mRNA_H-elongata_contig115794.1249.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: D8LFV5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV5_ECTSI) HSP 1 Score: 122 bits (306), Expect = 4.810e-34 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 1 AGYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVTSE 297
+GY++G+L SS+M G + +YFW VADR GRR V+L+ L+ST L++AFGFS TF AL CRF LG +G+ ++ LVSEICGKEHE+VG+GAVTSE
Sbjct: 3 SGYFAGLLSSSFMFGRVISAYFWGIVADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPTLVSEICGKEHEVVGLGAVTSE 101
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 122 bits (306), Expect = 8.010e-31 Identity = 57/99 (57.58%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 1 AGYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVTSE 297
+GY++G+L SS+M+G + +YFW +ADR GRR V+L+ L+ST L++AFGFS TF AL CRF LG +G+ ++ LVSEICGKEHE+VG+GAVTSE
Sbjct: 3 SGYFAGLLSSSFMVGRVISAYFWGIIADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPSLVSEICGKEHEVVGLGAVTSE 101
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.910e-26 Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 AGYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVT 291
AGYY+G L S++M+G ADRYGR V+ IGLSS LS+AFG S FW AL CRF LGA +G++ ++K ++SEICGK+HE VGMG VT
Sbjct: 79 AGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVT 175
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 110 bits (275), Expect = 4.310e-26 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 AGYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVT 291
AGYY+G L S++M+G ADRYGR V+ IGLSS LS+AFG S FW AL CRF LGA +G++ ++K ++SEICGK+HE VGMG +T
Sbjct: 47 AGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHETVGMGYIT 143
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.800e-25 Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 AGYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVT 291
AGYY+G L S++M+G S ADRYGR V+ IGLSS LS+AFG S FW AL CRF LGA + ++ ++K ++SEICGK+HE VGMG VT
Sbjct: 115 AGYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMGYVT 211
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A835Z5M2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.570e-22 Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 4 GYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVT 291
GYY+G + ++M+G SY W R +D+YGR+ +LIG +S S+ FG S W+A+L R LGA +G V KV VSEICGK HE+ GMG +T
Sbjct: 4 GYYAGFIAGAFMLGRFASSYPWGRFSDKYGRKPALLIGAASVCVFSLGFGLSTELWVAVLMRLLLGALNGTVSTCKVCVSEICGKAHEVKGMGYIT 99
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A0K9QBB5_SPIOL (MFS domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QBB5_SPIOL) HSP 1 Score: 97.4 bits (241), Expect = 1.340e-21 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 4 GYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVTS 294
GYY+G + S++M G S FW ++ADRYGR+ +I+IG ++ V + FG S FWMA+ RF LG+ GI+ AK VSE+C +EH+ VGM +T+
Sbjct: 76 GYYAGFIGSAFMFGRALTSVFWGKLADRYGRKPIIIIGTTAVVIFNTMFGLSVNFWMAVSSRFLLGSLCGILGPAKAYVSEVCREEHQAVGMSVITT 172
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A7C9AF44_OPUST (MFS domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AF44_OPUST) HSP 1 Score: 95.5 bits (236), Expect = 3.950e-21 Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 4 GYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVTS 294
GYY+G + S++M+G S FW +ADRYGR+ V++ G ++ V + FG S FWMA+ RF LG+ +G++ AK +SE+C +EH+ VGM +T+
Sbjct: 76 GYYAGFVGSAFMLGRALTSVFWGTIADRYGRKPVMIFGAAAVVIFNTLFGLSVNFWMAVSTRFLLGSLNGLLGPAKAYISEVCREEHQAVGMSVITT 172
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A7N0VNJ7_KALFE (MFS domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VNJ7_KALFE) HSP 1 Score: 95.1 bits (235), Expect = 9.350e-21 Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 4 GYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVTS 294
G+Y+G + SSYM+G S W VADRYGR+ V+L G S V + FGFS FWMA++ RF LG+ G++ AK V E+C KEH+ +GM +++
Sbjct: 83 GFYAGFVGSSYMVGRALTSIPWGVVADRYGRKPVLLCGTISVVVFNTLFGFSNKFWMAVVTRFFLGSLSGVLGPAKAYVMEVCRKEHQALGMSVIST 179
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Match: A0A1D1ZE51_9ARAE (Putative peptide/nitrate transporter At3g43790 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZE51_9ARAE) HSP 1 Score: 94.0 bits (232), Expect = 1.470e-20 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 4 GYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFGFSQTFWMALLCRFSLGACDGIVIVAKVLVSEICGKEHEIVGMGAVTS 294
GYY+G + SS+M G S FW VADRYGR+ VI+ G S + + FG S +FWMA+L RF LG + + K SEIC +EH+ +GM +T+
Sbjct: 77 GYYAGYVGSSFMFGRALTSLFWGVVADRYGRKPVIVFGTISVIIFNTLFGLSSSFWMAILTRFLLGCLNAVFAPIKAYASEICRQEHQSIGMSVITT 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115794.1249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115794.1249.1 >prot_H-elongata_contig115794.1249.1 ID=prot_H-elongata_contig115794.1249.1|Name=mRNA_H-elongata_contig115794.1249.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp AGYYSGILISSYMIGTIFMSYFWVRVADRYGRRKVILIGLSSTVTLSIAFback to top mRNA from alignment at H-elongata_contig115794:820..1297- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115794.1249.1 ID=mRNA_H-elongata_contig115794.1249.1|Name=mRNA_H-elongata_contig115794.1249.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=478bp|location=Sequence derived from alignment at H-elongata_contig115794:820..1297- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115794:820..1297- >mRNA_H-elongata_contig115794.1249.1 ID=mRNA_H-elongata_contig115794.1249.1|Name=mRNA_H-elongata_contig115794.1249.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=600bp|location=Sequence derived from alignment at H-elongata_contig115794:820..1297- (Himanthalia elongata Himel1 dioecious)back to top |