prot_H-elongata_contig51799.12457.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51799.12457.1
Unique Nameprot_H-elongata_contig51799.12457.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length264
Homology
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BLAST of mRNA_H-elongata_contig51799.12457.1 vs. uniprot
Match: D8LE61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE61_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.560e-51
Identity = 111/233 (47.64%), Postives = 142/233 (60.94%), Query Frame = 0 
Query:   39 VSDLLKKSGLAESFIDTMVIFINQRFETLLQAFDAKGAACALALRLRRHVQAHDATMAALGIRTGRRRSAGRTND--------ESTCFRPSRESDQNCGLEEHDLHPVVLWRQWKRCGGYWPPQLPDPDDIEFGGPDGTLKFMSQLDDGTQVFLREISQHFLETSLPEDGEDFGAACRAAPRKVRYRGRAQRHEKKEAEYLRYIEEATNRLAQLKSIVLEPVLCEVLMHQVVG 263
            +S LL+KSG+ +SF+D+MV+F+++R   L+     K AA A A RLR+HVQAHDAT  ALGIR GR R +             ES    P+   D     EEHD+  V LWRQW   GG+WPPQ+PDP+D  F G DGT +F+S+LD+GT +FL+EIS+  LET+LPED E+  AA          RG         A+  R   E  NRLAQLKS VLEP+LC++L  QVV 
Sbjct:    1 MSGLLRKSGMVDSFVDSMVVFVDRRIGALVSVMSPKDAAYAFARRLRQHVQAHDATTLALGIRAGRTRKSSENIKSQWDENVAESVGEGPAATGDGE-ETEEHDVQAVHLWRQWTCSGGFWPPQMPDPNDPVFDGLDGTEEFLSKLDEGTHLFLKEISRDILETALPEDAEELRAASGGT------RGAG-------ADSSRSFMETANRLAQLKSGVLEPMLCQMLTQQVVS 219
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BLAST of mRNA_H-elongata_contig51799.12457.1 vs. uniprot
Match: A0A6H5KAD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD1_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.230e-46
Identity = 104/221 (47.06%), Postives = 133/221 (60.18%), Query Frame = 0 
Query:   51 SFIDTMVIFINQRFETLLQAFDAKGAACALALRLRRHVQAHDATMAALGIRTGRRRSAG--------RTNDESTCFRPSRESDQNCGLEEHDLHPVVLWRQWKRCGGYWPPQLPDPDDIEFGGPDGTLKFMSQLDDGTQVFLREISQHFLETSLPEDGEDFGAACRAAPRKVRYRGRAQRHEKKEAEYLRYIEEATNRLAQLKSIVLEPVLCEVLMHQVVG 263
            SF+D++V+FI++R + L+     K AA A A RLR+HVQAHDAT  ALGIR GR R +         +   ES   RP+   D     EEHD+  V LWRQW   GG+WPPQ+PDP+D  F G DGT +F+S+LD+G  +FL+EIS+  LET+LPED E+  AA          RG         A+  R   E  NRLAQLKS VLEP+LC++L   VV 
Sbjct:   20 SFVDSVVVFIDRRIDALVSVMSPKDAAYAFARRLRQHVQAHDATTLALGIRAGRTRKSSENIKGQRDQNVTESVGERPAATGDGE-ETEEHDVQAVQLWRQWTCSGGFWPPQMPDPNDPVFDGLDGTEEFLSKLDEGIHLFLKEISRDILETALPEDAEELRAASGGT------RGAG-------ADSSRSFMETANRLAQLKSGVLEPMLCQMLTQHVVS 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51799.12457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE61_ECTSI4.560e-5147.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAD1_9PHAE2.230e-4647.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51799contigH-elongata_contig51799:485..2647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51799.12457.1mRNA_H-elongata_contig51799.12457.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51799 485..2647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51799.12457.1 ID=prot_H-elongata_contig51799.12457.1|Name=mRNA_H-elongata_contig51799.12457.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=264bp
LLGSWDDDDKCFLQALKGFVESAVNLLDANSEGVGSRVVSDLLKKSGLAE
SFIDTMVIFINQRFETLLQAFDAKGAACALALRLRRHVQAHDATMAALGI
RTGRRRSAGRTNDESTCFRPSRESDQNCGLEEHDLHPVVLWRQWKRCGGY
WPPQLPDPDDIEFGGPDGTLKFMSQLDDGTQVFLREISQHFLETSLPEDG
EDFGAACRAAPRKVRYRGRAQRHEKKEAEYLRYIEEATNRLAQLKSIVLE
PVLCEVLMHQVVG*
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