prot_H-elongata_contig51318.12389.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51318.12389.1
Unique Nameprot_H-elongata_contig51318.12389.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: D8LGY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY3_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 3.300e-76
Identity = 121/157 (77.07%), Postives = 140/157 (89.17%), Query Frame = 0
Query:    1 DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKLPHAVK 157
            DP+SAIKFLVPN+ AGSLIGKKGATIKDIQ+K SCMV IATSGMY+PGTMERAVLVAG ++GV++AC LILHT+H PD+N SGCAKL+S E A  I+V+QR+LIPLTAGGLVIGR+GANIAALL AS AK+TLGQKA++K +ERLVTVQGKL  A K
Sbjct:   82 DPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATK 238          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A6H5KLG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG6_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 6.520e-73
Identity = 122/157 (77.71%), Postives = 141/157 (89.81%), Query Frame = 0
Query:    1 DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKLPHAVK 157
            DP+SAIKFLVPN+ AGSLIGKKGATIKDIQ+K SCMVRIATSGMY+PGTMERAVLVAG ++GV++AC LILHT+H PD+N SGCAKL+S E A  I+V+QR+LIPLTAGGLVIGR+GANIAALL AS AK+TLGQKA++K +ERLVTVQGKL  A K
Sbjct:   86 DPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSEEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATK 242          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.950e-35
Identity = 73/153 (47.71%), Postives = 105/153 (68.63%), Query Frame = 0
Query:    2 PESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAP--DHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKL 152
            P  A+K LV N +AGSLIGK G TI+++Q+++  +V+++TSGMY PGT +R VLV G+   V+ ACAL+LHT+H    D +    A L        ++V+QR+LIP +AGGLVIGR G+NI  L E+S A+++L QK    ++ER+VT+ G L
Sbjct:   46 PPCALKLLVSNNMAGSLIGKAGQTIQNVQLQSGAVVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVHEQGRDRDCGVPAPLDIGTERDALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSL 198          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.170e-26
Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = 0
Query:    2 PESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIH--APDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKL 152
            P  AIK LV N +AG LIGK GATI+ +Q +T  +V +++S    PG ++R VL++G++  V+ A AL+LHT+H  A D + +  A L       + +++QR+LIP  AGGLVIG +G+ + AL  AS A+++L  K    + ER++T+ G L
Sbjct:  264 PACAIKLLVSNNMAGGLIGKAGATIQSLQAQTGALVNVSSSACL-PGILDRVVLISGDAAPVKMAVALVLHTVHDHARDRDATEPAPLAIAAALNEQEITQRLLIPAAAGGLVIGWRGSGVQALSSASGARVSLSHKRNPASAERVMTIHGAL 415          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A7S1C6X2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6X2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.540e-21
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 0
Query:    5 AIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKA--NERLVTVQGKLPHAV 156
            A+K L+ N   GS+IGK+GA I ++Q  T C ++I+ S  YFPGT ER  L+ G +  V  A  LIL  ++A +   S         + A++ V  +MLIP +A GLVIG+ G N+ A+   S A + L  K ++    NER+V V G    A+
Sbjct:   20 ALKLLLTNEQVGSIIGKRGAVITEMQETTRCRIKISPSHSYFPGTTERPALLTGTTHAVGAALDLILMRLYADERERSADG------MVARLAV--KMLIPESAAGLVIGKGGENVRAITSDSGAAVKLSHKGDVATGVNERVVVVTGSDAQAI 165          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A7S0HL77_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HL77_9CRYP)

HSP 1 Score: 91.7 bits (226), Expect = 5.130e-20
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 0
Query:    5 AIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQK-AEIKA-NERLVTVQGKLPHA 155
            A K LV N  AG++IGK GATI+++Q +T C VRI+ +  +FPGT +R VL+ G +D +      I+  +     N  G    + PE  + +     ML+P    G++IG+ G NI  ++E S AK+ L  K + I   +ER++T  GKLP A
Sbjct:   45 AFKLLVSNKDAGTVIGKSGATIQNVQGRTGCRVRISNNNEFFPGTQDRVVLITGTADAIIMGAKAIVTELF---ENPIGEDHTVDPETKSVVIT---MLVPEKTSGVIIGKGGENIKHMIEESGAKVKLNSKDSRIPGLDERVLTCDGKLPSA 191          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A7S0GD86_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD86_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-18
Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    4 SAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERA-VLVAGNSDGVERACALILH----------TIHAPDHNISGCAKLLSPELAAKIDVSQ--------RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE---IKANERLVTV 148
            SAIK LV N +AGS+IGK G TI DIQ ++ C ++++ +   FPGT +R  +LVA N + V+R   LIL           TI    +NIS    ++  + A    VS         R+L+P +A G++IGR G+NI A+ EAS++++ L QK E   +  +ER+VT+
Sbjct:  234 SAIKILVTNNVAGSIIGKSGKTISDIQHQSQCRIKLSQARDCFPGTNDRVCLLVADNVESVKRGAQLILDKYQSAQSQSVTIIPRGNNISS---VIMDDTATTGYVSSPFSEIFMVRILVPSSACGMIIGRGGSNIKAIAEASKSRIQLTQKEEMASVATSERIVTI 397          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A6J3AZP0_VICPA (RNA-binding protein Nova-2 n=1 Tax=Vicugna pacos TaxID=30538 RepID=A0A6J3AZP0_VICPA)

HSP 1 Score: 86.7 bits (213), Expect = 2.930e-18
Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    3 ESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISG--CAKLLSPELAAKIDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE-IKANERLVTVQG 150
            E  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LV G ++ +    + I   +      ++      +L P+     D ++  ++++P +  GL+IG+ GA + A++E S A + L QK E I   ER+VTV G
Sbjct:   31 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 183          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A5N4DV81_CAMDR (RNA-binding protein Nova-2 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4DV81_CAMDR)

HSP 1 Score: 86.7 bits (213), Expect = 4.200e-18
Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    3 ESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISG--CAKLLSPELAAKIDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE-IKANERLVTVQG 150
            E  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LV G ++ +    + I   +      ++      +L P+     D ++  ++++P +  GL+IG+ GA + A++E S A + L QK E I   ER+VTV G
Sbjct:   32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 184          
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A6I8NAB4_ORNAN (NOVA alternative splicing regulator 2 n=3 Tax=Monotremata TaxID=9255 RepID=A0A6I8NAB4_ORNAN)

HSP 1 Score: 89.7 bits (221), Expect = 5.910e-18
Identity = 54/155 (34.84%), Postives = 87/155 (56.13%), Query Frame = 0
Query:    1 DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNI--SGCAKLLSPELAAKIDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE-IKANERLVTVQG 150
            D E  +K LVP+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LV G ++ +  A + I   +      +  S    +L P+     D ++  ++++  +  GLVIG+ GA + A++E S A + L QK E +   ER+VTV G
Sbjct:   69 DGEFFLKVLVPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAAHSFIAEKVREIPQAVAKSEAVNILQPQTTMNPDRAKQAKLIVSNSTAGLVIGKGGATVKAIMEQSGAWVQLSQKPEGVNLQERVVTVSG 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGY3_ECTSI3.300e-7677.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLG6_9PHAE6.520e-7377.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIW2_9STRA2.950e-3547.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEM4_9STRA4.170e-2641.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1C6X2_9STRA5.540e-2138.31Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0HL77_9CRYP5.130e-2037.91Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S0GD86_9STRA1.020e-1838.92Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6J3AZP0_VICPA2.930e-1833.33RNA-binding protein Nova-2 n=1 Tax=Vicugna pacos T... [more]
A0A5N4DV81_CAMDR4.200e-1833.33RNA-binding protein Nova-2 n=1 Tax=Camelus dromeda... [more]
A0A6I8NAB4_ORNAN5.910e-1834.84NOVA alternative splicing regulator 2 n=3 Tax=Mono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 96..153
e-value: 1.4
score: 14.4
coord: 2..75
e-value: 3.9E-9
score: 46.4
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 2..79
e-value: 1.8E-19
score: 71.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 94..157
e-value: 6.0E-10
score: 40.8
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 98..152
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 6..76
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 100..156
e-value: 2.0E-7
score: 30.7
coord: 7..71
e-value: 9.0E-14
score: 51.1
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 4..151
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 97..157
score: 13.167
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 3..70
score: 15.431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51318contigH-elongata_contig51318:215..3382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51318.12389.1mRNA_H-elongata_contig51318.12389.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51318 215..3382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51318.12389.1 ID=prot_H-elongata_contig51318.12389.1|Name=mRNA_H-elongata_contig51318.12389.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTM
ERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQ
RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQG
KLPHAVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1