mRNA_H-elongata_contig51318.12389.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51318.12389.1
Unique NamemRNA_H-elongata_contig51318.12389.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: D8LGY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY3_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 3.300e-76
Identity = 121/157 (77.07%), Postives = 140/157 (89.17%), Query Frame = 1 
Query:    1 DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKLPHAVK 471
            DP+SAIKFLVPN+ AGSLIGKKGATIKDIQ+K SCMV IATSGMY+PGTMERAVLVAG ++GV++AC LILHT+H PD+N SGCAKL+S E A  I+V+QR+LIPLTAGGLVIGR+GANIAALL AS AK+TLGQKA++K +ERLVTVQGKL  A K
Sbjct:   82 DPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATK 238
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A6H5KLG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG6_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 6.520e-73
Identity = 122/157 (77.71%), Postives = 141/157 (89.81%), Query Frame = 1 
Query:    1 DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKLPHAVK 471
            DP+SAIKFLVPN+ AGSLIGKKGATIKDIQ+K SCMVRIATSGMY+PGTMERAVLVAG ++GV++AC LILHT+H PD+N SGCAKL+S E A  I+V+QR+LIPLTAGGLVIGR+GANIAALL AS AK+TLGQKA++K +ERLVTVQGKL  A K
Sbjct:   86 DPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSEEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATK 242
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.950e-35
Identity = 73/153 (47.71%), Postives = 105/153 (68.63%), Query Frame = 1 
Query:    4 PESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAP--DHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKL 456
            P  A+K LV N +AGSLIGK G TI+++Q+++  +V+++TSGMY PGT +R VLV G+   V+ ACAL+LHT+H    D +    A L        ++V+QR+LIP +AGGLVIGR G+NI  L E+S A+++L QK    ++ER+VT+ G L
Sbjct:   46 PPCALKLLVSNNMAGSLIGKAGQTIQNVQLQSGAVVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVHEQGRDRDCGVPAPLDIGTERDALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSL 198
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.170e-26
Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = 1 
Query:    4 PESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIH--APDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQGKL 456
            P  AIK LV N +AG LIGK GATI+ +Q +T  +V +++S    PG ++R VL++G++  V+ A AL+LHT+H  A D + +  A L       + +++QR+LIP  AGGLVIG +G+ + AL  AS A+++L  K    + ER++T+ G L
Sbjct:  264 PACAIKLLVSNNMAGGLIGKAGATIQSLQAQTGALVNVSSSACL-PGILDRVVLISGDAAPVKMAVALVLHTVHDHARDRDATEPAPLAIAAALNEQEITQRLLIPAAAGGLVIGWRGSGVQALSSASGARVSLSHKRNPASAERVMTIHGAL 415
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A7S1C6X2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6X2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.540e-21
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 1 
Query:   13 AIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKA--NERLVTVQGKLPHAV 468
            A+K L+ N   GS+IGK+GA I ++Q  T C ++I+ S  YFPGT ER  L+ G +  V  A  LIL  ++A +   S         + A++ V  +MLIP +A GLVIG+ G N+ A+   S A + L  K ++    NER+V V G    A+
Sbjct:   20 ALKLLLTNEQVGSIIGKRGAVITEMQETTRCRIKISPSHSYFPGTTERPALLTGTTHAVGAALDLILMRLYADERERSADG------MVARLAV--KMLIPESAAGLVIGKGGENVRAITSDSGAAVKLSHKGDVATGVNERVVVVTGSDAQAI 165
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A7S0HL77_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HL77_9CRYP)

HSP 1 Score: 91.7 bits (226), Expect = 5.130e-20
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 1 
Query:   13 AIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQRMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQK-AEIKA-NERLVTVQGKLPHA 465
            A K LV N  AG++IGK GATI+++Q +T C VRI+ +  +FPGT +R VL+ G +D +      I+  +     N  G    + PE  + +     ML+P    G++IG+ G NI  ++E S AK+ L  K + I   +ER++T  GKLP A
Sbjct:   45 AFKLLVSNKDAGTVIGKSGATIQNVQGRTGCRVRISNNNEFFPGTQDRVVLITGTADAIIMGAKAIVTELF---ENPIGEDHTVDPETKSVVIT---MLVPEKTSGVIIGKGGENIKHMIEESGAKVKLNSKDSRIPGLDERVLTCDGKLPSA 191
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A7S0GD86_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD86_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-18
Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = 1 
Query:   10 SAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERA-VLVAGNSDGVERACALILH----------TIHAPDHNISGCAKLLSPELAAKIDVSQ--------RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE---IKANERLVTV 444
            SAIK LV N +AGS+IGK G TI DIQ ++ C ++++ +   FPGT +R  +LVA N + V+R   LIL           TI    +NIS    ++  + A    VS         R+L+P +A G++IGR G+NI A+ EAS++++ L QK E   +  +ER+VT+
Sbjct:  234 SAIKILVTNNVAGSIIGKSGKTISDIQHQSQCRIKLSQARDCFPGTNDRVCLLVADNVESVKRGAQLILDKYQSAQSQSVTIIPRGNNISS---VIMDDTATTGYVSSPFSEIFMVRILVPSSACGMIIGRGGSNIKAIAEASKSRIQLTQKEEMASVATSERIVTI 397
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A6J3AZP0_VICPA (RNA-binding protein Nova-2 n=1 Tax=Vicugna pacos TaxID=30538 RepID=A0A6J3AZP0_VICPA)

HSP 1 Score: 86.7 bits (213), Expect = 2.930e-18
Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 1 
Query:    7 ESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISG--CAKLLSPELAAKIDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE-IKANERLVTVQG 450
            E  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LV G ++ +    + I   +      ++      +L P+     D ++  ++++P +  GL+IG+ GA + A++E S A + L QK E I   ER+VTV G
Sbjct:   31 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 183
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A5N4DV81_CAMDR (RNA-binding protein Nova-2 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4DV81_CAMDR)

HSP 1 Score: 86.7 bits (213), Expect = 4.200e-18
Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 1 
Query:    7 ESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNISG--CAKLLSPELAAKIDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE-IKANERLVTVQG 450
            E  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LV G ++ +    + I   +      ++      +L P+     D ++  ++++P +  GL+IG+ GA + A++E S A + L QK E I   ER+VTV G
Sbjct:   32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 184
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BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Match: A0A6I8NAB4_ORNAN (NOVA alternative splicing regulator 2 n=3 Tax=Monotremata TaxID=9255 RepID=A0A6I8NAB4_ORNAN)

HSP 1 Score: 89.7 bits (221), Expect = 5.910e-18
Identity = 54/155 (34.84%), Postives = 87/155 (56.13%), Query Frame = 1 
Query:    1 DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLVAGNSDGVERACALILHTIHAPDHNI--SGCAKLLSPELAAKIDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAE-IKANERLVTVQG 450
            D E  +K LVP+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LV G ++ +  A + I   +      +  S    +L P+     D ++  ++++  +  GLVIG+ GA + A++E S A + L QK E +   ER+VTV G
Sbjct:   69 DGEFFLKVLVPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAAHSFIAEKVREIPQAVAKSEAVNILQPQTTMNPDRAKQAKLIVSNSTAGLVIGKGGATVKAIMEQSGAWVQLSQKPEGVNLQERVVTVSG 223
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51318.12389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGY3_ECTSI3.300e-7677.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLG6_9PHAE6.520e-7377.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIW2_9STRA2.950e-3547.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEM4_9STRA4.170e-2641.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1C6X2_9STRA5.540e-2138.31Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0HL77_9CRYP5.130e-2037.91Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S0GD86_9STRA1.020e-1838.92Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6J3AZP0_VICPA2.930e-1833.33RNA-binding protein Nova-2 n=1 Tax=Vicugna pacos T... [more]
A0A5N4DV81_CAMDR4.200e-1833.33RNA-binding protein Nova-2 n=1 Tax=Camelus dromeda... [more]
A0A6I8NAB4_ORNAN5.910e-1834.84NOVA alternative splicing regulator 2 n=3 Tax=Mono... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51318contigH-elongata_contig51318:215..3382 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score241.9
Seed ortholog evalue2e-61
Seed eggNOG ortholog2880.D8LGY3
KEGG koko:K14944
EggNOG free text desc.RNA splicing
EggNOG OGsKOG2191@1,KOG2191@2759
Ec32 ortholog descriptionK Homology domain
Ec32 orthologEc-14_001470.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Exons4
Model size471
Cds size471
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51318.12389.1prot_H-elongata_contig51318.12389.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51318 215..3382 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930840.0049026-CDS-H-elongata_contig51318:214..2981622930840.0049026-CDS-H-elongata_contig51318:214..298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 215..298 +
1691679592.6357834-CDS-H-elongata_contig51318:214..2981691679592.6357834-CDS-H-elongata_contig51318:214..298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 215..298 +
1622930840.018314-CDS-H-elongata_contig51318:1643..17511622930840.018314-CDS-H-elongata_contig51318:1643..1751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 1644..1751 +
1691679592.648141-CDS-H-elongata_contig51318:1643..17511691679592.648141-CDS-H-elongata_contig51318:1643..1751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 1644..1751 +
1622930840.0340247-CDS-H-elongata_contig51318:2494..26021622930840.0340247-CDS-H-elongata_contig51318:2494..2602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 2495..2602 +
1691679592.6573465-CDS-H-elongata_contig51318:2494..26021691679592.6573465-CDS-H-elongata_contig51318:2494..2602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 2495..2602 +
1622930840.052483-CDS-H-elongata_contig51318:3211..33821622930840.052483-CDS-H-elongata_contig51318:3211..3382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 3212..3382 +
1691679592.6669822-CDS-H-elongata_contig51318:3211..33821691679592.6669822-CDS-H-elongata_contig51318:3211..3382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51318 3212..3382 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51318.12389.1

>prot_H-elongata_contig51318.12389.1 ID=prot_H-elongata_contig51318.12389.1|Name=mRNA_H-elongata_contig51318.12389.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
DPESAIKFLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTM
ERAVLVAGNSDGVERACALILHTIHAPDHNISGCAKLLSPELAAKIDVSQ
RMLIPLTAGGLVIGRKGANIAALLEASRAKMTLGQKAEIKANERLVTVQG
KLPHAVK
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mRNA from alignment at H-elongata_contig51318:215..3382+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51318.12389.1 ID=mRNA_H-elongata_contig51318.12389.1|Name=mRNA_H-elongata_contig51318.12389.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3168bp|location=Sequence derived from alignment at H-elongata_contig51318:215..3382+ (Himanthalia elongata Himel1 dioecious)
GATCCCGAGTCGGCAATCAAGTTTCTGGTGCCCAATTACCTGGCTGGTAG
CTTGATCGGAAAGAAAGGCGCGACCATCAAGGACGTGAGTGAGAAAGGGC
ACACAGATACATGAGAGAAGGCATTAACACCTAACCTGTCAGCTCGATCT
AACCTGTTGACCTCGCGCGCGATCGAGCACCTTCGCCACCAGTTTCTTCC
CCCCCCCCAACCTTTTCTACAGCCACGCGATTTTTTGTTTGTTTTGTTTT
GTTTTGTTATAATAGTAGTATTAACCCTTCCGGAACTAGTTTTTAAGTTT
TATATTGAATTTAGTAGTATAAAAATCGAGTTCGATAGGGTTATTAGTAC
CGTATATTTCCCCCGACGGGTTGCCGCATTCGGGTTAGCATGGGATTGGA
TTAACCCGGGCACCACAAATTGTAAATAAATGACCCTTGCTCTTTTGTTT
GTTTTTGTTTTGTTTTGCTCCGCCATGATGTTGTTGATGGTGTTGATGAT
GTTGATGATGCTGTGATGGCGCGCATTCCTCACATGCAATGCACCCACCG
GTGTGACGATGACATGTTTACATGCTGCTTGTTTCTTGGGGAGTATATTA
TATATAGTATATTATAGGATATTGTATATTATGTATATATATATATATAT
ATTAATTTGTTTTTCAAGTGATGTGATAACGGCCTCCTGATGGAGACGCA
GTTGGGGGAAATCTCTACGCCAAACCAGCTTATCTTTAAAAGTAGTATCT
TCTAATGTCTAGTTCAGTCTATTTCAGCCTCCCCCGGCGCGTCGTGGCGA
CGAAAAAGGTTAGTGGTGGTAGTGGTGGTGCTTATGGTGGTGGGTCTGAG
CTCTTATGGGCAGAAGCCTCAAAAGCGCGCGCAGGCCTCGTTACTCTCTT
ATGGGCTAATAGCGTGGTGTTATGATAGAAACATATCGATAGATACCTTG
CCCGTTTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTCTACTTA
CTCATGCCCCTGAAGCAAGCACGCGTCACGCGGCGTTGAACTCGAAACAC
CCCCAGGCGAATACGGTCCATTCGTCTCGAAAGAAAGAGATAGAGAGACT
GGGAGCCGTTGCCCTCTTCTTTGTCAGTCGACATAAAGAAAAAAGAAAAA
ATGAAACAGGGAGACATACTAAAAATGGAAGAAAAAAACAAAAACAAAAT
GGAGATATTTTTGGTTTGATTTGATGACCATCCATCCATCCATCGGCGTT
GTTTTCTTAAAAATAACATATGAACTCGTCATTATTTCCTTCCCTACTTC
ATTTCGACATAAGACATAATACACACATATATAGTACACGTATGCACACA
CAACCCTCGACCCACACCAGAATCTCTCTCCCTCCCTCTCTTTTTTCCCT
CCCTCGCCGTTCGATGTCCCTGTATGTAGATACAAGTGAAGACGTCCTGC
ATGGTCCGCATCGCCACGAGCGGGATGTACTTCCCCGGCACGATGGAGAG
GGCGGTGTTGGTGGCAGGCAACTCCGACGGAGTAGAGGTGAGCTTTTCGG
CGTGTGCTATGTCGACGGTGAAGGGAATGGGGGATATGAGGGGGGGGTGG
GGGGGGGGGGAATAGCGCCCCAGGCGGGGCGGTATGACTATAGCGTAACG
CTGGGGGCGCTGGAAGGGAGGGCATTGCGGCGCTTGGCTTGTTTTTGGCT
CTTGGTCGGGACGCGTCATGATGCGGTCGCGCATCACCCGCGGTGACGAG
GGAGTGCCTTGATGGACTCGGCACAGGCGCGGATAGCCTAAATACGCGAA
GCGCCGTACGTATTGTACCGATACGTTGTGTCATACGCGATGGTAGTAGT
ATGGTGTAGCGACGTGTATAGCGTAGCGTGCTGAAACATTACTCTCGCGC
GCTGTTGTGGCTCTACAGATTCAGGGAGCGAACATAAAAAAAGCTGTTCT
GATTCGCGCGTGTTCAACCTTCCTACGAACGGCGAACGCCTTACGCGGGA
TGTTTTCGCACGACATGAAAAAGAAACATTAAAAAAAAAGAGAACTTCAG
CAGCGGGGTCACATGCAAACTTATTGTCTCTCCGCCAAATGAGACGCTTC
TCTATCTTATCCTTATCTACCCCCAGCACACGTAGGAGGCGCCAGGCGTG
AACGGCTCGATTCCGGTGTTGCGTCCGTCCGCTAAACTCTATCATCAACC
GCCCTCCTAAAGTATGTCTCTCTCTTTCTCTCTCTGTCTCTCTTTCTCTC
TCTCCTCCCCTTTTTTTGTCTCCTGAACAGCGAGCATGTGCCCTGATCCT
CCATACCATCCACGCCCCCGACCACAACATCTCAGGGTGCGCGAAACTGC
TCAGCCCGGAGCTTGCTGCCAAAATAGACGTGTCGCAGGTGAGCGGAGCA
AGGAAGGCCCTTGAGACGGCGCCCTCGCGGGACGCGCGCCATTCTCCCCA
TTAAGTATTATACGGCGCCATTCGGGGTGTCCCCCGACGCCCGACGAAAT
TTCGAATTTTCTGGCATCACTACTGTTTTAAAGTTGTTTTTATTTTTTGT
CGGGCGGGTGGGCAGGCGGGGGAAGGACGCAAAAGGCTGCTGTTGTTGCT
GTTGCTGTTGAAAAAGATACTCCGTGGAGAGATAGTCTTCGTGTGGGGCT
GTGTGTGTGAGGGGGAGTGTTTGCGCTTTTTTTTTTGCTTTTTTTTTTCG
TAACTTGGAGTTTAACGACGTCGCCCATCTGTCTCTCGCGCAAGTGACCT
CTCAGGTTAGGGGTGTGCCGCTAGCGTGTAGCCTTAGTCGGCGATGGATT
TTCGTTTTGCTGTTATGGCGTGGCGTGGCGTGGCGTGGCTTATCGTAGCT
CGGCGTAGTTTGGCTTTGGCTTGGCAACCTCCCGCGGGCGCCTCTTGCTG
TGTTTGAACCTTATCGCACATGTCCCCCCTTCGTGGCTTGTCTCGGTGTT
TTGTTTTGCTTGCATCATGTTGTTTTTGCGTCCGTCTGTCGTGGCAGCGC
ATGCTCATACCCTTGACGGCGGGAGGTTTGGTGATCGGTCGAAAAGGCGC
AAACATCGCCGCGCTCCTGGAGGCCTCGAGGGCGAAGATGACGCTCGGAC
AGAAGGCCGAGATCAAGGCCAACGAGCGGCTTGTGACGGTTCAGGGCAAG
CTGCCGCATGCCGTCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig51318:215..3382+

>mRNA_H-elongata_contig51318.12389.1 ID=mRNA_H-elongata_contig51318.12389.1|Name=mRNA_H-elongata_contig51318.12389.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig51318:215..3382+ (Himanthalia elongata Himel1 dioecious)
GATCCCGAGTCGGCAATCAAGTTTCTGGTGCCCAATTACCTGGCTGGTAG
CTTGATCGGAAAGAAAGGCGCGACCATCAAGGACGATCCCGAGTCGGCAA
TCAAGTTTCTGGTGCCCAATTACCTGGCTGGTAGCTTGATCGGAAAGAAA
GGCGCGACCATCAAGGACATACAAGTGAAGACGTCCTGCATGGTCCGCAT
CGCCACGAGCGGGATGTACTTCCCCGGCACGATGGAGAGGGCGGTGTTGG
TGGCAGGCAACTCCGACGGAGTAGAGATACAAGTGAAGACGTCCTGCATG
GTCCGCATCGCCACGAGCGGGATGTACTTCCCCGGCACGATGGAGAGGGC
GGTGTTGGTGGCAGGCAACTCCGACGGAGTAGAGCGAGCATGTGCCCTGA
TCCTCCATACCATCCACGCCCCCGACCACAACATCTCAGGGTGCGCGAAA
CTGCTCAGCCCGGAGCTTGCTGCCAAAATAGACGTGTCGCAGCGAGCATG
TGCCCTGATCCTCCATACCATCCACGCCCCCGACCACAACATCTCAGGGT
GCGCGAAACTGCTCAGCCCGGAGCTTGCTGCCAAAATAGACGTGTCGCAG
CGCATGCTCATACCCTTGACGGCGGGAGGTTTGGTGATCGGTCGAAAAGG
CGCAAACATCGCCGCGCTCCTGGAGGCCTCGAGGGCGAAGATGACGCTCG
GACAGAAGGCCGAGATCAAGGCCAACGAGCGGCTTGTGACGGTTCAGGGC
AAGCTGCCGCATGCCGTCAAGCGCATGCTCATACCCTTGACGGCGGGAGG
TTTGGTGATCGGTCGAAAAGGCGCAAACATCGCCGCGCTCCTGGAGGCCT
CGAGGGCGAAGATGACGCTCGGACAGAAGGCCGAGATCAAGGCCAACGAG
CGGCTTGTGACGGTTCAGGGCAAGCTGCCGCATGCCGTCAAG
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