prot_H-elongata_contig50763.12327.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50763.12327.1
Unique Nameprot_H-elongata_contig50763.12327.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length259
Homology
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 3.740e-96
Identity = 165/258 (63.95%), Postives = 192/258 (74.42%), Query Frame = 0
Query:    1 INRFAGASDEAISRAIDNALGFPRGSPAVIRDPEDGSALAISDSLPDGLTLDATPVIPAQADALTSIGGGADETSALSRSDDGFHGSAEGGKLLNGNAQGDGADRGDNKGANGRNGGGDTAPSAPGGAQEFRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYAGVNIVKDA 258
            ++ FAGASDEAI+R I+ AL  PRG+PAV+RDPEDGSALA+SDSLPDGLT+DAT        A+ +  GG ++      S +GF+G  E G   N +A+       D+ G  G              A EFRGELLKFERVNAHLANERTWLAWVRTALSV+GVALSL+SL DDMG+  MDS A+ALGVAFV CTLFTYMTGWLRYTRVK+VLTWTGSQVKG FGRFGL+YFT FLG SL+LTVP+Y  AGVN+V+DA
Sbjct:   31 VSWFAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDAT--------AVPACSGGDNDRRRAESSGNGFYGRGESGNNKNSDAK----PAHDSAGGIGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDA 276          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.780e-34
Identity = 96/249 (38.55%), Postives = 129/249 (51.81%), Query Frame = 0
Query:    1 INRFAGASDEAISRAIDNALGFPRGSPAVIRDPEDGSALAISDSLPDGLTLDATPVIPAQADALTSIGGGADETSALSRSDDGFHGSAEGGKLLNGNAQGDGADRGDNKGANGRNGGGDTAPSAPGGAQEFRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLY 249
            I  F GA+D ++ R + +A   P  S  ++ DP DG  +A+S++LP GL L+   V     D  T    G   TSA    D    G               G + GD++ + G+               +FRGELLKFERVNAHLANERT+LAWVRTALSV+  A S+ SL +D        +    G  +VV  LFTY TGW+RY++V+ +L    S+VK  FGRFGL +  +FL    L T   Y +
Sbjct:   24 ITWFPGATDASLHRLVLDAFSLPLHSRFLLVDPADGCIVALSENLPSGLVLNVQHVQTQGRD--TPAKEGQAYTSAREDRDSEKSG---------------GLESGDDESSTGK---------------KFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGYCF 240          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK)

HSP 1 Score: 122 bits (307), Expect = 2.420e-30
Identity = 89/245 (36.33%), Postives = 121/245 (49.39%), Query Frame = 0
Query:    1 INRFAGASDEAISRAIDNALGFPRGSPAVIRDPEDGSALAISDSLPDGLTLDATPVIPAQADALTSIGGGADETSALSRSDDGFHGSAEGGKLLNGNAQGDGADRGDNKGANGRNGGGDTAPSAPGGAQEFRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDM--GTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLT 243
            I+ + G +DE + + I ++   P  +  ++ D  D + +A+S SLP G+ L   P+                        D  F     G      +   D A  GD  G  G               QEF+GELLKFERVNAHLANERTWLAWVRTAL+V+  A + L L +D   GT +       LG  ++   L TY TGWLRY +V+++L   GS +K  F RFGL +  R+L V LL+T
Sbjct:   27 ISWYDGTTDEGLEKLIADSFSLPSKTRFILIDSADNTTIALSSSLPSGIELQIQPL----------------------EGDPSFDEQRRGVLNKKASPDPDEAADGDGSGLQG---------------QEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFASGTQIF---VFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVT 231          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.150e-28
Identity = 63/107 (58.88%), Postives = 77/107 (71.96%), Query Frame = 0
Query:  131 FRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLAL-ALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFL 236
            FRG++LKFERV AHLANERTWLAWVRTALS + +A SLL+L DD  +     LAL  +G   V   LFT++TGWLRY RVK VL  T S++  +FGRFGL +  RF+
Sbjct:   91 FRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSA--SQLALFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSHQARFM 195          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.990e-27
Identity = 65/121 (53.72%), Postives = 79/121 (65.29%), Query Frame = 0
Query:  131 FRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALAL---GVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYL 248
            FRG++LKFERV AHLANERTWLAWVRTAL+ + ++ +LL+L DD      D LAL L   G   VV  LFT++TGWLRY RVK VL     ++   FGRFGL +  RFL   L+     YL
Sbjct:  115 FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDD---ATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLVAISIAYL 232          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.720e-26
Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 0
Query:  131 FRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYAG 251
            FRG++LKFERV AHLANERTWLAWVRTALS + +A SLL+L D+     +      +G   V   L T++TGWLRY RVK VL      +  +FGR GL +  RFL + L +    Y+  G
Sbjct:   67 FRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN)

HSP 1 Score: 103 bits (258), Expect = 1.770e-23
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 0
Query:  131 FRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYA 250
            FR +L+KFE + AHLANERTWLAWVRT+LS + VA SLL+L+ D     +  +   LG  F+V     ++TGWLRY R++ VL  T  +V   F R G+++  R +G+  +     YL A
Sbjct:   88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYLCA 207          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.540e-22
Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 0
Query:  131 FRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYAG 251
            FR +L+KFE + AHLANERT+LAW+RTAL+ + ++ SLL+L+ D     + +   ALG AFV     T++TGWLR+ R++ +L    +QV   F R GL +   F+ +   L   LYL  G
Sbjct:   82 FRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.150e-19
Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 0
Query:  131 FRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYAG 251
            F+ ++LKF+R+NAHLANERTWLAW+RT  S++   L+L +  +D  +        A+G A +V   FTYMTGW+RY +VK++L      +    GR  L+Y T FL    L TV +  + G
Sbjct:   58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQT-FLVFGTLCTVAVVYWMG 177          
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.240e-16
Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 0
Query:  130 EFRGELLKFERVNAHLANERTWLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALAL---GVAFVVCTLFTYMTGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYAG 251
            +F+ + +KFERV +HLANERTWLAW+R AL+++  A ++  L D +   +  +++LAL   G+ +V+    T + GWLRY R K +L  +   +   FG  G+      LG  L+ TV  Y   G
Sbjct:   98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCYWSLG 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50763.12327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LKT4_ECTSI3.740e-9663.95DUF202 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2Y0E1_9STRA1.780e-3438.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YD22_HETAK2.420e-3036.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2FKJ2_9STRA1.150e-2858.88Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WVC3_9STRA1.990e-2753.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GM95_9STRA1.720e-2648.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YI70_AURAN1.770e-2344.17Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S3K4A5_9STRA6.540e-2242.98Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7S2G4H1_9STRA1.150e-1942.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DFA2_9STRA2.240e-1637.60Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 144..210
e-value: 7.9E-15
score: 55.1
NoneNo IPR availablePANTHERPTHR34187FAMILY NOT NAMEDcoord: 143..214
NoneNo IPR availablePANTHERPTHR34187:SF2INNER MEMBRANE PROTEIN YIDHcoord: 143..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..250
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 235..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50763contigH-elongata_contig50763:1404..2240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50763.12327.1mRNA_H-elongata_contig50763.12327.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50763 1404..2240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50763.12327.1 ID=prot_H-elongata_contig50763.12327.1|Name=mRNA_H-elongata_contig50763.12327.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
INRFAGASDEAISRAIDNALGFPRGSPAVIRDPEDGSALAISDSLPDGLT
LDATPVIPAQADALTSIGGGADETSALSRSDDGFHGSAEGGKLLNGNAQG
DGADRGDNKGANGRNGGGDTAPSAPGGAQEFRGELLKFERVNAHLANERT
WLAWVRTALSVIGVALSLLSLMDDMGTVVMDSLALALGVAFVVCTLFTYM
TGWLRYTRVKKVLTWTGSQVKGSFGRFGLQYFTRFLGVSLLLTVPLYLYA
GVNIVKDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003807DUF202