prot_H-elongata_contig50733.12322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50733.12322.1
Unique Nameprot_H-elongata_contig50733.12322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length296
Homology
BLAST of mRNA_H-elongata_contig50733.12322.1 vs. uniprot
Match: A0A6H5L2H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H8_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 4.270e-125
Identity = 195/310 (62.90%), Postives = 230/310 (74.19%), Query Frame = 0
Query:    1 MTRKRQLVKEVQEHLAIGEALYWESRVDLVQSGG-----KQGTPRRSRRGEARRRYEDVAGLRRQHQKMAVNLPPMISTREGKLLAAEVFGDGVLKHLPSEDKGPRVGHCSSGYVCGHPVSRGKEGNRWCQTPVRASLESKMACKHHSHRRRGAGS-PSKEQKRFMLLAVEFYD-QKKVISWSRVVSHIRSRALPSELRQRRQVLAVGGRALAVSDAKIVLHGFVQCTLFWLAACRLTRRGYRFSTMAHASKAEFKDFLADLRATAAVPLLTQVSSPFVCVDDMSDGVR--------FYVSGYDQVCRVF 295
            MTRKR+L+++    +A+G   YWE  +DL   GG     K+GTPRRSRRG+ARR+++D A +  +  KM VNLPPM+STREGKLL+ EVFG GVL HL  ED+G RVGHCSSGYVCG PVSRGKEGNRWCQTPVR SLES+MAC HHSHRRR  G+ PSKEQ R+M+LA EF+D Q   I W RVVS++R+R  P EL QRRQVL  G RALAV+D +IVLHGFVQC  FWLAACRLTRRGY F  +AHASK +FK+FL+ LR  AA P  +  SSPFVC+DD   G R        +Y SGYDQVC +F
Sbjct:   80 MTRKRRLLQDTAARIAVGVVPYWEGGIDL---GGDIDEEKKGTPRRSRRGKARRKHQDSAPI--EQPKMGVNLPPMVSTREGKLLSVEVFGIGVLDHLRREDRGARVGHCSSGYVCGSPVSRGKEGNRWCQTPVRGSLESRMACMHHSHRRRAGGAGPSKEQLRYMMLADEFFDRQSGDICWQRVVSYLRARKSPRELAQRRQVLTAGDRALAVADTQIVLHGFVQCLFFWLAACRLTRRGYEFKMVAHASKGDFKEFLSRLRRKAAWPPPSPASSPFVCMDDKRSGKRQRQMQHPSYYASGYDQVCGMF 384          
BLAST of mRNA_H-elongata_contig50733.12322.1 vs. uniprot
Match: D7G151_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G151_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 9.180e-125
Identity = 194/305 (63.61%), Postives = 228/305 (74.75%), Query Frame = 0
Query:    1 MTRKRQLVKEVQEHLAIGEALYWESRVDLVQSGG-----KQGTPRRSRRGEARRRYEDVAGLRRQHQKMAVNLPPMISTREGKLLAAEVFGDGVLKHLPSEDKGPRVGHCSSGYVCGHPVSRGKEGNRWCQTPVRASLESKMACKHHSHRRRGAGS-PSKEQKRFMLLAVEFYD-QKKVISWSRVVSHIRSRALPSELRQRRQVLAVGGRALAVSDAKIVLHGFVQCTLFWLAACRLTRRGYRFSTMAHASKAEFKDFLADLRATAAVPLLTQVSSPFVCVDDMSDGVR--------FYVSGYDQ 290
            MTRKR+L++E +  +A+G   YWE  VDL   GG     K+GTPRRSRRG+ARR+ +D A +  +  KM VNLPPM+STREGKLL+ EVFG GVL HL  ED+G RVGHCSSGYVCG PV RGKEGNRWCQTPVR SLES+MAC HHSHRRR  G+ PSKEQ R+M+LA +FYD Q   I W RVVS++R+R  P EL QRRQVL  GGRA+AV+D KIVLHGFVQC  FWLAACRLTRRGY F+ +AHASK++FK+FL+ LR  AA P  +  SSPFVC+DD   G R        +Y SGYDQ
Sbjct:    1 MTRKRRLLQETEARIAVGVVPYWEGGVDL---GGDIDQEKKGTPRRSRRGKARRKQQDPAPI--EQPKMGVNLPPMVSTREGKLLSVEVFGIGVLDHLRREDRGARVGHCSSGYVCGSPVPRGKEGNRWCQTPVRGSLESRMACMHHSHRRRAGGTGPSKEQLRYMMLADDFYDRQSGDICWQRVVSYLRARKCPRELAQRRQVLTAGGRAVAVADTKIVLHGFVQCLFFWLAACRLTRRGYEFTMVAHASKSDFKEFLSRLRRKAAWPPPSPASSPFVCMDDKRSGKRQRQMQHPSYYASGYDQ 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50733.12322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2H8_9PHAE4.270e-12562.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G151_ECTSI9.180e-12563.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50733contigH-elongata_contig50733:720..3173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50733.12322.1mRNA_H-elongata_contig50733.12322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50733 720..3173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50733.12322.1 ID=prot_H-elongata_contig50733.12322.1|Name=mRNA_H-elongata_contig50733.12322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=296bp
MTRKRQLVKEVQEHLAIGEALYWESRVDLVQSGGKQGTPRRSRRGEARRR
YEDVAGLRRQHQKMAVNLPPMISTREGKLLAAEVFGDGVLKHLPSEDKGP
RVGHCSSGYVCGHPVSRGKEGNRWCQTPVRASLESKMACKHHSHRRRGAG
SPSKEQKRFMLLAVEFYDQKKVISWSRVVSHIRSRALPSELRQRRQVLAV
GGRALAVSDAKIVLHGFVQCTLFWLAACRLTRRGYRFSTMAHASKAEFKD
FLADLRATAAVPLLTQVSSPFVCVDDMSDGVRFYVSGYDQVCRVF*
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