prot_H-elongata_contig51535.12419.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51535.12419.1
Unique Nameprot_H-elongata_contig51535.12419.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: D7FHL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL8_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 4.140e-73
Identity = 109/133 (81.95%), Postives = 123/133 (92.48%), Query Frame = 0
Query:    3 TACEKRVFVCTNRWCIEKGSSATLGSFVGLAPQGEVSVQGVNCLGRCNKGPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV 135
            T C+KRV++CTNRWC+EKGS+ATLGSFVGLAP+GEV VQGVNCLGRCNKGPN+RVR+  G WLEFNRI++VERVYKIL+DYLGA VSK+AALCLKYNFLAN AL+RNEV +AIDYYDKAI TGY DQQGVLLV
Sbjct:  187 TECQKRVYICTNRWCMEKGSAATLGSFVGLAPEGEVLVQGVNCLGRCNKGPNVRVRQETGNWLEFNRIENVERVYKILRDYLGADVSKEAALCLKYNFLANAALNRNEVTLAIDYYDKAIDTGYADQQGVLLV 319          
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: A0A835YYQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ6_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.730e-53
Identity = 94/145 (64.83%), Postives = 106/145 (73.10%), Query Frame = 0
Query:    7 KRVFVCTNRWCIEKGSSATLGSFVGLAPQGEVSVQGVNCLGRCNK----------------GPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV 135
            KRVFVCTNRWC E+GS ATL SFVGLAP+ EV VQGVNCLGRCN                 GPNLRV + DG WLEFNRIDSVERVYKIL+D+L   VS+ AA CLKYNF  N  LD+NEV  AI+ Y+KAI+ G+ DQ+GVLLV
Sbjct:   21 KRVFVCTNRWCKERGSGATLSSFVGLAPEDEVLVQGVNCLGRCNXXXXXXXXXXXXXXXXXGPNLRVLQEDGTWLEFNRIDSVERVYKILRDFLSVGVSRTAAECLKYNFQGNSHLDKNEVTEAIECYNKAISMGWADQEGVLLV 165          
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: A0A7R9U417_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U417_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.520e-46
Identity = 76/128 (59.38%), Postives = 94/128 (73.44%), Query Frame = 0
Query:    8 RVFVCTNRWCIEKGSSATLGSFVGLAPQGEVSVQGVNCLGRCNKGPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV 135
            RV VCTNRWC EKGS ATL SF+GL P   V V GV CLG+CNKGPN+++   +G W E NR+DSV++VY+IL D+L  +VS  AA CL++NF  N  LDRNEV  AI  Y+KAI  G+ DQ+GV+LV
Sbjct:   41 RVNVCTNRWCKEKGSGATLASFIGLIPDDNVLVSGVGCLGKCNKGPNIQIMHRNGTWYELNRVDSVDKVYRILTDHLQCRVSPAAAECLQHNFEGNAHLDRNEVTQAIASYNKAIDAGFKDQEGVILV 168          
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: W7U8R6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8R6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.870e-39
Identity = 67/135 (49.63%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    2 DTACEKRVFVCTNRWCIEKGSSATLGSFVGLAPQG-EVSVQGVNCLGRCNKGPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV 135
            D    ++VF+CT+RWC+++G+ AT+GSF+GL P G +V VQGV+CLGRCN+GPNLR+ +++G + E + +DSV++VY +    LG ++++ +A CLK NF  N  LD+NEV  AI+ YDKAI   +  Q+GVL V
Sbjct:  189 DPVTVQQVFICTSRWCMQRGAGATMGSFIGLTPYGSKVRVQGVDCLGRCNRGPNLRLLRSNGTFEELSYVDSVDKVYDVFTSQLGIRINQSSADCLKLNFQGNAHLDKNEVDRAIECYDKAIPLSHRGQEGVLRV 323          
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: A0A4D9DHN8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHN8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.960e-32
Identity = 59/119 (49.58%), Postives = 87/119 (73.11%), Query Frame = 0
Query:   18 IEKGSSATLGSFVGLAPQG-EVSVQGVNCLGRCNKGPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV 135
            +++G+ AT+GSF+GL P G +V VQGV+CLGRCN+GPNLR+ +++G + E + +DSV++VY +    LG ++++ +A CLK NF  N  LD+NEV  AI+ YDKAI   +  Q+GVL V
Sbjct:    1 MQRGAGATMGSFIGLTPYGSKVRVQGVDCLGRCNRGPNLRLLRSNGTFEELSYVDSVDKVYDVFTSQLGIRINQSSADCLKLNFQGNAHLDKNEVDRAIECYDKAIPLSHRGQEGVLRV 119          
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: A0A7S3XUL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUL9_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 9.100e-20
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 0
Query:   36 GEVSVQGVNCLGRCNKGPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGY-LDQQGVL 133
            G V+V GV+CLGRC +GPN+R +     WL+F+ +DSV++  +IL + +G  VS+K A CL  N   N  L  N+V  A+++YD+A+A G   DQ+GV+
Sbjct:    5 GAVNVDGVSCLGRCKRGPNVRCQLGRDAWLDFSGVDSVDQARQILVETMGVPVSQKVATCLDMNLKGNYYLANNKVGKALEHYDRALAAGRGTDQEGVV 103          
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Match: A0A7S1Z4G4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4G4_TRICV)

HSP 1 Score: 69.3 bits (168), Expect = 1.320e-11
Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   68 NRIDSVERVYKILKDYLG-AQVSKKAALCLKYNFLANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV 135
            N +DSV++VY+IL  ++G A +S  A  CLK+N+  N  L++ ++A AI  YDKAI TGY++Q+GV+L+
Sbjct:    2 NNVDSVDKVYRILTKHMGIAGISSVACECLKWNYRGNAHLEKGDIADAIAAYDKAIDTGYVEQEGVVLL 70          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51535.12419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FHL8_ECTSI4.140e-7381.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YYQ6_9STRA1.730e-5364.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U417_9STRA7.520e-4659.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7U8R6_9STRA1.870e-3949.63Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DHN8_9STRA4.960e-3249.58Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3XUL9_HETAK9.100e-2044.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1Z4G4_TRICV1.320e-1147.83Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 4..97
e-value: 2.2E-9
score: 39.4
NoneNo IPR availablePANTHERPTHR47682FAMILY NOT NAMEDcoord: 7..122
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 7..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51535contigH-elongata_contig51535:1830..3717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51535.12419.1mRNA_H-elongata_contig51535.12419.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51535 1809..3717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51535.12419.1 ID=prot_H-elongata_contig51535.12419.1|Name=mRNA_H-elongata_contig51535.12419.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
MDTACEKRVFVCTNRWCIEKGSSATLGSFVGLAPQGEVSVQGVNCLGRCN
KGPNLRVRKADGKWLEFNRIDSVERVYKILKDYLGAQVSKKAALCLKYNF
LANGALDRNEVAMAIDYYDKAIATGYLDQQGVLLV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf