W S   G+ +    GYLLK+S RDP LWRRRWC+L
Sbjct:  101 LSGPEASDDETSPSCPAASWFSDQAGISKPGLSGYLLKRSSRDPCLWRRRWCVL 154
[Close]
BLAST of mRNA_H-elongata_contig52155.12505.1 vs. uniprot
Match: A0A7R9U7P1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7P1_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.360e-6
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:    1 VSGSETSEDEARAGWVSLWGLG------QGHYCGYLLKKSKRDPSLWRRRWCIL 48
             SG ++S+DE    W  L  L        G   G+LLK+S RDP++WRRRWC+L
Sbjct:  143 ASGIDSSDDERGFAWRDLSHLTTSSSDRDGICSGFLLKRSSRDPNVWRRRWCVL 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52155.12505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCW3_ECTSI8.260e-2181.25PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KG66_9PHAE8.260e-2181.25PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A4D9CU19_9STRA5.570e-750.00PH domain-containing protein n=2 Tax=Monodopsidace... [more]
A0A7R9U7P1_9STRA9.360e-644.44Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 23..48
score: 7.309
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 6..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52155contigH-elongata_contig52155:105..248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52155.12505.1mRNA_H-elongata_contig52155.12505.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52155 105..248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52155.12505.1 ID=prot_H-elongata_contig52155.12505.1|Name=mRNA_H-elongata_contig52155.12505.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
VSGSETSEDEARAGWVSLWGLGQGHYCGYLLKKSKRDPSLWRRRWCIL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain