mRNA_H-elongata_contig115768.1248.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A7S3GWQ3_9STRA (Diphthine--ammonia ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWQ3_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.190e-24 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
MKFVAL+SGGKDSCFN ++CV HGHEL+CL NL P A+ GE E DSFMYQ+AGHTAI +ECF PL+R+
Sbjct: 1 MKFVALLSGGKDSCFNVIKCVEHGHELICLANLSPP--ASFDGE----EMDSFMYQTAGHTAISKLSECFEVPLIRK 71
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A875RUR1_EENNA (Diphthine--ammonia ligase n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875RUR1_EENNA) HSP 1 Score: 95.5 bits (236), Expect = 3.290e-21 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPL 222
MKFVAL+SGGKDSCFN + C+ +GHEL+CL NLYP + SDE DSFMYQ+ G+ A++ AEC GKPL
Sbjct: 1 MKFVALVSGGKDSCFNILHCLANGHELICLANLYPPPSG-------SDEIDSFMYQTVGYDALKYYAECIGKPL 67
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A2P2KEG6_RHIMU (Diphthine--ammonia ligase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KEG6_RHIMU) HSP 1 Score: 87.0 bits (214), Expect = 7.460e-21 Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
MK VAL+SGGKDSC+ M+CVR+GHE+V L NL PA + DE DS+MYQ+ GH I AEC G PL RR
Sbjct: 1 MKVVALVSGGKDSCYAMMKCVRYGHEIVALANLMPA-------DDLVDELDSYMYQTVGHQIIVGYAECMGLPLFRR 70
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A099P2T0_PICKU (Diphthine--ammonia ligase n=4 Tax=Pichia kudriavzevii TaxID=4909 RepID=A0A099P2T0_PICKU) HSP 1 Score: 93.2 bits (230), Expect = 2.150e-20 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVR 228
MKFVAL+SGGKDSCFN + C+ GHELVCL NLYPA E +DE DS+MYQ+ GH + +C GKP+ R
Sbjct: 1 MKFVALVSGGKDSCFNILHCLAQGHELVCLANLYPA-------EPDNDEIDSYMYQTVGHDVLTLYEKCTGKPMYR 69
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A1E4T9X7_9ASCO (Diphthine--ammonia ligase (Fragment) n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4T9X7_9ASCO) HSP 1 Score: 92.4 bits (228), Expect = 2.560e-20 Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
MKFVALISGGKDSC+N MECVR GHELV + NL+P DE +S+MYQ+ GH AI AECF PL RR
Sbjct: 3 MKFVALISGGKDSCYNVMECVRLGHELVAIANLHPPVG---------DELNSYMYQTVGHDAIPYLAECFDVPLYRR 70
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: UPI001F049302 (diphthine--ammonia ligase-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F049302) HSP 1 Score: 89.7 bits (221), Expect = 3.590e-20 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
M+ VALISGGKDSCFN ++CV+HGHE+V L NL P + DE DS+MYQ+ GH AIE +E G PL RR
Sbjct: 1 MRVVALISGGKDSCFNMLQCVKHGHEIVALANLRPPPS--------KDELDSYMYQTVGHNAIELYSEAMGVPLFRR 69
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A0N4UMS2_DRAME (Diphthine--ammonia ligase n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UMS2_DRAME) HSP 1 Score: 89.4 bits (220), Expect = 4.440e-20 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
MK VALISGGKDSCFN M+CV +GH++VCL NLYP+ DE DS+MYQ+ GH A+E E PL+RR
Sbjct: 1 MKVVALISGGKDSCFNMMKCVDNGHKVVCLANLYPSEG---------DELDSYMYQTVGHNAVELYGEACDLPLLRR 68
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A4T0WVC9_9ASCO (Diphthine--ammonia ligase n=1 Tax=[Candida] inconspicua TaxID=52247 RepID=A0A4T0WVC9_9ASCO) HSP 1 Score: 92.0 bits (227), Expect = 5.500e-20 Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVR 228
MKFVAL+SGGKDSCFN + C+ GHEL+CL NLYP + E +DE DS+MYQ+ GH + C GKP+ R
Sbjct: 1 MKFVALVSGGKDSCFNILHCLVEGHELICLANLYPES------EEGNDEIDSYMYQTVGHDVLTLYERCIGKPMYR 70
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A4X2KMR4_VOMUR (Diphthine--ammonia ligase n=6 Tax=Metatheria TaxID=9263 RepID=A0A4X2KMR4_VOMUR) HSP 1 Score: 87.0 bits (214), Expect = 6.790e-20 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
M+ ALISGGKDSC+N M+CV GH++V L NL PA +V SDE DS+MYQ+ GH AIE AE G PL R+
Sbjct: 1 MRVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAK-----NQVGSDELDSYMYQTVGHQAIELFAEAMGLPLYRQ 72
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Match: A0A1E4T8X0_9ASCO (Diphthine--ammonia ligase (Fragment) n=1 Tax=[Candida] arabinofermentans NRRL YB-2248 TaxID=983967 RepID=A0A1E4T8X0_9ASCO) HSP 1 Score: 91.7 bits (226), Expect = 7.110e-20 Identity = 42/77 (54.55%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETDSFMYQSAGHTAIEAQAECFGKPLVRR 231
MKFVAL+SGGKDSCFN + C +GHEL+CL NLYP + SDE DSFMYQ+ GH + +C GKP+ R+
Sbjct: 1 MKFVALVSGGKDSCFNILHCQANGHELICLANLYPPPSD-------SDELDSFMYQTVGHDILAYYEQCIGKPMYRQ 70 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115768.1248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115768.1248.1 >prot_H-elongata_contig115768.1248.1 ID=prot_H-elongata_contig115768.1248.1|Name=mRNA_H-elongata_contig115768.1248.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp MKFVALISGGKDSCFNTMECVRHGHELVCLGNLYPATAAASAGEVASDETback to top mRNA from alignment at H-elongata_contig115768:540..1193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115768.1248.1 ID=mRNA_H-elongata_contig115768.1248.1|Name=mRNA_H-elongata_contig115768.1248.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=654bp|location=Sequence derived from alignment at H-elongata_contig115768:540..1193- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115768:540..1193- >mRNA_H-elongata_contig115768.1248.1 ID=mRNA_H-elongata_contig115768.1248.1|Name=mRNA_H-elongata_contig115768.1248.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=468bp|location=Sequence derived from alignment at H-elongata_contig115768:540..1193- (Himanthalia elongata Himel1 dioecious)back to top |