prot_H-elongata_contig51360.12395.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51360.12395.1
Unique Nameprot_H-elongata_contig51360.12395.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A835Z4N5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.010e-33
Identity = 77/173 (44.51%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    1 MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIK 173
            +GE D ALEAV  GLK +P N DL R  R +K K +A  S A++GG G+         G +D+QT +E +ELS Q   T+RELAEV A LQ  +R+ +R  LT  E+ G+    ++Y+SVGK+F+L +K+EI  +LD++  E+ K+E QL+ K+ YLE RL S++ NL+E+++
Sbjct:   92 LGEVDKALEAVTEGLKKEPSNADLTRQLRVVKGKKAAAASKARQGGGGAP--------GGLDKQTFEEIRELSDQSEVTQRELAEVSANLQGCLRDQRRAQLTKTEVAGLGGDARLYRSVGKVFMLNSKKEIDTLLDAQATERAKSEEQLKGKKAYLENRLNSQKTNLNELLR 256          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S2SWL7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWL7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.740e-21
Identity = 62/176 (35.23%), Postives = 103/176 (58.52%), Query Frame = 0
Query:    1 MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQ 176
            +GE D+A   ++ GLK DP   DL RL R +KAK +A  SA +         G Q     +     +E +E+S Q   T R+L EV A+L+   +E +R  +   E++ + EAT +YQS+GKMF+L+ +EEI + L    + Q K  A L++++ YL++RL S++ N+ ++ +++Q
Sbjct:   98 LGELDAAASTIREGLKKDPNMPDLSRLLRKIKAKKAAIASARK---------GKQT---NVSESMRKEIEEMSEQYKQTGRDLQEVRARLEATAKEQRRIAVMSNEVEHLPEATPLYQSIGKMFMLRPREEIKSTLTENAEGQEKRLADLKSREQYLQRRLHSQEENMKDLFQSLQ 261          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A6V2AJX7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AJX7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 4.820e-14
Identity = 61/183 (33.33%), Postives = 96/183 (52.46%), Query Frame = 0
Query:    1 MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGG-------TIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDG--VKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKN 174
            +G  D+A+  ++ G+  +P N  L +L R +KAK +    A            +  G G       T DR+ L    +L  Q  T+ RE   V+A +    RE+K   LT  EL+   V E  KMY+ +GKMF+L T+ +I N LD+  +E++K E  L+ K  YLE+++ S+Q N+ E+ K+
Sbjct:   87 LGNWDAAIATIKQGMNVEPDNSQLSKLLRQVKAKRANAKRAXXXXXXXXXXXSNTSGVGPTTSFASTTDRELL----DLQEQFITSNREYNTVKANIHKSQREVKMNELTKAELETIPVTEDAKMYRGIGKMFMLSTRGDIMNHLDTCVEEESKREESLKNKAEYLERKMKSQQLNIQELTKS 265          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S0BYP4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYP4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.000e-13
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 0
Query:    1 MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKE--ATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEI 171
            + + D A   ++ GL  DP N  L +  R +  K      A  K    + +  + R  G +D    QE  +L  Q  +T RE   V A +    RE +   LT  EL+ + +  ++KMY+S+GKMFLL  +E I + L +  K++ K E  L+ K  YLE+R+ S++ N+ E+
Sbjct:   94 LNDLDGAHSTIKQGLNVDPSNNQLSKQLRIVNGKKKEIAKAIAKKAKSAGNNAAPRSVGNVDSSVSQELMDLQEQYISTNREYNTVTAHITKAQREQRTNELTKSELEKLPQESSSKMYRSIGKMFLLSGREAIMDHLGTAMKDEAKKEVDLKQKLDYLERRIKSQRQNIQEL 266          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S2CYH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYH7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.810e-12
Identity = 52/179 (29.05%), Postives = 91/179 (50.84%), Query Frame = 0
Query:    1 MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQAQA 179
            +G  D A+  ++ GLK DP + DL RL + +K                                    +Q+       T+REL EV+ +L +  RE K   LT  +++ V E  KMY+SVGKMF+L  K ++  IL  + + + KT+ +L +++ YL++R+TS++ N+ ++++N   +A
Sbjct:   89 LGSPDEAVSTIRDGLKQDPGHKDLARLLQKMKXXXXXXXXXXX--------XXXXXXXXXXXXXXXXSYQQ-------TERELQEVQGRLMSSQREQKMISLTSKQIENVPETNKMYRSVGKMFMLTPKADMEGILQEQGQTEKKTQTELMSRRKYLQRRITSQEENIKDLMQNAMERA 252          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: UPI00193AC0C8 (prefoldin subunit 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193AC0C8)

HSP 1 Score: 68.2 bits (165), Expect = 1.240e-11
Identity = 39/112 (34.82%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   61 IDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEII 172
            +D +  Q F +L  ++  T+ ++   +AQ+  + RE KR  LT  E+ G+   T+++QSVG+MFLL+T++EI   L S ++  +    +L+AK+ YLEK +   + NL E++
Sbjct:    1 MDMELKQAFADLQRKMVETQSQMKIADAQIMQLGREKKRSELTASEISGLPSETRLFQSVGRMFLLRTRDEIDQNLKSSQENSDTKVKELEAKKKYLEKTVKESEENLREMV 112          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A8B6GLG4_MYTGA (Prefoldin subunit 1 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GLG4_MYTGA)

HSP 1 Score: 67.8 bits (164), Expect = 2.210e-11
Identity = 40/121 (33.06%), Postives = 70/121 (57.85%), Query Frame = 0
Query:   56 RGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQ 176
            + G  +D +  + FQEL +++  +K ++   +AQ++ + R ++   L   EL  + E T++Y+ VG+MF+LQ  +EI N LDSK K   +    LQ  + YLE+ +   + NL E+I + Q
Sbjct:    4 KAGMPVDMELKKAFQELQIKMINSKNQIKISDAQIEALKRTIQHSKLVYHELSSLAEETRLYEGVGRMFILQPPKEIKNQLDSKMKASEEKIESLQKNKTYLERNIKESEDNLREMITSRQ 124          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A7S2LG90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LG90_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 6.270e-11
Identity = 55/172 (31.98%), Postives = 92/172 (53.49%), Query Frame = 0
Query:    5 DSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSKSVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELD----GVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEII 172
            D AL  V+ GL+ D +N  LL+  R +  +      AA++  A S +  +   G   +++   E +EL  Q   T REL  + + +Q   RE K   +T GE++    G  +   +Y+ VGKMF+L ++ E+ + L     +  K E+ L  K++YL+KR++S+Q NL E+I
Sbjct:   98 DGALGTVRQGLQLDGENSQLLKQLRIITQQKKKMDVAAKQATAMSDARSANIAGS--NKEESDEIRELQEQYVATNRELQIINSNIQKSQREQKLADITLGEINKMTSGDDDGRNLYRGVGKMFMLSSRPEVLDHLKKSTADAKKDESDLIQKRVYLQKRISSQQQNLQELI 267          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A1L8GXE1_XENLA (prefoldin subunit 1 n=3 Tax=Xenopus TaxID=8353 RepID=A0A1L8GXE1_XENLA)

HSP 1 Score: 65.9 bits (159), Expect = 1.070e-10
Identity = 39/118 (33.05%), Postives = 74/118 (62.71%), Query Frame = 0
Query:   61 IDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQAQ 178
            +D +  + F EL  +V  T++++   + Q++ + R  K  +LTG E+  + ++T MY+ VG+MF+LQTK+ I N L +K+K  ++  A+L+ K+ YLE+ +   + N+ E++   +AQ
Sbjct:    5 VDLELKKAFTELQAKVLDTQQKVKLADLQIEQLNRTKKHAYLTGAEIKTLSDSTPMYEGVGRMFVLQTKDTIHNQLLNKQKVADEKIAELEQKKTYLERSVKDAEDNIREMLMARRAQ 122          
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Match: A0A3Q1BQP7_AMPOC (Prefoldin subunit 1 n=4 Tax=Amphiprion TaxID=80969 RepID=A0A3Q1BQP7_AMPOC)

HSP 1 Score: 65.5 bits (158), Expect = 3.540e-10
Identity = 38/118 (32.20%), Postives = 73/118 (61.86%), Query Frame = 0
Query:   61 IDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRGHLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQLQAKQLYLEKRLTSEQGNLDEIIKNIQAQ 178
            +D +  + F EL V++  T++++     Q+  + R  K   LT  E+  + + T++Y+ VG+MF+LQ+KEEI+N L  K+K  ++   +L+ K+LYLE+ +   + N+ E++ + +AQ
Sbjct:   45 VDLELKKAFTELQVKMVDTQQKVKLANLQIDQLTRVQKHAKLTHAEITTLPDNTRLYEGVGRMFILQSKEEISNQLTDKQKTADEKIRELEQKKLYLERSVKEAEDNIREMLLSRRAQ 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51360.12395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4N5_9STRA2.010e-3344.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SWL7_9STRA2.740e-2135.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2AJX7_9STRA4.820e-1433.33Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0BYP4_9STRA1.000e-1331.79Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2CYH7_9STRA2.810e-1229.05Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI00193AC0C81.240e-1134.82prefoldin subunit 1-like n=1 Tax=Styela clava TaxI... [more]
A0A8B6GLG4_MYTGA2.210e-1133.06Prefoldin subunit 1 n=1 Tax=Mytilus galloprovincia... [more]
A0A7S2LG90_9STRA6.270e-1131.98Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1L8GXE1_XENLA1.070e-1033.05prefoldin subunit 1 n=3 Tax=Xenopus TaxID=8353 Rep... [more]
A0A3Q1BQP7_AMPOC3.540e-1032.20Prefoldin subunit 1 n=4 Tax=Amphiprion TaxID=80969... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..149
NoneNo IPR availableCOILSCoilCoilcoord: 69..96
NoneNo IPR availablePANTHERPTHR20903:SF0PREFOLDIN SUBUNIT 1coord: 62..178
NoneNo IPR availablePANTHERPTHR20903PREFOLDIN SUBUNIT 1-RELATEDcoord: 62..178
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 68..172
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 70..172
e-value: 7.9E-12
score: 45.1
IPR009053PrefoldinGENE3D1.10.287.370coord: 63..177
e-value: 1.1E-10
score: 43.2
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..21
score: 9.025

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51360contigH-elongata_contig51360:463..2343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51360.12395.1mRNA_H-elongata_contig51360.12395.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51360 440..3703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51360.12395.1 ID=prot_H-elongata_contig51360.12395.1|Name=mRNA_H-elongata_contig51360.12395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MGETDSALEAVQTGLKTDPKNGDLLRLRRSLKAKHSATVSAAQKGGAGSK
SVGSQRGGGTIDRQTLQEFQELSVQVGTTKRELAEVEAQLQTVVRELKRG
HLTGGELDGVKEATKMYQSVGKMFLLQTKEEITNILDSKRKEQNKTEAQL
QAKQLYLEKRLTSEQGNLDEIIKNIQAQA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR009053Prefoldin
IPR013026TPR-contain_dom