prot_H-elongata_contig51536.12420.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51536.12420.1
Unique Nameprot_H-elongata_contig51536.12420.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length730
Homology
BLAST of mRNA_H-elongata_contig51536.12420.1 vs. uniprot
Match: A0A6H5KG45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG45_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.020e-32
Identity = 278/847 (32.82%), Postives = 350/847 (41.32%), Query Frame = 0
Query:   11 RRLASHVEAEYAVAHYLAFDTFLPALTESLAKVAA---------------------AAAPSLRR------APFAEEDSSAKYVQRVKVKRTGSGRGELETVSSSGTR--------GMLELPPEACWEPPFLRRWPEAWSISPLSAPVETCPSSAAKSEDFFSAKPADGVSTGTDGAGGXXXXXGAGDETAANGITCGGG----GATPRRGRGHRVIITGRHFAHPAA-------WGADDMNNPAFGHPPSQAPSQHEID----------GSSSPQAEACVVAVKVTDENVEKAAVPNPAASGD----LRVREVVVRFD-DVEVPGRVISDTVVEAFAPPRARPGFVDVVVRVKGER--PGGDLSSDA-----PAAGDRGSKRWPRYSVLFRYCAPPPLFP------------PIVGV------KRGMNGGSIT------MVVGKDRRNASSKILQD-------NVIEGGIKNNLKSCSWTSSGENASEATTP-SLVVNGRYGPILLDDGEQDDIFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGESQDVHVVTMPTEDEVRSARGGLGALAKAADNGDGDCPHFEENKANSTSFEAV-------------NFVDPYCTAGVGESCSQSTIAGPVKQVPLEDPNSLRGERKNFEELSTKACFTIGVGESSVNSGIAGSEGATLHGERKNSKRGGRNCEKFSTSVDGRMSAEDEFESNAA-EQVRSSLLC-----------QP---VPYELPTPAEVDWQRGLGALLEATSVLADTFSAADVIGGVSLGMGLVGAGPPAADGGDHFVTVAGPPWSERDPRVSQG 729
            R LA HV+++YA +H LAFDTFLPAL    A  AA                     A+APS         AP A   +  +      VK  G   G   T ++S T         G      +  WE PF RRWPE W++SP    V T    A      F  K + GV+    G+  XXXXX                    G      +GHR++ITGR+FAHP A        G+D                +  +           G +S + E      K   +    A        GD       R V+VRF  D+ VPG V+SDT+VEAFAP R+  GFVDV V V  E    GGDL+SD+      AA   G +   R++ + RY  P                 P+ G+      K+   G S T        V  D  +  +            N  EGG+    + C     G          ++VVNGRYGP+ LDDGE      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            A A    +GD     +  A + +                 N V      G G+  + + I  P       +P  L   +K+F  +S          +++V      S  AT                            E E   +AA  Q+                 QP   VPY LPT A+ + +R L +L+  T  LADTFSA+D IGGVSLG GL GAGPP A GGDHF+T+AGPPW ++D RV  G
Sbjct:  375 RHLAHHVDSDYAASHALAFDTFLPALAAEQAVAAATAAKEEASLAPPETMGIATHPASAPSQGMTTEACLAPGAGTGAHGRTAAAA-VKGQGVMMGATTTATTSSTAEESVAVSLGEGNSGGDGRWEVPFFRRWPEVWAVSPTF--VHTTAVEADAVHPLFDRKGSAGVTVSGKGSSSXXXXXXXXXXXXXXXXXXXXXXXXXGTDRSSSQGHRILITGRNFAHPVAAADASTVLGSDGXXXXXXXXXXXXXXVERVVGTSGSGGDSFTGEASGRRELEQAGGKTAGKGDYLADDGGGGGDGDEIRRSNTRRVLVRFGRDLTVPGEVLSDTLVEAFAPARSEIGFVDVAVVVVAESGAAGGDLASDSIIATTAAAEQHGWRFGRRHAPMLRYRPPXXXXXXXXXXXXXXXXXPLSGMGQRGRKKKQRRGSSETGPQTGLQTVDGDGADYPAAXXXXXXXXXXXNAREGGVA--ARGCGGEGDGXXXXXXXXKEAVVVNGRYGPVPLDDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAEGSAAAGSGSNGDSTSTADISATADASTXXXXXXDGNMNGSPQNPVGGCNDDGGGDGANVAAIEAPAATAAAAEPAELLAGKKHFVVVSDVXXXXXXXEQTAV------SAAATTSKSTAAGPXXXXXXXXXXXXXXXXXEPEHEMPHSAAVSQIXXXXXXXXXXXXXXXXEQPPTAVPYSLPTHAQAERERELASLVADTWSLADTFSASDAIGGVSLGRGLDGAGPPPAQGGDHFLTIAGPPWPKQDARVVHG 1210          
BLAST of mRNA_H-elongata_contig51536.12420.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 6.620e-21
Identity = 123/383 (32.11%), Postives = 165/383 (43.08%), Query Frame = 0
Query:   13 LASHVEAEYAVAHYLAFDTFLPALTESLAKVAAAAAPSLRRAPFAEEDSSAKYVQRVKVKRTG-------------SGRGELETVSSSGTRGMLELPP--------------------EACWEPPFLRRWPEAWSISPLSAPVETCPSSAAKSEDFFSAKPADGVSTGTDGAGGXXXXXGAGDETAANGIT----------CGGGGATPRRGRGHRVIITGRHFAHPAAWGADDMNNPAFGHPPSQAPSQHE-------IDGSSSPQAEACVVAVKVTDENVEKAAVPNPAASGDLR---VREVVVRFD-DVEVPGRVISDTVVEAFAPPRARPGFVDVVVRVKGER--PGGDLSSDA-----PAAGDRGSKRWPRYSVLFRY 334
            LA HVE++YA +H LAFDTFLPAL    A   AAA P+++ A     ++          +R G             + RG     ++ G   M+                        +  WE PF RRWPE W++SP    V T    A      F  K   G +    G+G XXXXX                      C  G ++    +GHRV+ITGR+FAHP A  AD   +   G                  + G +S + E      K  ++  E     + A  G+ R    R V+VRF  DV VPG+V+SDT+VEAFAP R+  GFVDV V V  E    GGDL+SD+      AAG  G +   R++ + RY
Sbjct: 1265 LAHHVESDYAASHALAFDTFLPALAAEQAF--AAATPAMKEASSVPPETVGTAPHPAAAQRQGMATEACLAPGAGTAARGRTAIAATKGQGAMVGATTATTAAEESVVASLGGGKSGGDGRWEVPFFRRWPEVWAVSPTF--VHTTAVEAVTVHPLFDRKGPAGAAVSGKGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRDGSSS----KGHRVLITGRNFAHPVA--ADVAASAVLGSEGGXXXXXXXXXXXXDALSGEASGRGELEQAGGKTGEK--EDHLANDAAGGGETRRSKTRRVLVRFGRDVAVPGKVLSDTLVEAFAPARSEIGFVDVAVVVVAESGAAGGDLASDSVIATTAAAGQHGWRFGRRHAPMLRY 1635          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51536.12420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG45_9PHAE3.020e-3232.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH97_ECTSI6.620e-2132.11Similar to chromosome fragility associated gene 1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51536contigH-elongata_contig51536:173..4032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51536.12420.1mRNA_H-elongata_contig51536.12420.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51536 173..4032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51536.12420.1 ID=prot_H-elongata_contig51536.12420.1|Name=mRNA_H-elongata_contig51536.12420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=730bp
SDERSSLGSWRRLASHVEAEYAVAHYLAFDTFLPALTESLAKVAAAAAPS
LRRAPFAEEDSSAKYVQRVKVKRTGSGRGELETVSSSGTRGMLELPPEAC
WEPPFLRRWPEAWSISPLSAPVETCPSSAAKSEDFFSAKPADGVSTGTDG
AGGAGGVSGAGDETAANGITCGGGGATPRRGRGHRVIITGRHFAHPAAWG
ADDMNNPAFGHPPSQAPSQHEIDGSSSPQAEACVVAVKVTDENVEKAAVP
NPAASGDLRVREVVVRFDDVEVPGRVISDTVVEAFAPPRARPGFVDVVVR
VKGERPGGDLSSDAPAAGDRGSKRWPRYSVLFRYCAPPPLFPPIVGVKRG
MNGGSITMVVGKDRRNASSKILQDNVIEGGIKNNLKSCSWTSSGENASEA
TTPSLVVNGRYGPILLDDGEQDDIFQDDEESAKQLCCQLTDDRATWDEDD
DKPVVPVTSMSSATKKRRLVISDDEDEEGESQDVHVVTMPTEDEVRSARG
GLGALAKAADNGDGDCPHFEENKANSTSFEAVNFVDPYCTAGVGESCSQS
TIAGPVKQVPLEDPNSLRGERKNFEELSTKACFTIGVGESSVNSGIAGSE
GATLHGERKNSKRGGRNCEKFSTSVDGRMSAEDEFESNAAEQVRSSLLCQ
PVPYELPTPAEVDWQRGLGALLEATSVLADTFSAADVIGGVSLGMGLVGA
GPPAADGGDHFVTVAGPPWSERDPRVSQG*
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