mRNA_H-elongata_contig51820.12460.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: D8LFB1_ECTSI (Creatinase_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB1_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.300e-31 Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQ 204
++S+LR M GVS YLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVT ++ALMWTDGRYFLQ
Sbjct: 35 KLSLLRAAMQARGVSAYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTHTKALMWTDGRYFLQ 102
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: A0A6H5KL17_9PHAE (Creatinase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL17_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.160e-29 Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQ 204
++S+LR M GVS YLVETQDAH SEYVADHDKRREWLTGFTGSAGTALVT ++ALMWTDGRYFLQ
Sbjct: 35 KLSLLRAAMQARGVSAYLVETQDAHHSEYVADHDKRREWLTGFTGSAGTALVTHTKALMWTDGRYFLQ 102
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: UPI0018F28BF7 (aminopeptidase P family N-terminal domain-containing protein n=1 Tax=Petrotoga sp. 9PW.55.5.1 TaxID=1308979 RepID=UPI0018F28BF7) HSP 1 Score: 99.8 bits (247), Expect = 2.210e-25 Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSSCAPITYLRPPG 261
R++ LRE M K G++ Y+V T D HQSEY+AD+ K R W++GFTGSAGT ++T+ EA++WTDGRYF+Q + +SS + + PG
Sbjct: 6 RINRLRELMQKMGITAYVVSTSDPHQSEYIADYYKTRVWISGFTGSAGTVVITQKEAILWTDGRYFIQAEKELESSGIKLYKIGIPG 92
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: A0A1I8HGG2_9PLAT (Uncharacterized protein n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HGG2_9PLAT) HSP 1 Score: 101 bits (252), Expect = 2.580e-23 Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 13 LRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSS 228
LR+ M +H ++ YLV ++DAH SEYVAD DKRR LTGFTGSAGTALVTESEALMWTDGRYFLQ + S+
Sbjct: 12 LRQLMSRHQLNAYLVPSEDAHMSEYVADCDKRRAQLTGFTGSAGTALVTESEALMWTDGRYFLQAEQQMDSN 83
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: A0A7Y2MSL4_9BACT (Aminopeptidase P family protein n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y2MSL4_9BACT) HSP 1 Score: 99.4 bits (246), Expect = 2.050e-22 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSS 228
R+++LR M KHG+ Y++ T D HQSEYVADH K REW++GFTGSAGT ++T++ A +WTD RYF+Q + SS
Sbjct: 6 RINLLRNEMRKHGLDAYIIPTNDPHQSEYVADHWKSREWISGFTGSAGTVVITQNHAGLWTDSRYFIQAEEELSSS 81
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: A0A4R3L0C5_9FIRM (Xaa-Pro aminopeptidase n=1 Tax=Keratinibaculum paraultunense TaxID=1278232 RepID=A0A4R3L0C5_9FIRM) HSP 1 Score: 99.4 bits (246), Expect = 2.050e-22 Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSSCAPITYLRPPG 261
R++ LR+ M + G++ Y++ T D HQSEY+ADH K R W++GFTGSAGT +VTE EA++WTDGRYF+Q + K S + + PG
Sbjct: 6 RINNLRKLMKQRGITAYIIPTSDPHQSEYLADHYKTRVWISGFTGSAGTVVVTEDEAILWTDGRYFIQAEKELKDSGIKLYKIGIPG 92
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: A0A265Q4Q2_9FIRM (Peptidase M24 n=2 Tax=Tissierella TaxID=41273 RepID=A0A265Q4Q2_9FIRM) HSP 1 Score: 98.2 bits (243), Expect = 5.250e-22 Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSSCAPITYLRPPG 261
RVS LR M G++ Y+V T D HQSEYVAD+ K R W++GFTGSAGT ++T+ EA++WTDGRYF+Q ++ S + +R PG
Sbjct: 6 RVSKLRHLMKDRGITAYIVNTADPHQSEYVADYYKGRVWISGFTGSAGTVVITQEEAILWTDGRYFIQAENELSGSEYKLFKMRIPG 92
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: UPI0019C31066 (Aminopeptidase P family protein n=1 Tax=Tissierellaceae bacterium BX21 TaxID=2763679 RepID=UPI0019C31066) HSP 1 Score: 98.2 bits (243), Expect = 5.250e-22 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSSCAPITYLRPPG 261
RV LRE M + G+ Y+V T D HQSEYVAD+ K R W+TGFTGSAGTA++T+ EA++WTDGRYF+Q + S + + PG
Sbjct: 6 RVKKLRELMDEKGIVAYIVTTSDPHQSEYVADYYKDRAWITGFTGSAGTAVITQDEAILWTDGRYFIQAEKELTGSEYKLYKMNIPG 92
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: UPI00082EF31E (aminopeptidase P family protein n=1 Tax=Abyssisolibacter fermentans TaxID=1766203 RepID=UPI00082EF31E) HSP 1 Score: 97.8 bits (242), Expect = 7.170e-22 Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSSCAPITYLRPPG 261
R++ L++ M + ++V + DAHQSEYVADH K REW+TGFTGSAGTA++T E +WTDGRYF+Q ++ K S + +R PG
Sbjct: 6 RIAKLKDLMKSRNIDAFIVPSYDAHQSEYVADHWKCREWITGFTGSAGTAVITLDECGLWTDGRYFIQAENELKGSGVKLFKMREPG 92
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Match: A0A7S0RQ31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RQ31_9CHLO) HSP 1 Score: 90.9 bits (224), Expect = 9.340e-22 Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 RVSMLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTESEALMWTDGRYFLQVKHTKKSSCAPITYLRPP 258
++++LR+ M + GV+ Y+V T D HQSEYVADH RR++++ FTGSAGTA++T +AL+WTDGRYF Q + + C + R P
Sbjct: 11 KLAVLRKLMMEQGVAAYVVPTDDPHQSEYVADHFARRQFISDFTGSAGTAVITTDKALLWTDGRYFTQANNQLDAGCWTLMKDRMP 96 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51820.12460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51820.12460.1 >prot_H-elongata_contig51820.12460.1 ID=prot_H-elongata_contig51820.12460.1|Name=mRNA_H-elongata_contig51820.12460.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp MLRERMHKHGVSGYLVETQDAHQSEYVADHDKRREWLTGFTGSAGTALVTback to top mRNA from alignment at H-elongata_contig51820:3677..3937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51820.12460.1 ID=mRNA_H-elongata_contig51820.12460.1|Name=mRNA_H-elongata_contig51820.12460.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=261bp|location=Sequence derived from alignment at H-elongata_contig51820:3677..3937+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51820:3677..3937+ >mRNA_H-elongata_contig51820.12460.1 ID=mRNA_H-elongata_contig51820.12460.1|Name=mRNA_H-elongata_contig51820.12460.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig51820:3677..3937+ (Himanthalia elongata Himel1 dioecious)back to top |