mRNA_H-elongata_contig52098.12498.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI) HSP 1 Score: 473 bits (1216), Expect = 2.640e-151 Identity = 260/387 (67.18%), Postives = 296/387 (76.49%), Query Frame = 1
Query: 1 QDAVEELATDPPTATERLRPLFRDLKELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
QDAVEEL TDPP+ ERLRP RDLK+L+PAIASLHHRRIQP+RL SLLGTMRKV VFHPP G ++ E G ++ + RS VL +A+A V NM V+ RYLG+LN +AAA+DDY R ++DGE+LC + AAE E AA A LE ELQ+VR+ LRKPSLQWKTLRTG +STVE+LVELRKSEA+KL PS WMQVSQTKDL RFHTPEVL LQQ+LL+AR+SRN+AARQAWAELV QVDE+CY GFR VQALGTLDALLSLA VAKLPGYVRP YR D + +GG G+D E+D VD IVLRGARHPTVERVLEGGFVPNDV LR GECLVVTGPNMGGKSSTVRM AL+CI+GQ+
Sbjct: 902 QDAVEELVTDPPSVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPTAR-----GADETEGAGPSQ--QRGGPRSVVLLDALADVPANMAPVIARYLGELNAEAAASDDYVRALVDGESLCKELKTAAEEEEAAKADLET--------ELQSVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSGWMQVSQTKDLARFHTPEVLRLQQELLRARESRNLAARQAWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPNYRPTA-DAKGDESGGDG---GSD-----DEADGVDEIVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICILGQM 1264
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE) HSP 1 Score: 350 bits (898), Expect = 1.030e-113 Identity = 210/388 (54.12%), Postives = 230/388 (59.28%), Query Frame = 1
Query: 1 QDAVEELATDPPTATERLRPLFRDLKELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPP-LRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
QDAVEEL DPP+ ERLRP RDLK+L+PA ASLHHRRIQPSRL SLLGTMRKV +FHPP +RG G + GG RSAVL +A+A V NM V+ RYLG+LN +AAA+ VR+ LRKPSLQWKTLRTG +STVE+LVELRKSEA+KL PS WMQ AWAELV QVDE+CY GFR VQALGTLDALLSLA VAKLPGYVRP YR D+ S E+D VD IVLRGARHPTVERVLEGGFVPNDV LR GECLVVTGPNMGGKSSTVRM AL+CIMGQV
Sbjct: 49 QDAVEELVADPPSVMERLRPALRDLKDLDPATASLHHRRIQPSRLLSLLGTMRKVFGIFHPPTVRGADKTEGAGSSQQGGGP--------RSAVLLDALADVPANMAPVIARYLGELNAEAAAS--------------------------------------------CVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSDWMQ-----------------------------------AWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPKYRPTASDKGDESXXXXXXXD---------EADGVDEIVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICIMGQV 340
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A4D9D7G3_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7G3_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.680e-42 Identity = 131/389 (33.68%), Postives = 187/389 (48.07%), Query Frame = 1
Query: 64 FRDLKELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPP--LRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGV-SPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEG---------------GFVPNDVDL-----RSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
F DL L + +L + +I P RLF LL T+ +L PP L V +S++LR + + + ++ + +L L+ +A TDD + D + A + A L+ + EL R L P+L ++TLRTG++S++E L+EL K EA AP W+ V+QTKDLVRFHTP+VL +LL AR+ AWA V +VDE C + V+ L TLD+LL+LA++A PG+VRP Y + ++ G + I +R ARHP ++ V G VPNDVDL G CLVVTGPNMGGKS+ +R VAL ++GQ+
Sbjct: 358 FADLGTL---VTALRYHKIVPRRLFLLLQTLECLLLALPPPPVLEAEV----------------------KSSLLRRLLLSLPTSSLLQDVRAFLSLLHLPSAQTDDKVHLFTD-----PAFHPALSRDLALLQSLDA----ELNAELSVARRQLANPTLTFRTLRTGMNSSLECLIELPKKEAGH-APGDWLLVNQTKDLVRFHTPQVLRTLGRLLVAREETRQEGDAAWARYVKEVDERCGGKMQAVVEVLATLDSLLALASIASRPGWVRPTYVEAEDEDAGKNEGSLR-------------------ISIRDARHPVLDHVFTSSSAPTSLSSSPGPASGVVPNDVDLGVGLESPGSCLVVTGPNMGGKSTYIRTVALCQLLGQL 692
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A482RUS4_9ARCH (MutS family DNA mismatch repair protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUS4_9ARCH) HSP 1 Score: 156 bits (395), Expect = 1.090e-38 Identity = 90/229 (39.30%), Postives = 127/229 (55.46%), Query Frame = 1
Query: 496 LQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEG---GFVPNDV----DLRSGECLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
L+ +R+ +R PSLQ+ +LRTG +S VE L+EL S + K PS W++VS TK ++RFHTPE+L QQ L RD + + W + + + E + R V+ LG +DALLSL+ VAK P Y PVY D + ++++ RHP + R+LE FVPNDV D + C V+TGPNMGGKSS VRM+ +C++GQ+
Sbjct: 304 LEKIRTEVRIPSLQFVSLRTGATSVVEHLIELPASFS-KPVPSNWVKVSNTKSVMRFHTPEILRAQQDLYSVRDEIKLTTDRVWQKFIIDMRETLHNALRAAVRHLGNIDALLSLSEVAKYPNYCLPVY-----------------------------PDASNEVIIQDGRHPVLSRILEDQGEAFVPNDVKLSRDFLARSCQVLTGPNMGGKSSYVRMLGSICLLGQI 502
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: MSH3_NEOFI (DNA mismatch repair protein msh3 n=20 Tax=Aspergillus TaxID=5052 RepID=MSH3_NEOFI) HSP 1 Score: 152 bits (384), Expect = 9.950e-37 Identity = 127/394 (32.23%), Postives = 196/394 (49.75%), Query Frame = 1
Query: 4 DAVEELAT-DPPTATERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQ-KLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE--CLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
+AVEEL + D ERL+ L +K +LE + +++ + L ++L T++ + + D K + S +L EAIA V P++ + ++L ++N AA DD + R + E + + A E+ EL+ RS L+W + SS +E+L+E+ + A K P+ W++VS TK L RFHTPEV+ L ++ Q +++ A QA+A L+ ++ + Y+ FR++VQ+L TLD LLSLAA+A PGYV+P Y +D+ V +G RHP VE++L +VPND+DL S L+VTGPNMGGKSS VR +AL+ IM Q+
Sbjct: 585 NAVEELKSPDRTVQVERLKILLGRIKSDLEKNLIRIYYGKCTRPELLTVLQTLQTIAQEYV-------------------DVKTPEDSGFTSPILGEAIARV-PSILEDVVKFLNKINMHAARNDDKYEFFRESEETEGISEHKCGIASVEH----------------ELEEHRSVA-AGILKWPKVTYVTSSGIEYLIEVENTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIATN-YQSFRDSVQSLATLDCLLSLAAIASQPGYVKPEY-----------------------------TDQTCIHVEQG-RHPMVEQLLLDSYVPNDIDLDSDRTRALLVTGPNMGGKSSYVRQIALIAIMAQI 910
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: UPI001D03AED6 (Mismatch repair protein msh3 n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D03AED6) HSP 1 Score: 151 bits (381), Expect = 2.480e-36 Identity = 122/392 (31.12%), Postives = 194/392 (49.49%), Query Frame = 1
Query: 7 AVEELA-TDPPTATERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGEC--LVVTGPNMGGKSSTVRMVALLCIMGQV 1161
A+E+L +DPP E+L+ + ++ +LE ++ +++ + L S+L T++++ F + G RS+V+ EAIA + P + + YL Q+NPQAA +DD + R + +++ A E +L A RS + + K V+ +E+L+E+ + + + P+ W ++S TK RFHTPEV+ L ++ Q +++ A A++EL+ + Y+ FR+ +QALGTLD LLSLAAVA PGYV+P + DT D ++ RHP VE++L +VPND+DL L++TGPNMGGKSS VR VAL+ IMGQ+
Sbjct: 616 AIEDLKNSDPPMIAEKLKRMLSQIRTDLEKSLVRIYYGKCTRPELLSVLQTLQRIANEFAWAQEPSEVG-------------------FRSSVINEAIA-ILPTIAGDVVGYLDQINPQAATSDDRYSFFREESESDDITTHKLGIASVEQ----------------DLDAYRSVAAEKLKKMKVDYVVVAG-IEYLIEVDNHQLKNV-PASWAKISGTKKNSRFHTPEVIRLIRERDQHKEALAAACDTAFSELLASISSK-YQSFRDCIQALGTLDCLLSLAAVATQPGYVKPQF---------------TDTTCID---------------VKQGRHPMVEQLLLDAYVPNDIDLAFDRTRGLLLTGPNMGGKSSYVRQVALIAIMGQI 938
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A8H3FZD5_9LECA (DNA mismatch repair protein n=4 Tax=Parmeliaceae TaxID=78060 RepID=A0A8H3FZD5_9LECA) HSP 1 Score: 150 bits (378), Expect = 6.150e-36 Identity = 122/392 (31.12%), Postives = 185/392 (47.19%), Query Frame = 1
Query: 7 AVEELATDPPTA-TERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE--CLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
AVEEL D PT ++++ L ++ +LE ++ +++ + L ++L TM+++ F K A RS+++ AIA + P + + YL Q+NP+AA DD + R ++ E++ + A E EL A R + K V+ +E+L+E+ + K P+ W ++S TK + RFHTPEV+ L Q+ Q +++ A A+A L+ + Y+ FR+ VQAL TLD LLSLAA+A PGYV+P Y I + RHP VE++L +VPND L S L++TGPNMGGKSS VR VAL+ IMGQ+
Sbjct: 610 AVEELNDDQPTVRVDKVKHLLSQIRSDLEKSLIRIYYGKCARPELLTVLQTMQRIATEFV-------------------SVKSPSDAGFRSSIINNAIAAL-PTIAEDVVSYLDQINPEAAKVDDKYAFFREEVESEDIMEHKMGIASVEQ----------------ELDAHRPVAAGKVKKMKVDYVTVAG-IEYLIEIDNA-LLKNVPASWAKISGTKKVSRFHTPEVVRLIQERDQHKEALAAACDAAFAGLLADISSK-YQSFRDCVQALATLDCLLSLAAIASQPGYVKPEYTDET------------------------------CISVEQGRHPMVEQLLLDAYVPNDTGLASDRTRALLITGPNMGGKSSYVRQVALIAIMGQI 932
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: W6PY58_PENRF (DNA mismatch repair protein n=20 Tax=Penicillium TaxID=5073 RepID=W6PY58_PENRF) HSP 1 Score: 149 bits (375), Expect = 1.510e-35 Identity = 123/395 (31.14%), Postives = 199/395 (50.38%), Query Frame = 1
Query: 4 DAVEELATDPPTAT--ERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRK-SEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSG--ECLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
+AVEEL DP A ER+R L R +K +LE ++ +++ + + L ++L M+ + F D K +S+++ EAIA + P + + + +YL ++N AA T+D + R + E + + + E+ +L++R E ST+ + +++ T+ S +E+L+E+ S A K P+ W++VS TK + RFHTPEV+ L ++ Q +++ A QA+ L+ + Y+ FR+++Q+L TLD LLSLA +A+ PGYV+P Y G + + RHP VE++L +VPND +L L+VTGPNMGGKSS VR VAL+ IMGQ+
Sbjct: 579 NAVEELI-DPARAVPVERVRGLLRKVKSDLEKSLIRIYYGKCERPELLTVLQAMQMIAMEF-------------------ADIKSPAQTGFQSSLVGEAIASL-PTIRASVVKYLDKINMHAARTNDKYTFFREAEETEEIGELKLQIGSTEHG---------LLEHRKEAA---STIGRGKVEYSTV-----SGIEYLIEIENNSPALKRVPASWVKVSGTKRVSRFHTPEVIQLIRERDQYKEALAAACDQAYKTLLADIAAQ-YQSFRDSIQSLATLDCLLSLADIAQQPGYVKPEYTEEAG------------------------------LHIEQGRHPMVEQLLTDTYVPNDTNLSHDGTRALLVTGPNMGGKSSYVRQVALVAIMGQI 904
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: A0A1L9S6Y7_9EURO (DNA mismatch repair protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9S6Y7_9EURO) HSP 1 Score: 149 bits (375), Expect = 1.520e-35 Identity = 123/395 (31.14%), Postives = 193/395 (48.86%), Query Frame = 1
Query: 4 DAVEELATDPPTA-TERLRPLFRDLK-ELEPAIASLHHRRIQPSRLFSLLGTMRKVLAVFHPPLRGTVGGGGTNDGENGGDTKVDRAATARSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDDYARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRST----LRKPSLQWKTLRTGVSSTVEFLVELRK-SEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE--CLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
DAVEEL + +A ER++ L ++ +LE ++ +++ + L ++L T++ + F D K A S VL EA+A + P + + +L ++N AA DD + E A AG+E EL+ RST + K ++ + T+ + +E+L+E+ S + K P+ W++VS TK L RFHTPEV+H+ ++ Q +++ A QA++ L+ ++ + Y+ R+ +Q+L TLD LLSLAA+A PGYV+P Y I + RHP VE++L +VPND+ L S + L+VTGPNMGGKSS VR VAL+ IMGQ+
Sbjct: 593 DAVEELKSPERSAQVERIKALLSKVRSDLEKSLIRIYYGKCTRPELLTVLQTLQMIAMEFC-------------------DVKSPADAGFASPVLGEALATL-PTILQTVVSFLDKINMHAAKKDDKYEFFRESEET-----DAISEYKLGIAGVEH--------ELREHRSTAAAVIGKKAVDYATV-----AGIEYLIEVENNSPSLKKVPASWVKVSGTKKLSRFHTPEVIHMLRQRDQHKEALAAACDQAFSALLAEISAN-YQSIRDCIQSLATLDCLLSLAAIASQPGYVKPEYTEET------------------------------CICVEKGRHPMVEQLLLDSYVPNDIKLESEQTRALLVTGPNMGGKSSYVRQVALIAIMGQI 918
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Match: R7YTB6_CONA1 (DNA mismatch repair protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YTB6_CONA1) HSP 1 Score: 149 bits (375), Expect = 1.530e-35 Identity = 109/302 (36.09%), Postives = 164/302 (54.30%), Query Frame = 1
Query: 268 RSAVLREAIAGVSPNMTSVMGRYLGQLNPQAAATDD---YARVIIDGENLCDSVARAAEAENAAYAGLEKARILKYRFELQAVRSTLRKPSLQWKTLRTGVSSTVEFLVELRKSEAQKLAPSKWMQVSQTKDLVRFHTPEVLHLQQKLLQARDSRNIAARQAWAELVCQVDEDCYEGFRNTVQALGTLDALLSLAAVAKLPGYVRPVYRHNLGDRRKRSNGGIADTPGADRYHMRAESDRVDAIVLRGARHPTVERVLEGGFVPNDVDLRSGE-CLVVTGPNMGGKSSTVRMVALLCIMGQV 1161
+S++L+EAIA + TSV+ YL ++NPQAA DD + R + E + + A E++ L + R A + LRK + + T+ S VE+L+E+ ++ + + P+ W ++S TK L RFHTPEV+ L ++ Q +++ A A+A L+ ++ Y+ R+ +Q+L TLDALLSLA V+ PGY +PV+ AD P D ++ RHP VER+L +VPNDVDL + L++TGPNMGGKSS VR VAL+ IM Q+
Sbjct: 722 KSSLLQEAIASLPEISTSVLD-YLERINPQAAKDDDKYAFFRDEYETEPITEHKLAIASIEDS----LNEHRA--------AAAAKLRKKKVDYVTV-----SAVEYLIEVENAQLKNV-PASWQKISGTKKLSRFHTPEVVKLLRERDQHKEALAAACDAAFAALLAEIGTK-YQALRDCIQSLATLDALLSLADVSAQPGYTKPVF---------------ADEPVID---------------VKAGRHPMVERLLLDAYVPNDVDLSPAQPALLITGPNMGGKSSYVRQVALIAIMAQI 973 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52098.12498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52098.12498.1 >prot_H-elongata_contig52098.12498.1 ID=prot_H-elongata_contig52098.12498.1|Name=mRNA_H-elongata_contig52098.12498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp QDAVEELATDPPTATERLRPLFRDLKELEPAIASLHHRRIQPSRLFSLLGback to top mRNA from alignment at H-elongata_contig52098:51..2966- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52098.12498.1 ID=mRNA_H-elongata_contig52098.12498.1|Name=mRNA_H-elongata_contig52098.12498.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2916bp|location=Sequence derived from alignment at H-elongata_contig52098:51..2966- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52098:51..2966- >mRNA_H-elongata_contig52098.12498.1 ID=mRNA_H-elongata_contig52098.12498.1|Name=mRNA_H-elongata_contig52098.12498.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2322bp|location=Sequence derived from alignment at H-elongata_contig52098:51..2966- (Himanthalia elongata Himel1 dioecious)back to top |