mRNA_H-elongata_contig50827.12338.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50827.12338.1
Unique NamemRNA_H-elongata_contig50827.12338.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A6H5KEM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM1_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 9.910e-94
Identity = 192/381 (50.39%), Postives = 234/381 (61.42%), Query Frame = 1
Query:    1 QQALARISCGVLRAVARQTLPEIDANGFLELIDGGDGEGGGGSSAISPPSGELLSSSPLRLCRYAGPQGGVAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGAMESTVPDSLLPPWL-----KQKPRPNTTR--------------GDRSGRKVTIATLSAGLHLCGGAASPPGEXXXAAGIVATSSGDDFLSRGSPLAIARNLAGRDDEIRRAFGPFAPGGMTILSSDPLLVRLHGFASRAECDAIMAGVIAAPSSSASGDLEESTTWLSTDAQRDKSDGLRRSSTCWIADGAL-PHLTELTERVSGLSGLPSRFMEKWQ 1083
            ++AL  IS G+L+AV RQ+LPEID   FL L+D G+G  G G S  SP     +S+SPLR+CRYAG   GVAFG HTD TFLT IPCAS PGLEI++P++GRW RPEA+  CRP +DVMLLAGELLQ  GRGRY+A+VHRVV PAG+   +PRVSTPLLLRG   + +  S+LPP +     ++      TR              GD  G ++ +  L A L   GGA   PG      G     S  D +S   PLA A+      D+IR  F P+A  G+ +LS DPLLVRL GFAS  +C AI+              LEESTTW    AQ + SD LRRS+T W+AD  L P L  LTERVSG+SG+PS FMEKWQ
Sbjct:   91 RRALTAISGGILQAVLRQSLPEIDPASFLGLVDPGEGRQGVGGS--SPK----MSASPLRVCRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGST--EPRVSTPLLLRGVAGAAIRGSMLPPAVAARLERRSEEAKQTRREIRRAAGGSSWEEGDEGG-ELNMTDLWAALQFRGGAT--PGSSGGGDGWSGEIS--DSVSSPPPLAQAKTT----DQIRECFEPYARDGVAVLSVDPLLVRLRGFASPDQCSAII--------DQGMESLEESTTWGGAGAQTE-SDVLRRSATTWLADDCLAPLLGRLTERVSGMSGVPSAFMEKWQ 445          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: D7FP64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP64_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 5.010e-92
Identity = 188/382 (49.21%), Postives = 234/382 (61.26%), Query Frame = 1
Query:    1 QQALARISCGVLRAVARQTLPEIDANGFLELIDGGDGEGGGGSSAISPPSGELLSSSPLRLCRYAGPQGGVAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGAMESTVPDSLLPPWL-----KQKPRPNTTR--------------GDRSGRKVTIATLSAGLHLCGGAA-SPPGEXXXAAGIVATSSGDDFLSRGSPLAIARNLAGRDDEIRRAFGPFAPGGMTILSSDPLLVRLHGFASRAECDAIMAGVIAAPSSSASGDLEESTTWLSTDAQRDKSDGLRRSSTCWIADGAL-PHLTELTERVSGLSGLPSRFMEKWQ 1083
            ++AL  IS G+L+AV RQ+LPEID   FL L+D G+G  G G S+ +      +S+SPLR+CRYAG   GVAFG HTD TFLT IPCAS PGLEI++P++GRW RPEA+  CRP +DVMLLAGELLQ  GRGRY+A+VHRVV PAG+   +PRVSTPLLLRG   + +  S+LPP +     ++      TR              GD +G ++ +  L A L   GGA     G      G ++     D +S   PLA  +      D+IR  F P+A  G+ +LS DPLLVRL GFAS  +C AI+              LEESTTW    AQ + SD LRRS+T W+AD  L P L  LTERVSG+SGLPS FMEKWQ
Sbjct:  240 RRALTAISGGILQAVLRQSLPEIDPAAFLGLVDPGEGRQGVGGSSPN------MSASPLRICRYAGGGDGVAFGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRYQAAVHRVVRPAGST--EPRVSTPLLLRGIAGAAIRGSMLPPAVAARLERRSEEAKQTRREIXXXXXXXXXEEGDEAG-ELNMTDLWAALQFRGGATPESSGGGDGWGGEIS-----DSVSSPPPLAQTKTT----DQIRECFEPYARDGVAVLSVDPLLVRLRGFASPGQCSAII--------DQGMESLEESTTWGGAGAQTE-SDALRRSATTWLADDCLAPLLGRLTERVSGMSGLPSAFMEKWQ 594          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A7S4D4K1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4K1_HETAK)

HSP 1 Score: 100 bits (250), Expect = 4.770e-22
Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  211 VAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLR 483
            V FGAHTD TF+T IPC++ PGLE+  PA   W RPE  P+CRP  D+++L GELLQ L  G Y A+VHRVV   G      RVS PLL+R
Sbjct:    6 VTFGAHTDTTFVTLIPCSNIPGLEVFSPALDGWVRPE--PACRPGRDIIILPGELLQVLSAGHYPAAVHRVVSVGGGTA---RVSAPLLVR 91          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: F0YH17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH17_AURAN)

HSP 1 Score: 107 bits (266), Expect = 1.640e-21
Identity = 94/308 (30.52%), Postives = 128/308 (41.56%), Query Frame = 1
Query:  160 LSSSPLRLCRYAGPQGGVAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGAMESTVPDSLLPPWLKQKPRPNTTRGDRSGRKVTIATLSAGLHLCGGAASPPGEXXXAAGIVATSSGDDFLSRGSPLAIARNLAGRDDEIRRAFGPFAPGGMTILSSDPLLVRLHGFASRAECDAIMAGVIAAPSSSASGDLEESTTWLSTDAQRDKSDGLRRSSTCWIADGALPHLTELTERVSGLSGLPSRFMEKWQ 1083
            +S++  RLCRYA     V FGAHTD +F T +P +S PGLE+  P+   W RPEAA      TDV+ + GE L+    G +RA VHRV+   G      RVSTPLL+RG                              R+  +  ++A  H C  A         A  I    +  D  S  +P    R  A  +     A G    G   +LS+DPL+V L GFAS A+C A++A                                   S T W+ D A P   +L  R + ++ LP    E+W+
Sbjct:  743 VSTTAHRLCRYAPSSKAVVFGAHTDTSFFTLVPLSSPPGLEVFDPSLDAWVRPEAAEGAEA-TDVLCMPGEFLELASAGAFRAVVHRVL--GGPT---KRVSTPLLVRG-----------------------------DRRFALGGVNA--HDCWRALQEREPDRAAEAIRGAPAHVDGASYVAPH---RTRAEAETFYSLALG----GAAEVLSADPLVVLLPGFASDADCAAVLAAA---------------------------------SRTAWLDDAAAPG--DLALRAAAVAELPPAHAERWR 971          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A7S3NIL1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIL1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.460e-21
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
Query:  160 LSSSPLRLCRYAGPQGGVAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQ--PRVSTPLLLRG 486
            +S++  RLCRY   +  VAFG+HTD TFLT +PCAS PGLE+  P+ G +   EA+P   P  DV+ LAGE L  L  G+Y ++VHRV+  +     +   R STPLLLR 
Sbjct:  178 VSTTVFRLCRYESIKEDVAFGSHTDTTFLTLVPCASQPGLEVFDPSIGAFLCHEASPLACPGRDVICLAGEFLDLLSNGKYGSAVHRVILTSADAKQRRTTRSSTPLLLRA 288          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A1Z5J8Q8_FISSO (2OG-FeII_Oxy domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8Q8_FISSO)

HSP 1 Score: 97.4 bits (241), Expect = 1.840e-18
Identity = 64/147 (43.54%), Postives = 78/147 (53.06%), Query Frame = 1
Query:   88 ELIDGGDGEGGGGSSAISPPSGELLSSSPLRLCRYAGPQGGVA----------FGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGAMES 498
            EL+D G   G GGS          +S SP RLCRY  P               FGAHTD+TF+T +P A+ PGLE+   A+ RW+RPEA  +      V+L+ GE LQ L R    ASVHRVV  A     + R S PLLLRG  E+
Sbjct:  456 ELVDHG---GSGGS----------VSMSPHRLCRYYSPSTDAGSKDDQKYREVFGAHTDSTFITAVPVATVPGLEVYDEAAERWYRPEALLTSSHCRYVVLVPGEFLQLLTRQEILASVHRVVVGA-----EQRFSAPLLLRGRPEA 584          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A7S2G6D7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6D7_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.250e-18
Identity = 63/158 (39.87%), Postives = 85/158 (53.80%), Query Frame = 1
Query:   82 FLELIDGGDGEGGGGSSAISPPSGELLSSSPLRLCRYAGPQGGVAFGAHTDATFLTTIPCAST---PGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGA----MESTVPDSLLPPWLK 534
            FL L+D GD         +S      LS +  R CRY      +AFG+HTD+TF T IP AS+   PG+++   + G+W  PE   +C   TDV+++ GE LQ L  G Y A+VHRV  P     +  RVSTP+L+RG     +E  VP  L P  +K
Sbjct:   55 FLGLMDRGD------EVELSS-----LSHTVQRFCRYGSEGKRIAFGSHTDSTFFTVIPVASSVLQPGVQVF--SQGQWLCPET--NCDAETDVLIMTGEFLQVLSNGVYPAAVHRVNRPR----HGSRVSTPMLVRGKPSAFLERHVPTGLYPANVK 193          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A836CHQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 4.240e-14
Identity = 68/210 (32.38%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    7 ALARISCGVLRAVARQTLPEIDANGFLELIDGGD-------GEGGGG--------SSAISPPSGELLSSSPLRLCRYAGPQG-----------------------------GVAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGAMESTV 504
            AL+R++  V+ A AR     I       L+DG D       G G G         ++A    +   +S +  RLCRY+ P+                               V FGAHTD T +T +PC S PG+++     G W  PE +P      DV +L+GELLQAL  G++ A+VHRVV  A     Q R+S PLL+R    ++V
Sbjct:  154 ALSRVAAAVVAAAARDC--GIAPTELCALMDGDDSYVETVPGSGPGNDPEARNGVAAAAERAAATRMSETVHRLCRYSPPEPEHTAAESAXXXXXXXXXXXXXXXXXXXSVSVTFGAHTDTTMVTLVPC-SVPGIQV-HTRGGGWVGPEGSPCIARGRDVAVLSGELLQALSAGKFPAAVHRVVAGA-----QGRLSAPLLVRERAGASV 354          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: A0A7S2DXD9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DXD9_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 7.900e-10
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  211 VAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLLRGA 489
            +AF AHTD T+LT IPCAS PGLE+ R +SGR          R   +V +L G+ LQ++    Y A+ HRV+ P        R+S PLL+R A
Sbjct:    9 LAFPAHTDGTWLTIIPCASQPGLEV-RASSGRV---SLEKQGRYGINVAVLTGDFLQSMSNFEYTAASHRVLRPQSG--DPERLSAPLLMRAA 95          
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Match: UPI00023E6CDE (gibberellin 2-beta-dioxygenase 1-like n=2 Tax=cellular organisms TaxID=131567 RepID=UPI00023E6CDE)

HSP 1 Score: 55.1 bits (131), Expect = 1.940e-5
Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 1
Query:  205 GGVAFGAHTDATFLTTIPCASTPGLEILRPASGRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLYQPRVSTPLLL 480
            G +   AH+D  FLT +P A+ PGL++   A G W      P    +  V +  G++LQ    G + ++VHRV+ P+G    + R+S P+ L
Sbjct:   61 GAIRAAAHSDINFLTVLPAANQPGLQVKH-ADGHWID---VPGDFGYLIVNI--GDMLQEATNGYFPSTVHRVINPSGPSARRSRISLPIFL 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50827.12338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KEM1_9PHAE9.910e-9450.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP64_ECTSI5.010e-9249.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4D4K1_HETAK4.770e-2256.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YH17_AURAN1.640e-2130.52Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NIL1_9STRA3.460e-2147.75Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1Z5J8Q8_FISSO1.840e-1843.542OG-FeII_Oxy domain-containing protein n=2 Tax=Fis... [more]
A0A7S2G6D7_9STRA4.250e-1839.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CHQ9_9STRA4.240e-1432.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DXD9_9EUKA7.900e-1044.09Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
UPI00023E6CDE1.940e-533.70gibberellin 2-beta-dioxygenase 1-like n=2 Tax=cell... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50827contigH-elongata_contig50827:2391..3477 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.9
Seed ortholog evalue1e-79
Seed eggNOG ortholog2880.D7FP64
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
EC1.14.11.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size1087
Cds size1086
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930834.278478-CDS-H-elongata_contig50827:2390..34761622930834.278478-CDS-H-elongata_contig50827:2390..3476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50827 2391..3476 +
1691679590.4494677-CDS-H-elongata_contig50827:2390..34761691679590.4494677-CDS-H-elongata_contig50827:2390..3476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50827 2391..3476 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50827.12338.1prot_H-elongata_contig50827.12338.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50827 2391..3476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50827.12338.1

>prot_H-elongata_contig50827.12338.1 ID=prot_H-elongata_contig50827.12338.1|Name=mRNA_H-elongata_contig50827.12338.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
QQALARISCGVLRAVARQTLPEIDANGFLELIDGGDGEGGGGSSAISPPS
GELLSSSPLRLCRYAGPQGGVAFGAHTDATFLTTIPCASTPGLEILRPAS
GRWWRPEAAPSCRPWTDVMLLAGELLQALGRGRYRASVHRVVCPAGTLLY
QPRVSTPLLLRGAMESTVPDSLLPPWLKQKPRPNTTRGDRSGRKVTIATL
SAGLHLCGGAASPPGEEESAAGIVATSSGDDFLSRGSPLAIARNLAGRDD
EIRRAFGPFAPGGMTILSSDPLLVRLHGFASRAECDAIMAGVIAAPSSSA
SGDLEESTTWLSTDAQRDKSDGLRRSSTCWIADGALPHLTELTERVSGLS
GLPSRFMEKWQA
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mRNA from alignment at H-elongata_contig50827:2391..3477+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50827.12338.1 ID=mRNA_H-elongata_contig50827.12338.1|Name=mRNA_H-elongata_contig50827.12338.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1087bp|location=Sequence derived from alignment at H-elongata_contig50827:2391..3477+ (Himanthalia elongata Himel1 dioecious)
CAGCAAGCGTTGGCGAGGATCTCGTGCGGGGTACTGCGAGCCGTTGCGCG ACAGACCCTGCCGGAGATCGACGCGAACGGCTTCCTCGAGCTCATCGACG GCGGAGACGGCGAAGGCGGCGGGGGGTCGTCAGCGATCTCTCCCCCCTCT GGAGAGCTGCTGTCTTCCTCCCCTCTGCGACTGTGTCGGTACGCGGGTCC CCAAGGCGGCGTGGCGTTCGGGGCTCACACCGACGCCACCTTCCTGACAA CCATCCCATGCGCTTCCACCCCGGGTCTGGAAATCCTCCGACCCGCTTCA GGCCGCTGGTGGAGGCCAGAAGCGGCTCCGAGCTGCCGGCCGTGGACAGA CGTGATGCTCCTCGCGGGGGAGCTTCTGCAAGCGCTCGGGCGTGGTCGGT ACAGGGCCTCCGTGCACCGCGTGGTGTGCCCGGCGGGGACGTTATTGTAT CAACCCCGCGTTTCCACACCTTTGCTCTTGCGCGGCGCTATGGAATCCAC TGTTCCGGACTCGCTGCTGCCACCATGGCTGAAGCAGAAGCCGCGACCGA ATACCACCCGCGGCGATCGGTCGGGGCGGAAGGTCACCATAGCGACGCTG TCGGCAGGACTTCATCTCTGCGGGGGAGCAGCTTCCCCTCCCGGCGAGGA AGAATCCGCCGCCGGGATTGTAGCCACCTCCTCTGGTGACGATTTCCTGA GCCGCGGCTCTCCGCTTGCGATCGCGCGGAATCTCGCCGGCCGGGACGAC GAGATCCGGAGGGCTTTCGGGCCCTTCGCCCCAGGCGGGATGACTATCCT CAGCTCGGACCCACTCCTGGTAAGGCTGCACGGGTTCGCATCCCGCGCGG AATGCGACGCGATCATGGCCGGCGTCATCGCTGCCCCCTCCTCGTCAGCC TCTGGCGACCTGGAAGAGTCGACCACCTGGCTGAGCACGGACGCCCAGCG AGATAAGTCGGACGGTCTGAGGAGGAGCAGCACGTGCTGGATCGCCGACG GGGCGTTGCCTCACCTGACGGAGCTGACGGAAAGGGTCAGCGGTTTGTCG GGGCTGCCCTCAAGGTTTATGGAGAAGTGGCAGGCGG
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Coding sequence (CDS) from alignment at H-elongata_contig50827:2391..3477+

>mRNA_H-elongata_contig50827.12338.1 ID=mRNA_H-elongata_contig50827.12338.1|Name=mRNA_H-elongata_contig50827.12338.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2172bp|location=Sequence derived from alignment at H-elongata_contig50827:2391..3477+ (Himanthalia elongata Himel1 dioecious)
CAGCAAGCGTTGGCGAGGATCTCGTGCGGGGTACTGCGAGCCGTTGCGCG
ACAGACCCTGCCGGAGATCGACGCGAACGGCTTCCTCGAGCTCATCGACG
GCGGAGACGGCGAAGGCGGCGGGGGGTCGTCAGCGATCTCTCCCCCCTCT
GGAGAGCTGCTGTCTTCCTCCCCTCTGCGACTGTGTCGGTACGCGGGTCC
CCAAGGCGGCGTGGCGTTCGGGGCTCACACCGACGCCACCTTCCTGACAA
CCATCCCATGCGCTTCCACCCCGGGTCTGGAAATCCTCCGACCCGCTTCA
GGCCGCTGGTGGAGGCCAGAAGCGGCTCCGAGCTGCCGGCCGTGGACAGA
CGTGATGCTCCTCGCGGGGGAGCTTCTGCAAGCGCTCGGGCGTGGTCGGT
ACAGGGCCTCCGTGCACCGCGTGGTGTGCCCGGCGGGGACGTTATTGTAT
CAACCCCGCGTTTCCACACCTTTGCTCTTGCGCGGCGCTATGGAATCCAC
TGTTCCGGACTCGCTGCTGCCACCATGGCTGAAGCAGAAGCCGCGACCGA
ATACCACCCGCGGCGATCGGTCGGGGCGGAAGGTCACCATAGCGACGCTG
TCGGCAGGACTTCATCTCTGCGGGGGAGCAGCTTCCCCTCCCGGCGAGGA
AGAATCCGCCGCCGGGATTGTAGCCACCTCCTCTGGTGACGATTTCCTGA
GCCGCGGCTCTCCGCTTGCGATCGCGCGGAATCTCGCCGGCCGGGACGAC
GAGATCCGGAGGGCTTTCGGGCCCTTCGCCCCAGGCGGGATGACTATCCT
CAGCTCGGACCCACTCCTGGTAAGGCTGCACGGGTTCGCATCCCGCGCGG
AATGCGACGCGATCATGGCCGGCGTCATCGCTGCCCCCTCCTCGTCAGCC
TCTGGCGACCTGGAAGAGTCGACCACCTGGCTGAGCACGGACGCCCAGCG
AGATAAGTCGGACGGTCTGAGGAGGAGCAGCACGTGCTGGATCGCCGACG
GGGCGTTGCCTCACCTGACGGAGCTGACGGAAAGGGTCAGCGGTTTGTCG
GGGCTGCCCTCAAGGTTTATGGAGAAGTGGCAGGCGCAGCAAGCGTTGGC
GAGGATCTCGTGCGGGGTACTGCGAGCCGTTGCGCGACAGACCCTGCCGG
AGATCGACGCGAACGGCTTCCTCGAGCTCATCGACGGCGGAGACGGCGAA
GGCGGCGGGGGGTCGTCAGCGATCTCTCCCCCCTCTGGAGAGCTGCTGTC
TTCCTCCCCTCTGCGACTGTGTCGGTACGCGGGTCCCCAAGGCGGCGTGG
CGTTCGGGGCTCACACCGACGCCACCTTCCTGACAACCATCCCATGCGCT
TCCACCCCGGGTCTGGAAATCCTCCGACCCGCTTCAGGCCGCTGGTGGAG
GCCAGAAGCGGCTCCGAGCTGCCGGCCGTGGACAGACGTGATGCTCCTCG
CGGGGGAGCTTCTGCAAGCGCTCGGGCGTGGTCGGTACAGGGCCTCCGTG
CACCGCGTGGTGTGCCCGGCGGGGACGTTATTGTATCAACCCCGCGTTTC
CACACCTTTGCTCTTGCGCGGCGCTATGGAATCCACTGTTCCGGACTCGC
TGCTGCCACCATGGCTGAAGCAGAAGCCGCGACCGAATACCACCCGCGGC
GATCGGTCGGGGCGGAAGGTCACCATAGCGACGCTGTCGGCAGGACTTCA
TCTCTGCGGGGGAGCAGCTTCCCCTCCCGGCGAGGAAGAATCCGCCGCCG
GGATTGTAGCCACCTCCTCTGGTGACGATTTCCTGAGCCGCGGCTCTCCG
CTTGCGATCGCGCGGAATCTCGCCGGCCGGGACGACGAGATCCGGAGGGC
TTTCGGGCCCTTCGCCCCAGGCGGGATGACTATCCTCAGCTCGGACCCAC
TCCTGGTAAGGCTGCACGGGTTCGCATCCCGCGCGGAATGCGACGCGATC
ATGGCCGGCGTCATCGCTGCCCCCTCCTCGTCAGCCTCTGGCGACCTGGA
AGAGTCGACCACCTGGCTGAGCACGGACGCCCAGCGAGATAAGTCGGACG
GTCTGAGGAGGAGCAGCACGTGCTGGATCGCCGACGGGGCGTTGCCTCAC
CTGACGGAGCTGACGGAAAGGGTCAGCGGTTTGTCGGGGCTGCCCTCAAG
GTTTATGGAGAAGTGGCAGGCG
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