mRNA_H-elongata_contig51646.12438.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.080e-48 Identity = 75/91 (82.42%), Postives = 79/91 (86.81%), Query Frame = 1
Query: 1 DGCTLTRHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHRK 273
DG RHV+LPK AK++P SRLLTEDEWR LGVQQSRGWQHYAVH PEPHILLFRRPLGTNPVTG+VDPELEREAKEKYA ELS G RK
Sbjct: 12 DGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.970e-40 Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 19 RHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSG 264
RHV+LPK +A+ +P RLLTE EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+PVTGKV+ ELEREAKEKYA ++
Sbjct: 19 RHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNGA 100
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.260e-39 Identity = 61/90 (67.78%), Postives = 75/90 (83.33%), Query Frame = 1
Query: 1 DGCTLTRHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHR 270
DG RHV+LPK+ A+ +P +R LTE EWR++GVQQSRGW+HYA H+PEPHILLFRRPLGT+PV+G+VDPELEREA+EKY EL+ R
Sbjct: 14 DGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELAVNQR 103
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.960e-39 Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 1
Query: 19 RHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHRK 273
RHV+LPK +AK +P +RLL E EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+PVTGKVD ELER+AK+ Y L+ RK
Sbjct: 38 RHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.190e-38 Identity = 59/80 (73.75%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 19 RHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELS 258
RHV+LPK++AK +P SR+LTE EWR LGVQQSRGW HYA+HRPEPHILLF+RPLGT+PV+GKVDP LE+EAK+ Y EL+
Sbjct: 19 RHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELA 98
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2VEK7_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEK7_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.520e-38 Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 1
Query: 1 DGCTLTRHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 243
D RHV+LPK +AK +P SRLLTE EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G+VDPELER A+++Y
Sbjct: 31 DDVNEYRHVILPKELAKTLPKSRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELERAARDEY 111
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.680e-38 Identity = 57/81 (70.37%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 1 DGCTLTRHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 243
D RHV+LPK++AK +P +RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGT+P +G+VDPELEREA+E+Y
Sbjct: 15 DTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEY 95
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA) HSP 1 Score: 132 bits (333), Expect = 4.010e-38 Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 1
Query: 19 RHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYA--LELSSG 264
RHV+LPK +AK +P +RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGT+PVTGK+DP LEREAK+ Y LEL+
Sbjct: 37 RHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLELNQA 120
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO) HSP 1 Score: 131 bits (330), Expect = 5.240e-38 Identity = 57/75 (76.00%), Postives = 68/75 (90.67%), Query Frame = 1
Query: 19 RHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 243
RHV+LPK +AK +P SRLLTE EWRS+GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G+VDPEL + A+E+Y
Sbjct: 21 RHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEY 95
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S3P5A6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5A6_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.820e-38 Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 1
Query: 1 DGCTLTRHVMLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 243
D RHV+LPK +AK +P SRLLTE EWRS+GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G++DPEL R A+++Y
Sbjct: 46 DDVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRIDPELARAARDEY 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51646.12438.1 >prot_H-elongata_contig51646.12438.1 ID=prot_H-elongata_contig51646.12438.1|Name=mRNA_H-elongata_contig51646.12438.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPback to top mRNA from alignment at H-elongata_contig51646:3401..3897- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51646.12438.1 ID=mRNA_H-elongata_contig51646.12438.1|Name=mRNA_H-elongata_contig51646.12438.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=497bp|location=Sequence derived from alignment at H-elongata_contig51646:3401..3897- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51646:3401..3897- >mRNA_H-elongata_contig51646.12438.1 ID=mRNA_H-elongata_contig51646.12438.1|Name=mRNA_H-elongata_contig51646.12438.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig51646:3401..3897- (Himanthalia elongata Himel1 dioecious)back to top |