prot_H-elongata_contig5164.12437.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5164.12437.1
Unique Nameprot_H-elongata_contig5164.12437.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length245
Homology
BLAST of mRNA_H-elongata_contig5164.12437.1 vs. uniprot
Match: D8LHQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ5_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 1.700e-65
Identity = 119/234 (50.85%), Postives = 161/234 (68.80%), Query Frame = 0
Query:   14 GDDDDSL-TYQVDVVTDTGPTSSYWNGAKFTLAVSTPVFGQSQKYGTIIVSGTVSEDDEVPETTTANVERGCYMLYTTTGSRPYDVLWEVNAMKDDELYLAAEGGGKDRQIFGVGGALCGLSTCYQTCYMEAEDESTDECASMGDLLAPLTETAGAQCNCTLEEEMELRLLCLNVQDCESTSQCYVM-NANETIGHAATLRVTTYVSLTSSDTVTSNALEVAMAQWLDFDSDYV 245
            GD+D++   YQV++V  TG TS+ WNGA + L V T V GQ+    +++  GT++E D  P T T N+ERGCY+LYTT G+RPYDV+W+V      E+Y +AEGGG+D   FG+GGALCG+S CY+ CY E +D   DEC S GDLLAP  E AGA C CT +E+++LR+ CL   DCES SQCY++ +A   I  A TLR+ TYV++ +++ V  + +E A+AQWLD D  YV
Sbjct:  683 GDNDNTGGNYQVEIVASTGDTSTNWNGAAYRLEVGTVVPGQTLPSSSLLAFGTINEGDTSPWTQTLNLERGCYVLYTTAGTRPYDVVWQVEV--GGEVYQSAEGGGQDYHTFGLGGALCGMSDCYRLCYEEHDDRDADECKSFGDLLAPSDEPAGANCTCTQDEQIDLRIECLGRDDCESRSQCYLLGDAAAEITMAPTLRIVTYVTVVTTN-VYVDGMETAVAQWLDLDPAYV 913          
BLAST of mRNA_H-elongata_contig5164.12437.1 vs. uniprot
Match: A0A6H5L752_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L752_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 5.340e-60
Identity = 112/225 (49.78%), Postives = 147/225 (65.33%), Query Frame = 0
Query:   22 YQVDVVTDTGPTSSYWNGAKFTLAVSTPVFGQSQKYGTIIVSGTVSEDDEVPETTTANVERGCYMLYTTTGSRPYDVLWEVNAMKDDELYLAAEGGGKDRQIFGVGGALCGLSTCYQTCYMEAEDESTDECASMGDLLAPLTETAGAQCNCTLEEEMELRLLCLNVQDCESTSQCYVM-NANETIGHAATLRVTTYVSLTSSDTVTSNALEVAMAQWLDFDSDYV 245
            YQV++V  TG TS       + L V T V GQS    +++  GT++E D  P T T N+ERGCY+LYTT G+RPYDV+W+V      ++Y  A GGGKD   FG+GGALCG+S CY+ CY E +D   DEC S GDLLAP  E AGA C CT +EE++LR+ CL   DCES SQCY++ +A   I  A TLR+  YV++ +++ V  + +E A+AQWLD D  YV
Sbjct:  683 YQVEIVASTGDTSXXXXXXXYRLEVGTVVPGQSLPSSSLLAFGTINEGDISPWTQTLNLERGCYVLYTTAGTRPYDVVWQVEV--GGKVYQNAAGGGKDYHSFGLGGALCGMSDCYRLCYEEHDDRDADECKSFGDLLAPSDEPAGANCTCTQDEEIDLRIECLGRDDCESRSQCYLLGDAAAEITTAPTLRIVMYVTIVTTN-VYVDGMETAVAQWLDLDPAYV 904          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5164.12437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHQ5_ECTSI1.700e-6550.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L752_9PHAE5.340e-6049.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5164contigH-elongata_contig5164:2128..9069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5164.12437.1mRNA_H-elongata_contig5164.12437.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5164 2128..9069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5164.12437.1 ID=prot_H-elongata_contig5164.12437.1|Name=mRNA_H-elongata_contig5164.12437.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=245bp
FAGNGQRRLSSTDGDDDDSLTYQVDVVTDTGPTSSYWNGAKFTLAVSTPV
FGQSQKYGTIIVSGTVSEDDEVPETTTANVERGCYMLYTTTGSRPYDVLW
EVNAMKDDELYLAAEGGGKDRQIFGVGGALCGLSTCYQTCYMEAEDESTD
ECASMGDLLAPLTETAGAQCNCTLEEEMELRLLCLNVQDCESTSQCYVMN
ANETIGHAATLRVTTYVSLTSSDTVTSNALEVAMAQWLDFDSDYV
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