prot_H-elongata_contig52089.12496.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52089.12496.1
Unique Nameprot_H-elongata_contig52089.12496.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.280e-64
Identity = 98/119 (82.35%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQPINMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMGH 119
            MG VFG+FLG +GDMQP+ M+NGREVPQ P +EQARLAY QTA+RSLSM RNFASFSAIFMGSECVIEKMRGK+DMMNSVYAGC TGAAFGMKQGPQAAC GC GMA FSA++DK+MGH
Sbjct:   74 MGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 179 bits (453), Expect = 6.060e-55
Identity = 90/119 (75.63%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQPINMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMGH 119
            MGL+FGMFLG +GDMQPI ++NGREVPQ PL EQAR AY  T  RSL MA+NFASFSAIFM SECVIEKMRGK DMMNSVY GC+TG AFG+K GP+ A  GC GMAAFSAVID +MGH
Sbjct:   81 MGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.260e-39
Identity = 70/120 (58.33%), Postives = 87/120 (72.50%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMGH 119
            MGL+ G+FLG + DM P + ++NG+EVPQ PLKEQAR     T E+ +  +RNFA  + +F GSEC++EK RGK D+ N V +GCVTGAA   KQGPQAA LGC G AAFS VID +MGH
Sbjct:  101 MGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.300e-38
Identity = 69/120 (57.50%), Postives = 84/120 (70.00%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMGH 119
            MGLV G+FLG +GD+ P I  V G+E PQPPL EQAR AY  TAERS+  AR+F + +A+F G+ECVIEK RG+ D  N V +GC  GA      GP AAC+GCAG AAFSA  + +MGH
Sbjct:   72 MGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.260e-37
Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 0
Query:    2 GLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMG 118
            GLV G+FLG + DM P + ++NG+EVPQ PL+EQ R     T E+SL  ARNFA  + +F G++C++EK RG  D+ NSV +GCVTGAA   KQGPQAA +GC G AAFS VIDK+MG
Sbjct:  118 GLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: W7TL11_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL11_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.660e-36
Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMG 118
            +G++ G+FLG +GDM P I ++NGRE PQ P  EQ RLAY  T ER    ARNF + +A+F G +CV+EK RGK D  N+V +GC  GAA   KQGPQAACLGCAG AAFS +++ +MG
Sbjct:   87 LGVMMGIFLGAMGDMSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGVDCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIMEVVMG 205          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.290e-36
Identity = 68/120 (56.67%), Postives = 84/120 (70.00%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMGH 119
            MGL+ G+FLG + D QP I +  G++VPQ P KEQAR     TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC+TGAA     GPQAA +GC G AAFS VIDKIMG+
Sbjct:  151 MGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A1E7EXB6_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXB6_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.890e-35
Identity = 66/118 (55.93%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIM 117
            MGL+ G+FLG + D  P I  V GR+VPQ P KEQ R     TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC+TGAA   K GPQAA +GC G AAFS VID  M
Sbjct:   17 MGLLMGVFLGALSDSSPPIQAVGGRDVPQAPFKEQVRFTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAKAGPQAAAVGCGGFAAFSIVIDSFM 134          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 129 bits (323), Expect = 1.050e-34
Identity = 66/119 (55.46%), Postives = 82/119 (68.91%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMG 118
            MGLV G+FLG + DM P + ++ G+EVPQ PLKEQ R     TA++SL   R FA  + +F GSEC++EK RGK D+ NSV +GC+TGAA   KQGPQA+  GC G A FS VID  MG
Sbjct:  125 MGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243          
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.210e-34
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MGLVFGMFLGLIGDMQP-INMVNGREVPQPPLKEQARLAYTQTAERSLSMARNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAACLGCAGMAAFSAVIDKIMG 118
            MGL+ G+FLG + DM P + ++ G+EVPQ PLKEQ R     TAE+S+   R FA  + +F GSEC++EK RGK+D+ NSV +GCVTGAA   K GP +A  GC G AAFS VID +MG
Sbjct:  145 MGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52089.12496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE1.280e-6482.35Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA6.060e-5575.63Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA2.260e-3958.33Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA2.300e-3857.50Mitochondrial import inner membrane translocase su... [more]
A0A7S3VGZ9_9STRA3.260e-3757.63Mitochondrial import inner membrane translocase su... [more]
W7TL11_9STRA1.660e-3656.30Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA6.290e-3656.67Mitochondrial import inner membrane translocase su... [more]
A0A1E7EXB6_9STRA1.890e-3555.93Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC1.050e-3455.46Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA1.210e-3454.62Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 1..110
e-value: 1.0E-26
score: 93.5
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 1..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 1..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52089contigH-elongata_contig52089:101..1159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52089.12496.1mRNA_H-elongata_contig52089.12496.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52089 92..1159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52089.12496.1 ID=prot_H-elongata_contig52089.12496.1|Name=mRNA_H-elongata_contig52089.12496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MGLVFGMFLGLIGDMQPINMVNGREVPQPPLKEQARLAYTQTAERSLSMA
RNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCVTGAAFGMKQGPQAAC
LGCAGMAAFSAVIDKIMGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22