prot_H-elongata_contig51517.12415.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51517.12415.1
Unique Nameprot_H-elongata_contig51517.12415.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length242
Homology
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: D8LTW9_ECTSI (Bardet-Bield syndrome 8, Tetratricopeptide repeat domain 8 isoform B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW9_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 2.450e-89
Identity = 141/185 (76.22%), Postives = 161/185 (87.03%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKA 185
            +R + STGRPLTGFQR     RPVSGQA DL T + G+RPA+SRPLTSMGRE+RLGTA MA  SA  G+ +G  FI+SS+LDLRRYARRP+LAMAL DYL++VERNPR+ALDL AE TTLKEF +WWWKARLGKCYYKLGMLREAERQLKSSL+DQDMV T+L+LVKVYTRLDLPNTALD+L+KA
Sbjct:   39 MRPMTSTGRPLTGFQRPGITVRPVSGQAMDLTTAMTGSRPASSRPLTSMGREVRLGTASMAL-SAGSGE-AGGLFIDSSRLDLRRYARRPSLAMALADYLVFVERNPRKALDLAAEATTLKEFKDWWWKARLGKCYYKLGMLREAERQLKSSLMDQDMVVTYLDLVKVYTRLDLPNTALDLLLKA 221          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A7S1CCY2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCY2_9STRA)

HSP 1 Score: 248 bits (633), Expect = 3.680e-76
Identity = 129/238 (54.20%), Postives = 164/238 (68.91%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT----VLSLDASNVEATASLAANHFY 234
            +R V   GRPLTGF R  T TRP +G  + +     G RP TSRP+T++GR++RLGTA M A +       G PF+   +LDLR+YARR  +A AL DYLLYVE NPR+AL+L AE T   EF +WWWKARLGKCYY+LG+ R+AERQ KS+L D DM+ ++LEL KVY +LD PNTA+D  +K +E HP E  +L+  AR +D+LND +       VL  DASNVEA A LA++HFY
Sbjct:  113 VRPVTGAGRPLTGFARPGTSTRPSTGSVS-VGDAFKGGRPGTSRPVTALGRQVRLGTASMTATA-------GGPFVNVDRLDLRKYARRSIIAKALCDYLLYVEHNPRKALELAAEATVRAEFKDWWWKARLGKCYYQLGLFRDAERQFKSALRDTDMIVSYLELCKVYVKLDQPNTAIDNYLKGAELHPGETSLLVGVARIYDMLNDAKGTDYYKKVLKYDASNVEAVACLASHHFY 342          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A7S3UNH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNH3_HETAK)

HSP 1 Score: 243 bits (619), Expect = 1.150e-75
Identity = 126/207 (60.87%), Postives = 153/207 (73.91%), Query Frame = 0
Query:   33 TTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT-----VLSLDASNVEATASLAANHFY 234
            T + G RP TSRP+TS+GRE+RLGTA MA        D G PFI   +LDL +YA+RP L+M L +YL+Y +RN R+ L+L AE T   E+ +WWWKARLGKCYYKLG+ R+AERQLKSSL DQDMV T LELVKVY +LDLPNTALD++ +A+  HP E R+LL  AR HD+L+D E A      VL LD+SNVEA +SLAANHFY
Sbjct:    5 TAMKGNRPGTSRPVTSLGRELRLGTASMAT-------DIGGPFINVDRLDLAKYAKRPTLSMVLCEYLVYHDRNARKGLELAAEATVHHEYKDWWWKARLGKCYYKLGLYRDAERQLKSSLKDQDMVVTVLELVKVYVKLDLPNTALDLMTEAAARHPGESRLLLGIARIHDMLSDHEAAVGYYKKVLQLDSSNVEAISSLAANHFY 204          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A836CMW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW3_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.770e-74
Identity = 125/214 (58.41%), Postives = 159/214 (74.30%), Query Frame = 0
Query:   26 GQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENA-----TVLSLDASNVEATASLAANHFY 234
            GQ  D+ T + G RP TSRP T++GRE+RLGTA       ++    GA F+++ +LDL+R A+R ALA AL +YLLYVERNPR+AL+L AE T   +F +WWWKARLG+CY+KLGM R+AE+QLKSSL DQDM+ THLELVKVY RLDLPNTALD+L +A+  H  + R+ LA+AR H+ L+  E A     T L+LD +NVEATASLA N+FY
Sbjct:  112 GQQMDVSTAMRGPRPGTSRPATALGREVRLGTA-------SLDSGGGAAFVDTDRLDLKRMAKRGALAAALVEYLLYVERNPRKALELAAEATAAADFKDWWWKARLGRCYHKLGMYRDAEKQLKSSLKDQDMLLTHLELVKVYQRLDLPNTALDLLARAAVRHDGDARLALASARLHEALSAAEAAGAAYKTALALDPTNVEATASLAVNYFY 318          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: H3G905_PHYRM (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G905_PHYRM)

HSP 1 Score: 242 bits (618), Expect = 5.100e-74
Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT-----VLSLDASNVEATASLAANHFY 234
            LR + +TGRPL+GF R  T +RP +G  + +   L G RP TSRP T++GR++RLGTA M A+      DSG  FI+ ++LD +RYA+RPA+A AL DYLLY E NPRRAL+L AE T   ++ +WWWKARLGKCYY+LG+ R+AE+Q +SSL +QDMV T LEL KVY RLD PNTALD   K     P + ++L++ AR HD+LND E +      VL LDASNVEA A LA+N+FY
Sbjct:  103 LRPMTATGRPLSGFARPGTSSRPGTGSMS-VDRALQGNRPGTSRPATTLGRQVRLGTASMQAS------DSGV-FIDVNRLDFKRYAKRPAIAKALVDYLLYCEHNPRRALELAAEATVAADYKDWWWKARLGKCYYQLGLFRDAEKQFESSLRNQDMVITFLELGKVYLRLDQPNTALDRYEKGKAKFPGDTQLLVSIARVHDMLNDVEKSVSVYKEVLQLDASNVEAIACLASNYFY 333          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A5D6YDS4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDS4_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.350e-69
Identity = 127/239 (53.14%), Postives = 170/239 (71.13%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT-----VLSLDASNVEATASLAANHFY 234
            +R + STGRPL+GF R  T +RP +G  + L   L G+RP TSRP T++GR++RLGTA M +  A++       FI+ ++LDL+RYA RPA+A AL DYLLY E NPR+AL+L AE T   ++ +WWWKARLGKCYY+LG+ R+AE+Q +SSL  Q+MV T LEL KVY RLD PNTAL    +A  + P + ++L+A+AR HD+LND + +      VL+LDAS+VEA A LA+N FY
Sbjct:  113 VRPMTSTGRPLSGFARPGTSSRPGTGSMS-LDRALQGSRPGTSRPPTTLGRQVRLGTASMQSIDASV-------FIDVNRLDLKRYAARPAIAKALVDYLLYHEHNPRKALELAAEATVAADYKDWWWKARLGKCYYQLGLFRDAEKQFESSLRCQEMVLTVLELGKVYLRLDQPNTALARYERARGAFPGDTQLLVASARVHDMLNDVDKSVALYKDVLALDASSVEAVACLASNLFY 343          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: K3X8B7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8B7_GLOUD)

HSP 1 Score: 233 bits (595), Expect = 6.260e-69
Identity = 127/239 (53.14%), Postives = 167/239 (69.87%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT-----VLSLDASNVEATASLAANHFY 234
            LR + STGRPL+GF R  T +RP +G  + +   L G+RP TSRP T++GR++RLGTA M +     G DSG  FI+ ++LD +RYA RPA+A  L DYLLY E NPR+AL+L AE T   ++ +WWWK RLGKCYY+LG+ R+AE+Q +SSL +Q+MV T LEL KVY RLD PNTALD   +A +  P +  +LL +AR HD+LN+ + A      VL LD+SN+EA A LA+N FY
Sbjct:  287 LRPMTSTGRPLSGFARPGTSSRPGTGSMS-IDRALQGSRPGTSRPPTTLGRQVRLGTASMQS-----GADSGM-FIDVNRLDFKRYAARPAIAKVLVDYLLYHEHNPRKALELAAEATVAVDYKDWWWKTRLGKCYYQLGLFRDAEKQFESSLRNQEMVITVLELCKVYLRLDQPNTALDRYDRARDKFPGDIHLLLGSARVHDMLNNVDRAVEIYKDVLQLDSSNIEAIACLASNFFY 518          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A7S3G6M4_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G6M4_9EUKA)

HSP 1 Score: 220 bits (560), Expect = 2.500e-65
Identity = 121/239 (50.63%), Postives = 155/239 (64.85%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT-----VLSLDASNVEATASLAANHFY 234
            +R ++  GRP +GF R  T +RP   Q   L   L G+RP TSRP+TS GR +RLGTA M +       + G PFI   KLDLR+YA R  LA  L DY++Y E NP++AL+L A  TT   + +WWWKARLGKCYY+LG+ REAE+Q  S+L   DMV T LEL KVY +LD PNTALD   +A+E HP + ++LL  +R +D LND   +      VL  DAS++EA A LAA+HFY
Sbjct:  111 VRPMSGAGRPTSGFVRPGTSSRP---QTNSLEGALAGSRPGTSRPVTSSGRFVRLGTASMLS-------EPGGPFINVEKLDLRKYAARTPLAKVLCDYIIYHEHNPKKALELCAHATTSSNYQDWWWKARLGKCYYQLGLYREAEKQFLSALKTADMVITTLELCKVYIKLDQPNTALDNYTRAAERHPGDTQLLLGISRIYDQLNDVTRSIQFYKRVLYFDASSIEAVACLAAHHFY 339          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A812UTE9_9DINO (Ttc8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812UTE9_9DINO)

HSP 1 Score: 220 bits (560), Expect = 8.860e-65
Identity = 123/240 (51.25%), Postives = 158/240 (65.83%), Query Frame = 0
Query:    1 LRVVNSTGRPLTGFQRSRTVTRPVSGQAA-DLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLNDGENAT-----VLSLDASNVEATASLAANHFY 234
            +R V+++GRPLTGF R  T  RP S  A  D+ T + G R     PLTSMGR IRLGTA M        +  G  F+    LDL++YA+RPA+A AL DY+LY  RNPR+AL+L +E T   +F +WWWKARLGK YY+LG+LR+AE+Q KS+L D++M++THLEL KVY RLD PN+ALD   +A+E    E  IL+  ART+D+LN           VL  DA N EA A LA++HFY
Sbjct:  167 VRPVSASGRPLTGFARPGT-NRPTSSSAGRDVTTAMQGNRXXXXXPLTSMGRLIRLGTASMV-------NQDGGEFVRLESLDLQKYAQRPAIAKALCDYMLYYARNPRKALELASEATQAVDFKDWWWKARLGKAYYQLGLLRDAEKQFKSALKDEEMITTHLELCKVYLRLDQPNSALDQYGRAAEKFVGETHILIGLARTYDMLNALLRGVSFYKKVLQYDAVNSEAIACLASHHFY 398          
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Match: A0A067BK52_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BK52_SAPPC)

HSP 1 Score: 215 bits (547), Expect = 1.410e-63
Identity = 111/207 (53.62%), Postives = 148/207 (71.50%), Query Frame = 0
Query:    2 RVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMGREIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYLLYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLKSSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATARTHDLLND 208
            R ++++GRPL+GF R  T +RP +G + D    L GARP TSRP TS+GR++RLGTA M +     GD  G  FI   +LD++RYA RP +A AL DYLLY + NP++AL+L AE T   ++ +WWWKARLGKCYY+LG+LR+AE+Q +SSL  Q+MV T+LEL KVY +LD PNTAL+   +ASE  P +  +L+  AR HD+LND
Sbjct:   91 RPMSASGRPLSGFARPGTGSRPGTGLSLDQA--LQGARPGTSRPPTSLGRQVRLGTASMQS----QGD--GGAFISPDRLDMKRYAARPPIAKALVDYLLYHDHNPKKALELAAEATVAADYKDWWWKARLGKCYYQLGLLRDAEKQFESSLRSQEMVVTYLELCKVYLKLDQPNTALEYYRRASEKFPGDVHVLVGMARIHDMLND 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51517.12415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW9_ECTSI2.450e-8976.22Bardet-Bield syndrome 8, Tetratricopeptide repeat ... [more]
A0A7S1CCY2_9STRA3.680e-7654.20Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3UNH3_HETAK1.150e-7560.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMW3_9STRA1.770e-7458.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H3G905_PHYRM5.100e-7455.23Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
A0A5D6YDS4_9STRA1.350e-6953.14Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X8B7_GLOUD6.260e-6953.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S3G6M4_9EUKA2.500e-6550.63Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A812UTE9_9DINO8.860e-6551.25Ttc8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A067BK52_SAPPC1.410e-6353.62Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 84..239
e-value: 2.9E-8
score: 35.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 124..234
IPR028796Tetratricopeptide repeat protein 8PANTHERPTHR44177FAMILY NOT NAMEDcoord: 2..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51517contigH-elongata_contig51517:288..3717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51517.12415.1mRNA_H-elongata_contig51517.12415.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51517 288..3717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51517.12415.1 ID=prot_H-elongata_contig51517.12415.1|Name=mRNA_H-elongata_contig51517.12415.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
LRVVNSTGRPLTGFQRSRTVTRPVSGQAADLMTTLGGARPATSRPLTSMG
REIRLGTAGMAAASAAMGDDSGAPFIESSKLDLRRYARRPALAMALTDYL
LYVERNPRRALDLTAEVTTLKEFNNWWWKARLGKCYYKLGMLREAERQLK
SSLVDQDMVSTHLELVKVYTRLDLPNTALDVLMKASESHPRECRILLATA
RTHDLLNDGENATVLSLDASNVEATASLAANHFYGGTYTHT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR028796BBS8