prot_H-elongata_contig50550.12303.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50550.12303.1
Unique Nameprot_H-elongata_contig50550.12303.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: D7G111_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G111_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 3.530e-54
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEEAKAEREA--RQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G PDAVDTFCPDVLNTGVKPSLLV+RAR+RFE KGG+VMEFTSIDGVSVRPDGV ++TSP +PPG +  A   A   +VTSRLVLDCMGNASP+V+Q+RWG KPEGVCLVVG
Sbjct:  143 GDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGGKPPASGAATGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVG 254          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 4.890e-50
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEE--AKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G P AVDTFCPDVLNTGVKPSLLV+RAR+RFE KGG+VMEFTSIDGVSVRPDGV ++TSP +PPG +  A       +VTSRLVLDCMGNASP+V+Q+RWG KPEGVCLVVG
Sbjct:  241 GDPGAVDTFCPDVLNTGVKPSLLVDRARRRFETKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGSKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVG 352          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A836CJX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.220e-39
Identity = 69/112 (61.61%), Postives = 82/112 (73.21%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDG--VVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G P+ VDTFCPDVLN GVKPS++V+RAR RFE  GG+VME  +I GVSVRP+G  V VAT P   P            VT+RLVLDCMGN SP+V+Q+RWG KP+G+CLVVG
Sbjct:   10 GDPNGVDTFCPDVLNLGVKPSVMVQRARARFEAAGGVVMEQAAISGVSVRPNGASVAVATGPADKP--------VTSNVTARLVLDCMGNGSPMVRQIRWGRKPDGMCLVVG 113          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A7S0KT21_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KT21_MICPS)

HSP 1 Score: 114 bits (286), Expect = 1.980e-27
Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = 0
Query:   12 DVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            D+LNTGVKPSLL++  R  FE KGG+V+E T+I G+SVRPDG  + TSP    G +         +T+RLV+DCMG ASP+V+Q RWG KP+GVCLVVG
Sbjct:  224 DILNTGVKPSLLLDAIRGNFEAKGGVVLEKTAISGISVRPDGAELDTSPLD--GGDGPGG-----ITARLVVDCMGFASPIVRQARWGQKPDGVCLVVG 315          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A5P8NA30_DUNSA (Lycopene cyclase family protein CruP n=2 Tax=Dunaliella TaxID=3044 RepID=A0A5P8NA30_DUNSA)

HSP 1 Score: 106 bits (265), Expect = 1.440e-24
Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G P + D +  DVLN GV+P LL+ R R + E  GG V E  ++ GV V P+G  ++           K    + +V SRLV+DCMG+ASP+VQQ+RWG KP+G+C+VVG
Sbjct:  221 GKPQSKDVWTRDVLNCGVRPDLLIARMRSKLEALGGKVYELAALQGVQVAPNGCTLSLKSMD------KGSETSMRVHSRLVIDCMGHASPIVQQIRWGKKPDGICIVVG 324          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A7S1UCL5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCL5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 7.350e-24
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G PD  + + P+VLN GV+PS+ V+RAR+ FE  GG+VME  +++ + V   G +V     A PGEE     + R+VT RLV+D MGNASP+ +Q+R G KP GVC VVG
Sbjct:  246 GDPDNQEVWVPEVLNMGVRPSVAVQRARENFEAAGGVVMEEVNVENIDVYGMGNIVNV---AVPGEE-----KPRRVTCRLVVDAMGNASPIARQIRGGEKPFGVCAVVG 347          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A383W046_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W046_TETOB)

HSP 1 Score: 104 bits (259), Expect = 8.860e-24
Identity = 58/120 (48.33%), Postives = 72/120 (60.00%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGV-VVATSPFAPPGEEAKAE---------REARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G     D +  DVLN GVKP +LV   RQ+ E  GG V E   + GV V  DGV +V TS   P G  A A          + A  +T+RL+LDCMG+ASP+V+Q+RWG KP+GVCLVVG
Sbjct:  157 GFHGGADVWTRDVLNLGVKPDMLVSLMRQKLEAAGGKVYEEVQLGGVEVLSDGVSLVVTSQTVPGGAAAAAGDAQSSGTRVQYASSITTRLLLDCMGHASPVVRQLRWGKKPDGVCLVVG 276          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A7S1XX57_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX57_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.720e-23
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G PD  + + P+VLN GV+PS+ V+RAR+ FE  GG+VME  +++ + V   G +V     A PGEE     + R+VT RLV+D MGNASP+ +Q+R G KP GVC VVG
Sbjct:  246 GDPDNQEVWVPEVLNMGVRPSVAVQRARENFEAAGGVVMEEVNVENIDVYGMGNIVNV---AVPGEE-----KPRRVTCRLVVDAMGNASPIARQIRGGEKPFGVCAVVG 347          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO)

HSP 1 Score: 103 bits (256), Expect = 2.260e-23
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    7 DTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVV------ATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            D +  DVLN GV+P  L+ + +QRFE  GG V+E T  +GV+V P+G+ +           A  G + ++      +T RL++DCMGN SP+V+Q RWG +P+GVCLVVG
Sbjct:  203 DVWTRDVLNLGVRPDKLIAKVKQRFEAAGGTVLELTGAEGVAVHPNGIFLDIPTNDKVQAQASNGSQQESAAGGAGITGRLLIDCMGNFSPIVRQARWGQRPDGVCLVVG 312          
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Match: A0A5J4Y8J5_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8J5_9CHLO)

HSP 1 Score: 102 bits (253), Expect = 5.600e-23
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    1 GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVRPDGVVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGNKPEGVCLVVG 110
            G   + + +  DVLN GVKP +L+ + R +FE  GG V E T   GV V PDGV +            + + +   VT +L++DCMGN SP+V+QVRWG+KP+GVC+VVG
Sbjct:  211 GFHGSQEVWTRDVLNLGVKPDMLIAKMRHKFEAAGGKVFERTVAQGVRVHPDGVAL------------QLQADQHDVTGQLIIDCMGNFSPIVRQVRWGHKPDGVCMVVG 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50550.12303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G111_ECTSI3.530e-5477.68Glycine/D-amino acid oxidase-like protein n=1 Tax=... [more]
A0A6H5L433_9PHAE4.890e-5075.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJX3_9STRA2.220e-3961.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0KT21_MICPS1.980e-2757.58Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A5P8NA30_DUNSA1.440e-2445.45Lycopene cyclase family protein CruP n=2 Tax=Dunal... [more]
A0A7S1UCL5_9STRA7.350e-2449.09Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A383W046_TETOB8.860e-2448.33Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S1XX57_9STRA1.720e-2349.09Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A8J9RAY4_9CHLO2.260e-2343.64Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A5J4Y8J5_9CHLO5.600e-2344.55Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32098FAMILY NOT NAMEDcoord: 7..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50550contigH-elongata_contig50550:1630..3653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50550.12303.1mRNA_H-elongata_contig50550.12303.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50550 1630..3655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50550.12303.1 ID=prot_H-elongata_contig50550.12303.1|Name=mRNA_H-elongata_contig50550.12303.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
GHPDAVDTFCPDVLNTGVKPSLLVERARQRFEGKGGIVMEFTSIDGVSVR
PDGVVVATSPFAPPGEEAKAEREARQVTSRLVLDCMGNASPLVQQVRWGN
KPEGVCLVVG
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