prot_H-elongata_contig50590.12309.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50590.12309.1
Unique Nameprot_H-elongata_contig50590.12309.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: D8LN81_ECTSI (TBC1 domain family member 23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN81_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 2.200e-68
Identity = 115/154 (74.68%), Postives = 136/154 (88.31%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMS----------VEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSDHGNIPLDTSRSLFCESVR 144
            +VLL+Y+DP LA KLD+ADFVPELYATAWLITLFSRNL+++LV+RLWDVYLAVND SLVFFLL+ALLVRNR AI++          V+QAHMMPE +Q LT+TDK+DLEELIVQAR+ML+K+PE+FL+TVRSCCSD  N+PLDTSRSLFCESVR
Sbjct:   82 RVLLFYVDPGLARKLDEADFVPELYATAWLITLFSRNLTMELVVRLWDVYLAVNDPSLVFFLLAALLVRNRQAIIASDRTRNTILGVDQAHMMPEMIQSLTVTDKEDLEELIVQAREMLRKVPESFLQTVRSCCSDQCNVPLDTSRSLFCESVR 235          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A8K1C6A6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A6_PYTOL)

HSP 1 Score: 87.8 bits (216), Expect = 2.220e-17
Identity = 46/126 (36.51%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSD 126
            ++L+ Y DP L + LD     PELY T W +TLFSRNLS +LV++LWD ++   D  L+ F+  AL+  +RDAI   + A M+P+ +  +T   ++ ++ +  +A  +++  P++F R + S C D
Sbjct:  225 RLLMRYHDPMLCNYLDQHAMTPELYVTPWFMTLFSRNLSRELVLQLWDFFILHEDPYLLHFVAYALVEVHRDAIFQSDVA-MLPQVLSNITFETRERMDLVCQRALTLMETTPQSFKRDLYSVCYD 349          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7S2F8L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8L2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.190e-15
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   10 SLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSDHG 128
            SLA +L+     PELYATAW IT+ +R L++DL MR WDV LA  D++    L   LL   R A+++ + A  MPET+  + + D+   + L+  A       P + L ++R+ C+  G
Sbjct:    1 SLARQLEREHIGPELYATAWFITVLARGLTMDLCMRCWDVVLATGDAAFTCLLAMELLKTQRFALLTSD-ATQMPETLSLIKVEDEAATDALLRAALASYNATPGSLLDSLRTVCASTG 118          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7S3YFA6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFA6_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 5.460e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSAL 66
            ++LL Y DP+LA  L  A F PELYAT W++TLFSR L++ LV+RLWD  L  +D + VFFL+ AL
Sbjct:  105 ELLLAYHDPALARHLAGAGFTPELYATPWILTLFSRQLAVGLVLRLWDTLLGADDPNFVFFLMLAL 170          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7J7IID8_9RHOD (TBC1 domain family member 23 n=2 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IID8_9RHOD)

HSP 1 Score: 77.8 bits (190), Expect = 6.610e-14
Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    3 LLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRS 122
            LL++ DP +AS+L+      ++YATAWL+T+F+RNL+++ V+ LWDV L V D  L  F+    LV +R +++   +A  +PE +  +    +QD+E     AR++  + P   L   R+
Sbjct:  324 LLWFHDPEVASRLERYQLSTDMYATAWLVTVFARNLAMETVLVLWDVLLLVADPLLTIFVALVSLVSSRQSLLISNEA-TLPEQLLSIPFQSRQDMEAAWQWARKLAARTPNQALDRARA 442          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A2S2NMM9_SCHGA (TBC1 domain family member 23 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NMM9_SCHGA)

HSP 1 Score: 70.1 bits (170), Expect = 9.340e-12
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQA------HMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLR 118
            ++LL Y DP L + LD     PELY+ +W+ TLFS   SL++++ +WD+YLA  D   +FFL    ++  RD I S++         ++      L I D  D   L   A    K+ P +F++
Sbjct:  118 RILLLYHDPELCNLLDSLKLGPELYSDSWIQTLFSETCSLEVILNIWDLYLAKKDRFFIFFLALVFIINARDHIFSLKHQPKTQLIEILGNLPSQLAIDDINDFWSL---AEYYDKQTPSSFIK 238          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A6G0TDL0_APHGL (Rab-GAP TBC domain-containing protein n=10 Tax=Aphidinae TaxID=133076 RepID=A0A6G0TDL0_APHGL)

HSP 1 Score: 70.9 bits (172), Expect = 1.680e-11
Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQA------HMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTV 120
            ++LL Y DP L + LD     PELY+ +W+ TLFS   SL++++ +WD+YLA  D   +FFL    ++  RD I S++         ++      L I D  D   L   A    K+ P +F++ +
Sbjct:  159 RILLLYHDPELCNLLDSLKLGPELYSNSWIQTLFSETCSLEVILSIWDLYLAKKDRFFIFFLALVFIINARDHIFSLKHQPKTQLIEILGNLPSQLAIDDINDFWSL---AEYYDKQTPSSFIKDI 281          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A2S2R1L8_9HEMI (TBC1 domain family member 23 n=1 Tax=Sipha flava TaxID=143950 RepID=A0A2S2R1L8_9HEMI)

HSP 1 Score: 68.9 bits (167), Expect = 7.850e-11
Identity = 42/133 (31.58%), Postives = 64/133 (48.12%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMS------VEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSDH 127
            ++LL Y DP L + LD     PE Y+ +W+ TLF+   SL++++ +WD YLA  D   +FFL    ++  RD + S      ++   ++      L I D  D   L   A    KK P +F + V     DH
Sbjct:  159 RILLLYHDPELCNLLDSLKIGPEHYSESWIQTLFAETCSLEVILTIWDFYLAKKDRFFIFFLALVFIINARDHVFSLKHQPKIQLIEILGNLPAQLAIDDINDFWSL---AEYYDKKTPSSFKKDVAGYIFDH 288          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A813RFZ0_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813RFZ0_9BILA)

HSP 1 Score: 67.4 bits (163), Expect = 2.870e-10
Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 0
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSV---EQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSC 123
            ++LL Y DP L S LD     P+LYA AW+ +LF+ N SLD+ + LWD Y    D    FFL   LL+  ++ +  +   +++ ++    Q  +     DLE+    A       P++F +   SC
Sbjct:  560 RLLLLYHDPELCSFLDTKKVTPDLYAHAWIRSLFAANCSLDVTLDLWDGYFQQADQFFAFFLALVLLMFAKEHLFKMSGADKSEIIKFLSQAASNLSANDLEDFCSLANHYASNTPQSFRKEFYSC 685          
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7S1ER00_9RHOD (TBC1 domain family member 23 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER00_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 4.990e-10
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    3 LLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWD--VYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDL 98
            L++Y DP LAS  +      +L+AT+W++T FSRNLS++L + LWD  V  A +   L+FF L  LL+ NR+ +++V    ++PETV GL    +Q++
Sbjct:  180 LMHYHDPQLASHFELNHVSVDLFATSWILTAFSRNLSIELTLTLWDRMVLDAESPCGLLFFCLE-LLMSNRNQLLNVSHV-LLPETVNGLCPKTEQEV 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN81_ECTSI2.200e-6874.68TBC1 domain family member 23 n=2 Tax=Ectocarpus Ta... [more]
A0A8K1C6A6_PYTOL2.220e-1736.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2F8L2_9STRA5.190e-1536.97Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3YFA6_HETAK5.460e-1456.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7J7IID8_9RHOD6.610e-1435.00TBC1 domain family member 23 n=2 Tax=Cyanidiococcu... [more]
A0A2S2NMM9_SCHGA9.340e-1233.06TBC1 domain family member 23 (Fragment) n=1 Tax=Sc... [more]
A0A6G0TDL0_APHGL1.680e-1132.54Rab-GAP TBC domain-containing protein n=10 Tax=Aph... [more]
A0A2S2R1L8_9HEMI7.850e-1131.58TBC1 domain family member 23 n=1 Tax=Sipha flava T... [more]
A0A813RFZ0_9BILA2.870e-1031.75Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A7S1ER00_9RHOD4.990e-1040.82TBC1 domain family member 23 n=1 Tax=Timspurckia o... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 1..118
e-value: 3.9E-23
score: 83.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..48
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 3..75
e-value: 9.2E-14
score: 51.6
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..54
score: 14.828
IPR039755TBC1 domain family member 23PANTHERPTHR13297UNCHARACTERIZEDcoord: 3..126
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 3..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50590contigH-elongata_contig50590:138..3731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50590.12309.1mRNA_H-elongata_contig50590.12309.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50590 138..3731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50590.12309.1 ID=prot_H-elongata_contig50590.12309.1|Name=mRNA_H-elongata_contig50590.12309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVY
LAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEE
LIVQARQMLKKIPETFLRTVRSCCSDHGNIPLDTSRSLFCESVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR039755TBC1D23
IPR035969Rab-GTPase_TBC_sf