prot_H-elongata_contig51595.12425.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51595.12425.1
Unique Nameprot_H-elongata_contig51595.12425.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
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BLAST of mRNA_H-elongata_contig51595.12425.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.600e-20
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:   10 FPAAHALSLLDAHASVMTDDREKAAFWTTVADLAKVLQQHVQGPAGRTSATLLQLIRD 67
            FPAA+ALSLLDAHAS + DDR++AAFWTT +DLAKVL QHVQGPAGR SA LLQLI++
Sbjct:  653 FPAANALSLLDAHASGIADDRDRAAFWTTASDLAKVLLQHVQGPAGRASAALLQLIQE 710
[Close]
BLAST of mRNA_H-elongata_contig51595.12425.1 vs. uniprot
Match: D8LHP3_ECTSI (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP3_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 9.030e-20
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0 
Query:   10 FPAAHALSLLDAHASVMTDDREKAAFWTTVADLAKVLQQHVQGPAGRTSATLLQLIRD 67
            FPAA+ALSLLDAHAS + DDR++A FWTT +DLAKVL QHVQGPAGR SA LLQLI++
Sbjct:  845 FPAANALSLLDAHASGIADDRDRATFWTTASDLAKVLLQHVQGPAGRASAALLQLIQE 902
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51595.12425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K608_9PHAE2.600e-2077.59Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
D8LHP3_ECTSI9.030e-2075.86Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013537Acetyl-CoA carboxylase, central domainPFAMPF08326ACC_centralcoord: 5..66
e-value: 1.4E-5
score: 23.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51595contigH-elongata_contig51595:1051..1746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51595.12425.1mRNA_H-elongata_contig51595.12425.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51595 1049..1746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51595.12425.1 ID=prot_H-elongata_contig51595.12425.1|Name=mRNA_H-elongata_contig51595.12425.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
SAGEEDSRNFPAAHALSLLDAHASVMTDDREKAAFWTTVADLAKVLQQHV
QGPAGRTSATLLQLIRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013537AcCoA_COase_cen