prot_H-elongata_contig52098.12498.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52098.12498.1
Unique Nameprot_H-elongata_contig52098.12498.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length387
Homology
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 2.640e-151
Identity = 260/387 (67.18%), Postives = 296/387 (76.49%), Query Frame = 0
Query:    1 QDAVEELATDPPTATERLRPLFRDLKELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            QDAVEEL TDPP+  ERLRP  RDLK+L+PAIASLHHRRIQP+RL SLLGTMRKV  VFHPP        G ++ E  G ++  +    RS VL +A+A V  NM  V+ RYLG+LN +AAA+DDY R ++DGE+LC  +  AAE E AA A LE         ELQ+VR+ LRKPSLQWKTLRTG +STVE+LVELRKSEA+KL PS WMQVSQTKDL RFHTPEVL LQQ+LL+AR+SRN+AARQAWAELV QVDE+CY GFR  VQALGTLDALLSLA VAKLPGYVRP YR    D +   +GG     G+D      E+D VD IVLRGARHPTVERVLEGGFVPNDV LR GECLVVTGPNMGGKSSTVRM AL+CI+GQ+
Sbjct:  902 QDAVEELVTDPPSVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPTAR-----GADETEGAGPSQ--QRGGPRSVVLLDALADVPANMAPVIARYLGELNAEAAASDDYVRALVDGESLCKELKTAAEEEEAAKADLET--------ELQSVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSGWMQVSQTKDLARFHTPEVLRLQQELLRARESRNLAARQAWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPNYRPTA-DAKGDESGGDG---GSD-----DEADGVDEIVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICILGQM 1264          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 1.030e-113
Identity = 210/388 (54.12%), Postives = 230/388 (59.28%), Query Frame = 0
Query:    1 QDAVEELATDPPTATERLRPLFRDLKELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPP-LRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            QDAVEEL  DPP+  ERLRP  RDLK+L+PA ASLHHRRIQPSRL SLLGTMRKV  +FHPP +RG     G    + GG          RSAVL +A+A V  NM  V+ RYLG+LN +AAA+                                             VR+ LRKPSLQWKTLRTG +STVE+LVELRKSEA+KL PS WMQ                                   AWAELV QVDE+CY GFR  VQALGTLDALLSLA VAKLPGYVRP YR    D+   S                 E+D VD IVLRGARHPTVERVLEGGFVPNDV LR GECLVVTGPNMGGKSSTVRM AL+CIMGQV
Sbjct:   49 QDAVEELVADPPSVMERLRPALRDLKDLDPATASLHHRRIQPSRLLSLLGTMRKVFGIFHPPTVRGADKTEGAGSSQQGGGP--------RSAVLLDALADVPANMAPVIARYLGELNAEAAAS--------------------------------------------CVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSDWMQ-----------------------------------AWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPKYRPTASDKGDESXXXXXXXD---------EADGVDEIVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICIMGQV 340          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A4D9D7G3_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7G3_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.680e-42
Identity = 131/389 (33.68%), Postives = 187/389 (48.07%), Query Frame = 0
Query:   22 FRDLKELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPP--LRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGV-SPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEG---------------GFVPNDVDL-----RSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            F DL  L   + +L + +I P RLF LL T+  +L    PP  L   V                      +S++LR  +  + + ++   +  +L  L+  +A TDD   +  D      +   A   + A    L+     +   EL   R  L  P+L ++TLRTG++S++E L+EL K EA   AP  W+ V+QTKDLVRFHTP+VL    +LL AR+        AWA  V +VDE C    +  V+ L TLD+LL+LA++A  PG+VRP Y     +   ++ G +                    I +R ARHP ++ V                  G VPNDVDL       G CLVVTGPNMGGKS+ +R VAL  ++GQ+
Sbjct:  358 FADLGTL---VTALRYHKIVPRRLFLLLQTLECLLLALPPPPVLEAEV----------------------KSSLLRRLLLSLPTSSLLQDVRAFLSLLHLPSAQTDDKVHLFTD-----PAFHPALSRDLALLQSLDA----ELNAELSVARRQLANPTLTFRTLRTGMNSSLECLIELPKKEAGH-APGDWLLVNQTKDLVRFHTPQVLRTLGRLLVAREETRQEGDAAWARYVKEVDERCGGKMQAVVEVLATLDSLLALASIASRPGWVRPTYVEAEDEDAGKNEGSLR-------------------ISIRDARHPVLDHVFTSSSAPTSLSSSPGPASGVVPNDVDLGVGLESPGSCLVVTGPNMGGKSTYIRTVALCQLLGQL 692          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A482RUS4_9ARCH (MutS family DNA mismatch repair protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUS4_9ARCH)

HSP 1 Score: 156 bits (395), Expect = 1.090e-38
Identity = 90/229 (39.30%), Postives = 127/229 (55.46%), Query Frame = 0
Query:  166 LQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEG---GFVPNDV----DLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            L+ +R+ +R PSLQ+ +LRTG +S VE L+EL  S + K  PS W++VS TK ++RFHTPE+L  QQ L   RD   +   + W + +  + E  +   R  V+ LG +DALLSL+ VAK P Y  PVY                              D  + ++++  RHP + R+LE     FVPNDV    D  +  C V+TGPNMGGKSS VRM+  +C++GQ+
Sbjct:  304 LEKIRTEVRIPSLQFVSLRTGATSVVEHLIELPASFS-KPVPSNWVKVSNTKSVMRFHTPEILRAQQDLYSVRDEIKLTTDRVWQKFIIDMRETLHNALRAAVRHLGNIDALLSLSEVAKYPNYCLPVY-----------------------------PDASNEVIIQDGRHPVLSRILEDQGEAFVPNDVKLSRDFLARSCQVLTGPNMGGKSSYVRMLGSICLLGQI 502          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: MSH3_NEOFI (DNA mismatch repair protein msh3 n=20 Tax=Aspergillus TaxID=5052 RepID=MSH3_NEOFI)

HSP 1 Score: 152 bits (384), Expect = 9.950e-37
Identity = 127/394 (32.23%), Postives = 196/394 (49.75%), Query Frame = 0
Query:    2 DAVEELAT-DPPTATERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQ-KLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE--CLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            +AVEEL + D     ERL+ L   +K +LE  +  +++ +     L ++L T++ +   +                    D K    +   S +L EAIA V P++   + ++L ++N  AA  DD   + R   + E + +     A  E+                EL+  RS      L+W  +    SS +E+L+E+  + A  K  P+ W++VS TK L RFHTPEV+ L ++  Q +++   A  QA+A L+ ++  + Y+ FR++VQ+L TLD LLSLAA+A  PGYV+P Y                             +D+    V +G RHP VE++L   +VPND+DL S     L+VTGPNMGGKSS VR +AL+ IM Q+
Sbjct:  585 NAVEELKSPDRTVQVERLKILLGRIKSDLEKNLIRIYYGKCTRPELLTVLQTLQTIAQEYV-------------------DVKTPEDSGFTSPILGEAIARV-PSILEDVVKFLNKINMHAARNDDKYEFFRESEETEGISEHKCGIASVEH----------------ELEEHRSVA-AGILKWPKVTYVTSSGIEYLIEVENTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIATN-YQSFRDSVQSLATLDCLLSLAAIASQPGYVKPEY-----------------------------TDQTCIHVEQG-RHPMVEQLLLDSYVPNDIDLDSDRTRALLVTGPNMGGKSSYVRQIALIAIMAQI 910          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: UPI001D03AED6 (Mismatch repair protein msh3 n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D03AED6)

HSP 1 Score: 151 bits (381), Expect = 2.480e-36
Identity = 122/392 (31.12%), Postives = 194/392 (49.49%), Query Frame = 0
Query:    3 AVEELA-TDPPTATERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGEC--LVVTGPNMGGKSSTVRMVALLCIMGQV 387
            A+E+L  +DPP   E+L+ +   ++ +LE ++  +++ +     L S+L T++++   F      +  G                    RS+V+ EAIA + P +   +  YL Q+NPQAA +DD   + R   + +++       A  E                 +L A RS   +   + K     V+  +E+L+E+   + + + P+ W ++S TK   RFHTPEV+ L ++  Q +++   A   A++EL+  +    Y+ FR+ +QALGTLD LLSLAAVA  PGYV+P +                DT   D               ++  RHP VE++L   +VPND+DL       L++TGPNMGGKSS VR VAL+ IMGQ+
Sbjct:  616 AIEDLKNSDPPMIAEKLKRMLSQIRTDLEKSLVRIYYGKCTRPELLSVLQTLQRIANEFAWAQEPSEVG-------------------FRSSVINEAIA-ILPTIAGDVVGYLDQINPQAATSDDRYSFFREESESDDITTHKLGIASVEQ----------------DLDAYRSVAAEKLKKMKVDYVVVAG-IEYLIEVDNHQLKNV-PASWAKISGTKKNSRFHTPEVIRLIRERDQHKEALAAACDTAFSELLASISSK-YQSFRDCIQALGTLDCLLSLAAVATQPGYVKPQF---------------TDTTCID---------------VKQGRHPMVEQLLLDAYVPNDIDLAFDRTRGLLLTGPNMGGKSSYVRQVALIAIMGQI 938          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A8H3FZD5_9LECA (DNA mismatch repair protein n=4 Tax=Parmeliaceae TaxID=78060 RepID=A0A8H3FZD5_9LECA)

HSP 1 Score: 150 bits (378), Expect = 6.150e-36
Identity = 122/392 (31.12%), Postives = 185/392 (47.19%), Query Frame = 0
Query:    3 AVEELATDPPTA-TERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE--CLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            AVEEL  D PT   ++++ L   ++ +LE ++  +++ +     L ++L TM+++   F                      K    A  RS+++  AIA + P +   +  YL Q+NP+AA  DD   + R  ++ E++ +     A  E                 EL A R        + K     V+  +E+L+E+  +   K  P+ W ++S TK + RFHTPEV+ L Q+  Q +++   A   A+A L+  +    Y+ FR+ VQAL TLD LLSLAA+A  PGYV+P Y                                   I +   RHP VE++L   +VPND  L S     L++TGPNMGGKSS VR VAL+ IMGQ+
Sbjct:  610 AVEELNDDQPTVRVDKVKHLLSQIRSDLEKSLIRIYYGKCARPELLTVLQTMQRIATEFV-------------------SVKSPSDAGFRSSIINNAIAAL-PTIAEDVVSYLDQINPEAAKVDDKYAFFREEVESEDIMEHKMGIASVEQ----------------ELDAHRPVAAGKVKKMKVDYVTVAG-IEYLIEIDNA-LLKNVPASWAKISGTKKVSRFHTPEVVRLIQERDQHKEALAAACDAAFAGLLADISSK-YQSFRDCVQALATLDCLLSLAAIASQPGYVKPEYTDET------------------------------CISVEQGRHPMVEQLLLDAYVPNDTGLASDRTRALLITGPNMGGKSSYVRQVALIAIMGQI 932          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: W6PY58_PENRF (DNA mismatch repair protein n=20 Tax=Penicillium TaxID=5073 RepID=W6PY58_PENRF)

HSP 1 Score: 149 bits (375), Expect = 1.510e-35
Identity = 123/395 (31.14%), Postives = 199/395 (50.38%), Query Frame = 0
Query:    2 DAVEELATDPPTAT--ERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRK-SEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSG--ECLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            +AVEEL  DP  A   ER+R L R +K +LE ++  +++ + +   L ++L  M+ +   F                    D K       +S+++ EAIA + P + + + +YL ++N  AA T+D   + R   + E + +   +    E+          +L++R E     ST+ +  +++ T+     S +E+L+E+   S A K  P+ W++VS TK + RFHTPEV+ L ++  Q +++   A  QA+  L+  +    Y+ FR+++Q+L TLD LLSLA +A+ PGYV+P Y    G                              + +   RHP VE++L   +VPND +L       L+VTGPNMGGKSS VR VAL+ IMGQ+
Sbjct:  579 NAVEELI-DPARAVPVERVRGLLRKVKSDLEKSLIRIYYGKCERPELLTVLQAMQMIAMEF-------------------ADIKSPAQTGFQSSLVGEAIASL-PTIRASVVKYLDKINMHAARTNDKYTFFREAEETEEIGELKLQIGSTEHG---------LLEHRKEAA---STIGRGKVEYSTV-----SGIEYLIEIENNSPALKRVPASWVKVSGTKRVSRFHTPEVIQLIRERDQYKEALAAACDQAYKTLLADIAAQ-YQSFRDSIQSLATLDCLLSLADIAQQPGYVKPEYTEEAG------------------------------LHIEQGRHPMVEQLLTDTYVPNDTNLSHDGTRALLVTGPNMGGKSSYVRQVALVAIMGQI 904          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A1L9S6Y7_9EURO (DNA mismatch repair protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9S6Y7_9EURO)

HSP 1 Score: 149 bits (375), Expect = 1.520e-35
Identity = 123/395 (31.14%), Postives = 193/395 (48.86%), Query Frame = 0
Query:    2 DAVEELATDPPTA-TERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRST----LRKPSLQWKTLRTGVSSTVEFLVELRK-SEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE--CLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            DAVEEL +   +A  ER++ L   ++ +LE ++  +++ +     L ++L T++ +   F                    D K    A   S VL EA+A + P +   +  +L ++N  AA  DD      + E        A        AG+E         EL+  RST    + K ++ + T+     + +E+L+E+   S + K  P+ W++VS TK L RFHTPEV+H+ ++  Q +++   A  QA++ L+ ++  + Y+  R+ +Q+L TLD LLSLAA+A  PGYV+P Y                                   I +   RHP VE++L   +VPND+ L S +   L+VTGPNMGGKSS VR VAL+ IMGQ+
Sbjct:  593 DAVEELKSPERSAQVERIKALLSKVRSDLEKSLIRIYYGKCTRPELLTVLQTLQMIAMEFC-------------------DVKSPADAGFASPVLGEALATL-PTILQTVVSFLDKINMHAAKKDDKYEFFRESEET-----DAISEYKLGIAGVEH--------ELREHRSTAAAVIGKKAVDYATV-----AGIEYLIEVENNSPSLKKVPASWVKVSGTKKLSRFHTPEVIHMLRQRDQHKEALAAACDQAFSALLAEISAN-YQSIRDCIQSLATLDCLLSLAAIASQPGYVKPEYTEET------------------------------CICVEKGRHPMVEQLLLDSYVPNDIKLESEQTRALLVTGPNMGGKSSYVRQVALIAIMGQI 918          
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: R7YTB6_CONA1 (DNA mismatch repair protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YTB6_CONA1)

HSP 1 Score: 149 bits (375), Expect = 1.530e-35
Identity = 109/302 (36.09%), Postives = 164/302 (54.30%), Query Frame = 0
Query:   90 RSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE-CLVVTGPNMGGKSSTVRMVALLCIMGQV 387
            +S++L+EAIA +    TSV+  YL ++NPQAA  DD   + R   + E + +     A  E++    L + R         A  + LRK  + + T+     S VE+L+E+  ++ + + P+ W ++S TK L RFHTPEV+ L ++  Q +++   A   A+A L+ ++    Y+  R+ +Q+L TLDALLSLA V+  PGY +PV+               AD P  D               ++  RHP VER+L   +VPNDVDL   +  L++TGPNMGGKSS VR VAL+ IM Q+
Sbjct:  722 KSSLLQEAIASLPEISTSVLD-YLERINPQAAKDDDKYAFFRDEYETEPITEHKLAIASIEDS----LNEHRA--------AAAAKLRKKKVDYVTV-----SAVEYLIEVENAQLKNV-PASWQKISGTKKLSRFHTPEVVKLLRERDQHKEALAAACDAAFAALLAEIGTK-YQALRDCIQSLATLDALLSLADVSAQPGYTKPVF---------------ADEPVID---------------VKAGRHPMVERLLLDAYVPNDVDLSPAQPALLITGPNMGGKSSYVRQVALIAIMAQI 973          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYL3_ECTSI2.640e-15167.18MutS protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K2F4_9PHAE1.030e-11354.12DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A4D9D7G3_9STRA3.680e-4233.68Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A482RUS4_9ARCH1.090e-3839.30MutS family DNA mismatch repair protein n=1 Tax=ar... [more]
MSH3_NEOFI9.950e-3732.23DNA mismatch repair protein msh3 n=20 Tax=Aspergil... [more]
UPI001D03AED62.480e-3631.12Mismatch repair protein msh3 n=1 Tax=Bacidia gigan... [more]
A0A8H3FZD5_9LECA6.150e-3631.12DNA mismatch repair protein n=4 Tax=Parmeliaceae T... [more]
W6PY58_PENRF1.510e-3531.14DNA mismatch repair protein n=20 Tax=Penicillium T... [more]
A0A1L9S6Y7_9EURO1.520e-3531.14DNA mismatch repair protein n=1 Tax=Penicilliopsis... [more]
R7YTB6_CONA11.530e-3536.09DNA mismatch repair protein n=1 Tax=Coniosporium a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007696DNA mismatch repair protein MutS, coreSMARTSM00533DNAendcoord: 1..343
e-value: 3.4E-5
score: 18.3
NoneNo IPR availableGENE3D1.10.1420.10coord: 114..256
e-value: 3.0E-35
score: 124.2
NoneNo IPR availableGENE3D1.10.1420.10coord: 1..283
e-value: 3.0E-35
score: 124.2
NoneNo IPR availableGENE3D3.40.50.300coord: 320..387
e-value: 2.4E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 328..387
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 1..296
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 328..387
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 1..296
IPR007861DNA mismatch repair protein MutS, clampPFAMPF05190MutS_IVcoord: 165..239
e-value: 1.7E-7
score: 31.5
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 1..286
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 329..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52098contigH-elongata_contig52098:51..2966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52098.12498.1mRNA_H-elongata_contig52098.12498.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52098 51..2966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52098.12498.1 ID=prot_H-elongata_contig52098.12498.1|Name=mRNA_H-elongata_contig52098.12498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp
QDAVEELATDPPTATERLRPLFRDLKELEPAIASLHHRRIQPSRLFSLLG
TMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAG
VSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAA
YAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKS
EAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWA
ELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGD
RRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVP
NDVDLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007696DNA_mismatch_repair_MutS_core
IPR007861DNA_mismatch_repair_MutS_clamp
IPR036187DNA_mismatch_repair_MutS_sf
IPR027417P-loop_NTPase