prot_H-elongata_contig51927.12475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51927.12475.1
Unique Nameprot_H-elongata_contig51927.12475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: D7FN44_ECTSI (Outer row dynein assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN44_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 3.590e-51
Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 0
Query:    1 TLDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 112
            TLD+QHNRINDP+VV +VSAMHDLRVLYL+GNPVVK I HYRKT+VSKC  LKYLDDRPVF +ER RC AWS+GMA GG+SRAQEAEREEM +IR++KR AE+RQY AFE +
Sbjct:   90 TLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKSIRHYRKTLVSKCATLKYLDDRPVFDDERCRCAAWSKGMAEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQM 201          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A7S3Y6C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C6_HETAK)

HSP 1 Score: 133 bits (335), Expect = 1.390e-35
Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 TLDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGG-LSRAQEAEREEMGRIRDAKREAEERQYTAFENV 112
            TLD+QHN+I+D  +V VV+ M +LRVLYL+GNPVVK + HYRK++VS C  L+YLDDRPVF +ERRR +AW+RG  AGG L  A  AEREE+ R+R+ KR AEER + A E +
Sbjct:  149 TLDIQHNKIDDVGIVDVVTTMPNLRVLYLQGNPVVKDVRHYRKSLVSGCRELRYLDDRPVFEDERRRTDAWARGFRAGGTLDAANAAEREEIRRVREEKRCAEERNFLAMEQM 261          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A8K1CJQ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJQ4_PYTOL)

HSP 1 Score: 126 bits (317), Expect = 4.370e-32
Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENVCCQPR 117
            LD+Q NRINDP+++++++ M  L+VLYL+GN VVKHI  YRKT++ +C  LKYLDDRPVF EERRR EAW + + A  G    AQEAEREEM RIR  KR+ + + +  FE +  + R
Sbjct:  141 LDIQSNRINDPKILEILAEMPSLKVLYLQGNDVVKHIKQYRKTMIYRCRKLKYLDDRPVFDEERRRVEAWGQALEAANGDYKAAQEAEREEMDRIRQEKRDRDHQNFLMFEEMMAEGR 258          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: T0QTZ5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QTZ5_SAPDV)

HSP 1 Score: 119 bits (297), Expect = 1.370e-29
Identity = 63/113 (55.75%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 112
            LD+Q NRI D +VV +++AM +LRVLYL+GN VVKHI HYRKTI+S+C  L+YLDDRPVF EERRR  AW R M    G +  A EAER E+  IR  K++ +E  +  FE++
Sbjct:  141 LDIQSNRIADVDVVDILAAMPNLRVLYLQGNDVVKHIKHYRKTIISRCKELRYLDDRPVFDEERRRVTAWGRVMEETNGDVDAALEAERAELALIRQEKKDKDEANFRYFEDM 253          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: K3WU80_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU80_GLOUD)

HSP 1 Score: 116 bits (291), Expect = 4.880e-29
Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENVCCQPR 117
            LD+Q NR+ D  +V +++ M +L+VLYL+GN VVKHI  YRKT+V +C  LKYLDDRPVF +ERRR EAW + + A  G    AQEAER+EM  IR  K+E +E  +  FE +  + R
Sbjct:  141 LDIQSNRVTDVNIVDILAQMPELKVLYLQGNDVVKHIKQYRKTLVYRCRKLKYLDDRPVFDDERRRVEAWGKALDASQGDYKAAQEAERDEMDAIRREKKERDELNFLHFEQMMIEGR 258          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A7S0K1K9_CAFRO (Hypothetical protein (Fragment) n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K1K9_CAFRO)

HSP 1 Score: 115 bits (288), Expect = 5.690e-29
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFE 110
            LDL+ N I+DP V+ V++AM  LRVLYL+GNPVVK I HYRKT++S+   L++LDDRPVF EER R  AW+ GM AGG   A   ER  +   +   REA+ER + AFE
Sbjct:  144 LDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 252          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A3L6V2M5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V2M5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.940e-29
Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGM--AAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 112
            LD+Q NRI DP VV V++ M +LRVLYL+GN VVKHI  YRKT+V++C NL+YLDDRPVF +ERRR  AW + +    G +  A +AER+E+  IR  K++ +E  +  FE +
Sbjct:  138 LDIQSNRIADPAVVDVLAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKVLENTNGDMDAALQAERDELAVIRQEKKDKDEANFRYFEEI 250          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: F0YSA6_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSA6_AURAN)

HSP 1 Score: 112 bits (280), Expect = 1.470e-28
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 TLDLQHNRINDPE-VVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGG-LSRAQEAEREEMGRIRDAKREAEERQYTAFENVCCQPR 117
            TLD+Q N + D E V+ +   M DLRVLY +GNP VK + +YRK ++S+   L+YLDDRPVF +ERRRCEAW+RG A GG L  A EAER E+ +IR  K+ AE+++   FEN     R
Sbjct:   57 TLDVQANGLADGEGVLAIFKQMPDLRVLYCQGNPFVKELRNYRKRMISEIKTLRYLDDRPVFEDERRRCEAWARGFAEGGTLDAANEAERAEIAQIRADKKAAEDKRVRDFENFIADAR 175          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A1V9YZD4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZD4_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.900e-28
Identity = 63/113 (55.75%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAA--GGLSRAQEAEREEMGRIRDAKREAEERQYTAFENV 112
            LD+Q NRIND  VV V++ M +LRVLYL+GN VVKHI  YRKTI+ +C  L+YLDDRPVF EERRR  AW R M    G L  A EAER E+  IR  K++ +E  +  FE +
Sbjct:  141 LDIQSNRINDATVVDVLAQMTNLRVLYLQGNDVVKHIKQYRKTIIYRCKELRYLDDRPVFDEERRRVTAWGRAMEETNGDLEAALEAERAELAVIRQEKKDKDEANFRYFEEM 253          
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Match: A0A812VQF0_9DINO (DNAAF1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VQF0_9DINO)

HSP 1 Score: 115 bits (288), Expect = 2.410e-28
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    2 LDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCTNLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKREAEERQYTAFE 110
            LDL+ N I+DP V+ V++AM  LRVLYL+GNPVVK I HYRKT++S+   L++LDDRPVF EER R  AW+ GM AGG   A   ER  +   +   REA+ER + AFE
Sbjct:  208 LDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51927.12475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN44_ECTSI3.590e-5176.79Outer row dynein assembly protein n=1 Tax=Ectocarp... [more]
A0A7S3Y6C6_HETAK1.390e-3560.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8K1CJQ4_PYTOL4.370e-3254.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0QTZ5_SAPDV1.370e-2955.75Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
K3WU80_GLOUD4.880e-2951.69Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S0K1K9_CAFRO5.690e-2955.05Hypothetical protein (Fragment) n=2 Tax=Cafeteria ... [more]
A0A3L6V2M5_9STRA5.940e-2952.21Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
F0YSA6_AURAN1.470e-2852.10Uncharacterized protein (Fragment) n=2 Tax=Aureoco... [more]
A0A1V9YZD4_9STRA1.900e-2855.75Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A812VQF0_9DINO2.410e-2855.05DNAAF1 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..104
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 2..109
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..63
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..78
e-value: 3.8E-15
score: 57.3
IPR027734Dynein assembly factor 1, axonemalPANTHERPTHR45973:SF9DYNEIN ASSEMBLY FACTOR 1, AXONEMALcoord: 2..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51927contigH-elongata_contig51927:1118..1641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51927.12475.1mRNA_H-elongata_contig51927.12475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51927 1118..1641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51927.12475.1 ID=prot_H-elongata_contig51927.12475.1|Name=mRNA_H-elongata_contig51927.12475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
TLDLQHNRINDPEVVKVVSAMHDLRVLYLKGNPVVKHIHHYRKTIVSKCT
NLKYLDDRPVFYEERRRCEAWSRGMAAGGLSRAQEAEREEMGRIRDAKRE
AEERQYTAFENVCCQPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR027734DNAAF1