prot_H-elongata_contig50947.12354.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50947.12354.1
Unique Nameprot_H-elongata_contig50947.12354.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
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BLAST of mRNA_H-elongata_contig50947.12354.1 vs. uniprot
Match: D7G403_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G403_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.420e-29
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 0 
Query:    1 MSESHVRETFDLLCENLQSEAELQVLLGLLPESKGGVGILALGLLSKNNSVRRSTVTFFKRLESFDSTRPAVRCMNDFFKLSLNRQAQEL 90
            + E    + F+LL E L +EAELQVLLGLLPESK G G+LALGLLS++ S RRSTV  FK+LESF+STRPAV CMNDFFKL+L+RQAQEL
Sbjct:  516 VGEEVAAKAFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSRSASTRRSTVVLFKKLESFESTRPAVLCMNDFFKLALSRQAQEL 605
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BLAST of mRNA_H-elongata_contig50947.12354.1 vs. uniprot
Match: A0A836CED8_9STRA (Docking domain of Afi1 for Arf3 in vesicle trafficking-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.290e-13
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 0 
Query:    1 MSESHVRETFDLLCENLQSEAELQVLLGLLPESKGGVGILALGLLSKNNSVRRSTVTFFKRLESFDSTRPAVRCMNDFFKLSLNR 85
            + +  V+E F  L   LQSEA LQVLLGL+PESKGG+ +L  GL+  +  VR   ++  +RL +F+STRPA+  MND   ++  R
Sbjct:  884 LDDQEVKEIFRDLDTALQSEASLQVLLGLMPESKGGIFVLGCGLMHGSAEVRAHALSLHRRLNAFESTRPAIYAMNDLLAMTYMR 968
[Close]
BLAST of mRNA_H-elongata_contig50947.12354.1 vs. uniprot
Match: A0A1U7LH49_NEOID (Protein mesA n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LH49_NEOID)

HSP 1 Score: 52.0 bits (123), Expect = 2.800e-5
Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 0 
Query:    4 SHVRETFDLLCENLQSEAELQVLLGLLPESKGGVGILALGLLSKNNSVRRSTVTFFKRLESFDSTRPAVRCMNDFFKLSLNRQAQE 89
            S V + F  L +N+    +L  LL  LP+ KGG+  LALGL   + +VR++ V   +RLE   + R  +  MN F KL+L R  QE
Sbjct:  430 SEVSQFFFTLRDNVTEIEQLNELLCSLPQHKGGLSPLALGLFHPDFNVRQAVVDILERLERHIAGRHFINAMNRFQKLALIRLKQE 515
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50947.12354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G403_ECTSI2.420e-2970.00UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CED8_9STRA3.290e-1345.88Docking domain of Afi1 for Arf3 in vesicle traffic... [more]
A0A1U7LH49_NEOID2.800e-539.53Protein mesA n=1 Tax=Neolecta irregularis (strain ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28245FAMILY NOT NAMEDcoord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50947contigH-elongata_contig50947:1626..3074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50947.12354.1mRNA_H-elongata_contig50947.12354.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50947 599..3146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50947.12354.1 ID=prot_H-elongata_contig50947.12354.1|Name=mRNA_H-elongata_contig50947.12354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MSESHVRETFDLLCENLQSEAELQVLLGLLPESKGGVGILALGLLSKNNS
VRRSTVTFFKRLESFDSTRPAVRCMNDFFKLSLNRQAQELSANSSDPAAN
SAGACFGNEVGARHSVPA*
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