prot_H-elongata_contig516.12428.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig516.12428.1
Unique Nameprot_H-elongata_contig516.12428.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length872
Homology
BLAST of mRNA_H-elongata_contig516.12428.1 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE)

HSP 1 Score: 811 bits (2096), Expect = 3.020e-280
Identity = 461/895 (51.51%), Postives = 603/895 (67.37%), Query Frame = 0
Query:    7 VEEWEG----SAGEELQTIPGVEGAVGSELTVQGVLEVGEYIGILEVEIYVEVDEVEAVGVPASSRINILATATTDEASVIHTLDNDTSDESAWTCSSG-EICEATYDFGDVESLEQVRIAFASNTDA-GGEFAVFTAGGSGVFSSLRTGIEA--GGRPVGNDGLQTFGGVRALAQYVKIKAT-PATGGTIALTEASSRPFRDVEFRIGEDAPERAVGEKPWLKEAGPLP-----AGRQDDRNYEFPAYDPRSSSDGGCDSPGVFNGCHIFYIKDGNMSADSRWTCGPTTLGDDTQMSSPYDDGSICAVEFDLNTYRYVRQIQLAFHRGNEQHTEFAIQAYTKNYAWVTVVPSAISSGNTTGLQTFDVSVHTDVLRIVPAFQSVSQMVSIKEMVILEKSKKDFVEGTVPVFHMDRNFTPAQSLVCTTQDGEGITEVTTHFKFDIPDAGDDYRINFADATLSGLRMKFPADRSFTFDIVYSSSGEDVTQTFTSAGGKKTFETFTLSTPAIDD--IEIVAVEGPTFDYNPSYPTLRVVDFQILGEIVMTSGTFQVMETYYNGAFGWGRLPDLIAEASADQEIIMTAICETKGAAFDGTDCVGELDDTPIYLPPVPRGSGFFVNGPIFLKSNVTLEGDWNAEYGDWSYFWVYDGPNIYSTGEDAVIVIDGATSVSLEYIYFSGWWEDVTGSIVPGTVGNLCLEVRNSQDLQLGGELEFNSARSGAARFTDSSNITAFAFWVGE-YETGNFLELTRVDDFYISAPPEMSGLLVDACTNVIFEGAYDTFEIPNPGLDPPT-GGEQTSNVVIIGDSSGIVFKNMPVGSGIEPRILMESTDPLTLDDIPRYEEAETGDCIVQVPEGSTEETLVQLN----SET--------ILTLSGICWVL 871
            +E WE     +A  E+Q IPGVEG  GS+L + G +E+GE + ILEVEIYV VDE+EA GV AS+R  + ATA+ D AS ++TLD D S  S+WTCS+G E+CE T+D   VESLEQ+RIAF+  TDA GGEF+V TAG SGVFS++RTGIEA    RP+G DGLQT GGVRA+A+YVK+  T P +GG+IA++E        VEFR+GED P R V EK WLK  GPLP      G QD      P++D R   DGGCD P  F GCH+FYIKD NM  DSRWTCGP   G D      +D    C +EF LN +RY+RQIQ+AF+ G+ +H EF+I+AYT    WVTVVPSAISS + +  QTFDV+VHT+++R++P F  ++  + IKE+V LEK KKDF+EGT+PVF      T         +DG  + ++ T F+FD+   G+   +N   +T++ LRM+FPADRSF F + Y    + + + FTSAGG KT+ETFTLSTPA  D  +E+VAV GPTFD+ P YP LRVVD Q++GE+    G   V+ T       WG +PD+I E  ++Q+ +M AICE KG+ FDG DCVGELDD+ + +    +   ++++GPIFLKS V ++GDW  EY  + +  +YDG +   TGEDA++V+DGAT   L  + F    ED TG IVPGTVGN  L VRNSQD++   E+   S R+G A FTDS N++AF F+ G+  ETGN++ELTRVDD +  A P MSG+L+D C +++FEG  D F IP+    PP  GG+QT+NVV+ GDSSGIVF+N  V +G EPRIL+EST+PLTLD++ RY +AE GDCIV+VPEG+ E+ +VQ+     S+T        +L  SG CWVL
Sbjct:  136 LEAWEADPDLTAAGEMQEIPGVEGLTGSDLYIYGDMEIGESLRILEVEIYVAVDEIEATGVSASTRAFVTATASADSASAMNTLDGDVSASSSWTCSAGDEVCEVTFDLQAVESLEQLRIAFSEETDAVGGEFSVMTAGESGVFSAVRTGIEADPAARPLGTDGLQTVGGVRAMARYVKLGVTVPTSGGSIAISE--------VEFRVGEDVPARPVAEKAWLKTTGPLPRAVNPGGSQD------PSFDIRLPEDGGCDPPIHFEGCHVFYIKDENM--DSRWTCGPLVAGSDRNS---WD----CDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAISSEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTSNDD---EEEDGADV-DIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMVEY----DGIVEEFTSAGGPKTWETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRKEPGYIDVVTTTIET---WGVVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKL--QFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRK-EDPTGDIVPGTVGNTNLAVRNSQDIRFS-EMGLFSGRNGGATFTDSRNMSAFIFYNGDGLETGNYMELTRVDDVHFRALPNMSGVLIDTCNDIVFEGV-DEFAIPSAYFSPPVAGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVL 991          
BLAST of mRNA_H-elongata_contig516.12428.1 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI)

HSP 1 Score: 760 bits (1963), Expect = 2.020e-260
Identity = 440/884 (49.77%), Postives = 579/884 (65.50%), Query Frame = 0
Query:    1 MDGDVIVEEWEGSAGE-ELQTIPGVEGAVGSELTVQGVLEVGEYIGILEVEIYVEVDEVEAVGVPASSRINILATATTDEASVIHTLDNDTSDESAWTCSSGE-ICEATYDFGDVESLEQVRIAFASNTDAGGEFAVFTAGGSGVFSSLRTGIEAGGRPVGNDGLQTFGGVRALAQYVKIKATPA-TGGTIALTEASSRPFRDVEFRIGEDAPERAVGEKPWLKEAGPLPAGRQDDRNYEFPAYDPRSSSDGGCDSPGVFNGCHIFYIKDGNMSADSRWTCGPTTLGDDTQMSSPYDDGSICAVEFDLNTYRYVRQIQLAFHRGNEQHTEFAIQAYTKNYAWVTVVPSAISSGNTTGLQTFDVSVHTDVLRIVPAFQSVSQMVSIKEMVILEKSKKDFVEGTVPVFHMDRNFTPAQSLVCTTQDGEGITEVTTHFKFDIPDAGDDYRINFADATLSGLRMKFPADRSFTFDIVYSS--SGEDVTQTFTSAGGKKTFETFTLSTPAIDDIE----IVAVEGPTFDYNPSYPTLRVVDFQILGEIVMTSGTFQVMETYYNGAFGWGRLPDLIAEASADQEIIMTAICETKGAAFDGTDCVGELDDTPIYLPPVPRGSGFFVNGPIFLKSNVTLEGDWNAEYGDWSY---FWVYDGPNIYSTGEDAVIVIDGATSVSLEYIYFSGWWEDVTGSIVPGTVGNLCLEVRNSQDLQLGGELEFNSARSGAARFTDSSNITAFAFWVGEYETGNFLELTRVDDFYISAPPEMSGLLVDACTNVIFEG-AYDTFEIPNPGLDPPTGGEQTSNVVIIGDSSGIVFKNMPVGSGIEPR-ILMESTDPLTLDDIPRYEEAETGDCIVQVPEGSTEETLVQLNSETILTLSGICWV 870
            +DG  I+EEW+   G  ELQ IPG+EG  G  L+++GV   G+Y+ ILEV IY+ VDEVE +GV AS+R +I ATATT+ AS I TLD D +D S+W C S E  CE TYD   VESL+Q+RIAF++NTDAG +  V  AG SGVFS +R+G+EAGGRP+G+DGLQTFGGV ALA+YV+I+A P+  GG I + E        VE R+G DAP R V EK WL+  G LP    D  +   P +D R  S GGCDSP  F GCH++YIKDG+MS DSRWTCGP   G+   + S  +D   C +   LN +RYVRQIQ AFH G+EQ+ EF+I+         TVV SAISSG++T  QTFD+ VHT+ +R+VP FQ V Q + IKEMVILE  +  F+ GT+PVF     F P          G+   +V T F+F +P   D ++     +T++ ++++FP+DR F F + Y    + E++ + FTSAGG  T ETFTLS PA  D+E    I AV GPTF+  P YPTLRV+DFQI+GEI    G F+V+ T       W  +PD+I +  +DQE IMT ICETKG AFDGTDCVGELDD+ +++    +   +F++GP+FLKS VTL G      GD+SY      Y   + ++  EDAVIVIDG T   ++ +Y       +TG I PGT+GNLCLEVR SQDL+L  E++ + AR+GAARF DS NI+      GEYETGNF+E+  VDDF+    PE++GL ++   NV+ +G A + +E+P P   PPTGG+Q ++VVI G SSGIVF++  + +G +   +LMEST+PLTLD+I  YE AE+GDCI+ VP  S ++ +VQLNS  IL+  G CWV
Sbjct:  132 VDGATILEEWDAVPGSSELQEIPGLEGVEGGRLSIEGVEGAGDYLAILEVGIYIVVDEVEPLGVSASTRTSISATATTNNASAILTLDGDATDGSSWACLSSEGACEITYDLQAVESLQQLRIAFSTNTDAGAKLNVLAAGESGVFSYVRSGLEAGGRPLGSDGLQTFGGVLALARYVRIEAVPSGEGGAIVINE--------VELRVG-DAPVRPVSEKAWLQPTGMLPLAA-DTGSSGHPNFDNREPSAGGCDSPAHFEGCHVYYIKDGDMSDDSRWTCGPLAAGN---LVSNNED---CHLMLSLNYFRYVRQIQFAFHMGDEQYNEFSIE---------TVVSSAISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYWF-PRGDGGDDDSSGDSDEDVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEIETDEEIVEEFTSAGGPDTMETFTLSAPA--DVERFVYITAVSGPTFESQPDYPTLRVIDFQIVGEIKKDPGHFEVVTTTMTV---WRVVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISM--KNGHYFLDGPVFLKSGVTLSG------GDYSYNEPSRTYLVLHNHTRLEDAVIVIDGVTGGEVDSVYIEHQ-TPMTGDITPGTLGNLCLEVRGSQDLKLA-EIDCHQARTGAARFVDSKNISVSVIRDGEYETGNFMEVDGVDDFHFEGIPEVAGLRIEDSNNVVLQGGASNVYEVPTPVFLPPTGGDQAASVVITGASSGIVFQDCSIYAGGDTAPVLMESTEPLTLDNILGYEAAESGDCIIDVPPESGDDLIVQLNSYAILSKDGDCWV 974          
BLAST of mRNA_H-elongata_contig516.12428.1 vs. uniprot
Match: D8LG22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG22_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 1.710e-134
Identity = 230/461 (49.89%), Postives = 309/461 (67.03%), Query Frame = 0
Query:  427 EVTTHFKFDIPDAGDDYRINFADATLSGLRMKFPADRSFTFDIVYSSSGEDVTQTFTSAGGKKTFETFTLSTPAIDD--IEIVAVEGPTFDYNPSYPTLRVVDFQILGEIVMTSGTFQVMETYYNGAFGWGRLPDLIAEASADQEIIMTAICETKGAAFDGTDCVGELDDTPIYLPPVPRGSGFFVNGPIFLKSNVTLEGDWNAEYGDWSYFWVYDGPNIYSTGEDAVIVIDGATSVSLEYIYFSGWWEDVTGSIVPGTVGNLCLEVRNSQDLQLGGELEFNSARSGAARFTDSSNITAFAFWVG-EYETGNFLELTRVDDFYISAPPEMSGLLVDACTNVIFEGAYDTFEIPNPGLDPPTGG-EQTSNVVIIGDSSGIVFKNMPVGSGIEPRILMESTDPLTLDDIPRYEEAETGDCIVQVPEGSTEETLVQLN----SET--------ILTLSGICWVL 871
            ++ T F+FD+P  GD   ++   +T++ LRM+FPADRSF F + Y     DV + FTSAGG KT+ETFTL+TPA  D  ++IVAV GPTFD+ P YP LRVVDFQ++GE+    G   V+ T       WG +PD+I E  ++Q+ +M AICE KG+ FDG DCVGEL+D+ + +        ++++GPIFLKS V ++G+W  EY  + +  +Y+G +   TGEDA++V+DGAT   L  + F    E+ TG IVPGTVGN  L VRNSQD+Q   E+   S R+G A FTDS N++AF F+ G E ETGN++ELTRVDD +  A P MSG+L D C +++FEG  D F IP     PP  G +QT+NVV+ GDSSGIVF+N  V +G EPRIL+EST+PLTLD++ RY +AE GDCIV+VPEG+ E+ +VQ+     S+T        +L  SG CWVL
Sbjct:   43 DIPTRFEFDLPIEGDYIDMDVPPSTVTALRMRFPADRSFVFMVEYG----DVVEEFTSAGGPKTWETFTLATPAEVDYGLDIVAVTGPTFDHIPDYPALRVVDFQVVGELRKEPGYIDVVTTTIET---WGVVPDVIGEGVSEQKNVMKAICEAKGSTFDGVDCVGELNDSEVTIKL--HFGDYYIDGPIFLKSGVFIDGEWQDEYPTFCWLVLYEGDSNTVTGEDAMVVVDGATGAELYGLAFVRK-EEPTGDIVPGTVGNTNLAVRNSQDIQFS-EMGLFSGRNGGATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGV-DDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFVVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVL 491          
BLAST of mRNA_H-elongata_contig516.12428.1 vs. uniprot
Match: D8LG23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG23_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 6.140e-116
Identity = 212/388 (54.64%), Postives = 271/388 (69.85%), Query Frame = 0
Query:    7 VEEWEG----SAGEELQTIPGVEGAVGSELTVQGVLEVGEYIGILEVEIYVEVDEVEAVGVPASSRINILATATTDEASVIHTLDNDTSDESAWTCSSG-EICEATYDFGDVESLEQVRIAFASNTDA-GGEFAVFTAGGSGVFSSLRTGIEA--GGRPVGNDGLQTFGGVRALAQYVKIKAT-PATGGTIALTEASSRPFRDVEFRIGEDAPERAVGEKPWLKEAGPLPAGRQDDRNYEFPAYDPRSSSDGGCDSPGVFNGCHIFYIKDGNMSADSRWTCGPTTLGDDTQMSSPYDDGSICAVEFDLNTYRYVRQIQLAFHRGNEQHTEFAIQAYTKNYAWVTVVPSAISSGNTTGLQTFDVSVHTDVLRIVPAFQSVSQMVSIKEM 385
            +E WE     +A  E+Q IPGVEG  GS+L + G +E+GE + ILEVEIY+ VDEVEA GV AS+R ++ ATA+ D  S ++TLD D S  S+WTCSSG E+CE T+D   VESLEQ+RIAF+  TDA GGEF+V  AG SGVFS++RTG+EA   GRPVG DGLQTFGGVRA+A+YVK+  T P +GGTIA++E        VE R+GED P R V EK WLK  GPLP       + + P+YD R   DGGCD P  F GCH+FYIKD NM  DSRWTCGP   G D    S +D    C ++F LN +RY+RQIQ+AF+ G+ +H EF+I+AYT    WVTVVPSAIS+ + +  QTFDV+VHT+++R++P F  ++  + IKE+
Sbjct:  136 LEAWEADPDLTAAGEMQEIPGVEGLTGSDLYIYGDMEIGESLRILEVEIYITVDEVEATGVSASTRASVTATASADSVSAMNTLDGDASAASSWTCSSGDEVCEITFDLQAVESLEQLRIAFSEETDAVGGEFSVMVAGESGVFSAVRTGLEADPAGRPVGTDGLQTFGGVRAMARYVKLGVTVPTSGGTIAISE--------VELRVGEDVPARPVAEKAWLKTTGPLPRAVSSGGSLD-PSYDIRLPEDGGCDPPIHFEGCHVFYIKDENM--DSRWTCGPLVAGSDR---SSWD----CELDFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAISAEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKEV 505          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig516.12428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JDS6_9PHAE3.020e-28051.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSQ6_ECTSI2.020e-26049.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LG22_ECTSI1.710e-13449.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG23_ECTSI6.140e-11654.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 252..394
e-value: 1.6E-6
score: 30.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 603..807

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig516contigH-elongata_contig516:5049..15695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig516.12428.1mRNA_H-elongata_contig516.12428.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig516 3480..16513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig516.12428.1 ID=prot_H-elongata_contig516.12428.1|Name=mRNA_H-elongata_contig516.12428.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=872bp
MDGDVIVEEWEGSAGEELQTIPGVEGAVGSELTVQGVLEVGEYIGILEVE
IYVEVDEVEAVGVPASSRINILATATTDEASVIHTLDNDTSDESAWTCSS
GEICEATYDFGDVESLEQVRIAFASNTDAGGEFAVFTAGGSGVFSSLRTG
IEAGGRPVGNDGLQTFGGVRALAQYVKIKATPATGGTIALTEASSRPFRD
VEFRIGEDAPERAVGEKPWLKEAGPLPAGRQDDRNYEFPAYDPRSSSDGG
CDSPGVFNGCHIFYIKDGNMSADSRWTCGPTTLGDDTQMSSPYDDGSICA
VEFDLNTYRYVRQIQLAFHRGNEQHTEFAIQAYTKNYAWVTVVPSAISSG
NTTGLQTFDVSVHTDVLRIVPAFQSVSQMVSIKEMVILEKSKKDFVEGTV
PVFHMDRNFTPAQSLVCTTQDGEGITEVTTHFKFDIPDAGDDYRINFADA
TLSGLRMKFPADRSFTFDIVYSSSGEDVTQTFTSAGGKKTFETFTLSTPA
IDDIEIVAVEGPTFDYNPSYPTLRVVDFQILGEIVMTSGTFQVMETYYNG
AFGWGRLPDLIAEASADQEIIMTAICETKGAAFDGTDCVGELDDTPIYLP
PVPRGSGFFVNGPIFLKSNVTLEGDWNAEYGDWSYFWVYDGPNIYSTGED
AVIVIDGATSVSLEYIYFSGWWEDVTGSIVPGTVGNLCLEVRNSQDLQLG
GELEFNSARSGAARFTDSSNITAFAFWVGEYETGNFLELTRVDDFYISAP
PEMSGLLVDACTNVIFEGAYDTFEIPNPGLDPPTGGEQTSNVVIIGDSSG
IVFKNMPVGSGIEPRILMESTDPLTLDDIPRYEEAETGDCIVQVPEGSTE
ETLVQLNSETILTLSGICWVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR011050Pectin_lyase_fold/virulence