mRNA_H-elongata_contig115589.1230.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig115589.1230.1
Unique NamemRNA_H-elongata_contig115589.1230.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: D8LJD4_ECTSI (Glutamate--cysteine ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD4_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.700e-59
Identity = 102/132 (77.27%), Postives = 110/132 (83.33%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVA----PANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            HRLEGCTWHPEYG+WMVEATPR PF+GYAADLVRVERNMRLRRKRILSVL+ GEVAPTMTCFPLMGVGDFVA    P + +D+ E P+S         HVRGPVANSAYIPD +IN HPRFGALTKNIR RR
Sbjct:   59 HRLEGCTWHPEYGSWMVEATPRGPFSGYAADLVRVERNMRLRRKRILSVLRPGEVAPTMTCFPLMGVGDFVASSAVPPSASDSSERPSS-------RWHVRGPVANSAYIPDVVINPHPRFGALTKNIRARR 183
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A836CE91_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE91_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.120e-50
Identity = 91/128 (71.09%), Postives = 96/128 (75.00%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            HR EGCTWHPEYGAWMVEATPR PF+GYAADL+RVERNMRLRRKRILSVL   E+APT+TC P MGVGDFVAPA       GP            V GP+ANSA IPD IIN HPRFGALT NIR RR
Sbjct:   54 HRCEGCTWHPEYGAWMVEATPRMPFSGYAADLLRVERNMRLRRKRILSVLAPDEIAPTVTCLPTMGVGDFVAPA-------GP------------VPGPIANSAAIPDSIINPHPRFGALTANIRARR 162
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A7S3HC51_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC51_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.250e-38
Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H  EGCTWHPE+G WM+E+TP  P++ YA+DL+RVERNM LRR+R+LS+LK  E+AP +TCFPL+GV DF+       +P+                 P + S +IPD IIN HPRF ALT NIR RR
Sbjct:   87 HETEGCTWHPEFGGWMIESTPSRPYSKYASDLLRVERNMILRRRRLLSLLKPNEIAPYVTCFPLLGVADFIV------DPQP-------------FAAPHSKSDFIPDYIINPHPRFAALTTNIRSRR 195
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A7S2SFD3_9STRA (Glutamate--cysteine ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFD3_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.300e-38
Identity = 71/128 (55.47%), Postives = 88/128 (68.75%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H++EGC W PEYG+WM+E TPRSP+ GY+ DL+RVERNMRLRR R++  L   E+APT++ FPL+GVGDF  P         P +PR          GP+ANS  +PDE IN HPRFG LT+NIR RR
Sbjct:  106 HQVEGCAWMPEYGSWMLEGTPRSPYTGYSNDLLRVERNMRLRRARLMRNLADDEIAPTLSVFPLLGVGDFCYP---------PAAPR----------GPIANSESVPDECINPHPRFGTLTQNIRTRR 214
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A1V9Z600_9STRA (Glutamate--cysteine ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z600_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.050e-37
Identity = 73/128 (57.03%), Postives = 85/128 (66.41%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H  E C W PEYGAWMVEATPR P+ G+ +DL RVE++MRLRR R+LSVLK  E+APT+T FPL+GVGD+VAP                     +  GP+ANS YI D IIN HPRFG LT NIR RR
Sbjct:   90 HAEEECNWVPEYGAWMVEATPRVPYGGFTSDLRRVEQSMRLRRARLLSVLKPNEIAPTVTAFPLLGVGDYVAPP-------------------VNRVGPIANSLYIDDRIINPHPRFGTLTANIRTRR 198
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A485KIR0_9STRA (Glutamate--cysteine ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIR0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 5.490e-37
Identity = 73/128 (57.03%), Postives = 82/128 (64.06%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H  E C W PEYGAWMVEATPR P+ G+++DL RVE NMRLRR R+LSVLK  E+ PT+T FPL+GVGDF  P  T                    RGP+A S YI D IIN HPRFG LT NIR RR
Sbjct:   90 HDDEECNWVPEYGAWMVEATPRVPYGGFSSDLRRVEPNMRLRRARLLSVLKENEICPTVTAFPLLGVGDFTVPHTTP-------------------RGPIAKSEYISDGIINPHPRFGTLTANIRKRR 198
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A835ZCQ8_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 9.640e-37
Identity = 74/129 (57.36%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGD-FVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            +R EGC WHPEYGAWM+E TPR+PF G+  DL+RVER+MRLRR RIL+ L   E+APT+T FP  G GD F AP         P  P  C        GPVA SAY+PD +IN HPRF ALT NIR RR
Sbjct:  111 YRAEGCAWHPEYGAWMLEGTPRAPFRGFTTDLLRVERSMRLRRARILAALAPDEIAPTVTAFPRFGAGDDFCAP---------PALP--CP------GGPVAESAYVPDAVINPHPRFAALTANIRARR 222
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A6G0WEE2_9STRA (Glutamate--cysteine ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WEE2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.450e-36
Identity = 73/128 (57.03%), Postives = 84/128 (65.62%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H  EGC W PEYGAWMVEATP  P+ G+++DL RVE +MRLRR R+LSVLK  E+ PT+T FPL+GVGDF  P         P+ P           GP+A SAYI D IIN HPRFG LT NIR RR
Sbjct:  103 HIEEGCNWVPEYGAWMVEATPSMPYGGFSSDLRRVEPSMRLRRARLLSVLKDNEICPTVTAFPLLGVGDFTVP---------PSLPN----------GPIAKSAYISDMIINPHPRFGTLTANIRKRR 211
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A6A5ARX6_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ARX6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.110e-36
Identity = 70/129 (54.26%), Postives = 82/129 (63.57%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVG-DFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H  EGC W PEYGAWMVEATP +P+ G+++DL RVE +MRLRR R+L VL   E+ PT+T FPL+GVG DF  P   +                   RGP+A S YI D IIN HPRFGALT NIR RR
Sbjct:   90 HVEEGCNWVPEYGAWMVEATPSTPYGGFSSDLRRVEPSMRLRRARLLCVLHDNEICPTVTSFPLLGVGNDFTVPPTFS-------------------RGPIAASEYISDAIINPHPRFGALTANIRKRR 199
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BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Match: A0A1V9ZIF2_9STRA (Glutamate--cysteine ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZIF2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 5.610e-36
Identity = 70/128 (54.69%), Postives = 82/128 (64.06%), Query Frame = 1 
Query:    1 HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVLKAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPVANSAYIPDEIINSHPRFGALTKNIRVRR 384
            H  E C W PEYGAWMVEATPR P+  + +DL RVE++MRLRR R+LS LK  E+APT+T FPL+GVGD++ P                       RGP+ANS YI D IIN HPRFG LT NIR RR
Sbjct:   90 HPEEECNWVPEYGAWMVEATPRVPYGNFTSDLRRVEQSMRLRRARLLSALKKNEIAPTVTAFPLLGVGDYITPPVVK-------------------RGPIANSLYISDSIINPHPRFGTLTANIRKRR 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115589.1230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJD4_ECTSI1.700e-5977.27Glutamate--cysteine ligase n=1 Tax=Ectocarpus sili... [more]
A0A836CE91_9STRA4.120e-5071.09Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A7S3HC51_9STRA2.250e-3852.34Glutamate--cysteine ligase (Fragment) n=1 Tax=Spum... [more]
A0A7S2SFD3_9STRA2.300e-3855.47Glutamate--cysteine ligase n=1 Tax=Rhizochromulina... [more]
A0A1V9Z600_9STRA1.050e-3757.03Glutamate--cysteine ligase n=3 Tax=Saprolegniaceae... [more]
A0A485KIR0_9STRA5.490e-3757.03Glutamate--cysteine ligase n=1 Tax=Aphanomyces ste... [more]
A0A835ZCQ8_9STRA9.640e-3757.36Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A6G0WEE2_9STRA2.450e-3657.03Glutamate--cysteine ligase n=1 Tax=Aphanomyces eut... [more]
A0A6A5ARX6_9STRA3.110e-3654.26Glutamate--cysteine ligase (Fragment) n=1 Tax=Apha... [more]
A0A1V9ZIF2_9STRA5.610e-3654.69Glutamate--cysteine ligase n=1 Tax=Thraustotheca c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115589contigH-elongata_contig115589:229..1505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.1
Seed ortholog evalue1e-50
Seed eggNOG ortholog2880.D8LJD4
Preferred nameGCLC
KEGG rclassRC00064,RC00090
KEGG koko:K11204
KEGG ReactionR00894,R10993
KEGG Pathwayko00270,ko00480,ko01100,ko04212,ko04216,map00270,map00480,map01100,map04212,map04216
KEGG ModuleM00118
GOsGO:0000096,GO:0000166,GO:0000287,GO:0000302,GO:0000303,GO:0000305,GO:0000902,GO:0000904,GO:0001101,GO:0001678,GO:0002009,GO:0002165,GO:0003008,GO:0003013,GO:0003018,GO:0003254,GO:0003674,GO:0003824,GO:0004357,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006082,GO:0006355,GO:0006518,GO:0006520,GO:0006534,GO:0006536,GO:0006575,GO:0006732,GO:0006749,GO:0006750,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006915,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007568,GO:0007584,GO:0008015,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009058,GO:0009064,GO:0009069,GO:0009266,GO:0009408,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010941,GO:0012501,GO:0014070,GO:0014823,GO:0015711,GO:0015833,GO:0016043,GO:0016595,GO:0016597,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0017109,GO:0019184,GO:0019219,GO:0019222,GO:0019725,GO:0019748,GO:0019752,GO:0019852,GO:0022008,GO:0023051,GO:0023057,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030435,GO:0030554,GO:0030587,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031406,GO:0031667,GO:0032268,GO:0032269,GO:0032270,GO:0032354,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033500,GO:0034097,GO:0034284,GO:0034635,GO:0034641,GO:0034698,GO:0035107,GO:0035114,GO:0035120,GO:0035150,GO:0035220,GO:0035239,GO:0035295,GO:0035690,GO:0035728,GO:0035729,GO:0036094,GO:0042176,GO:0042221,GO:0042391,GO:0042398,GO:0042493,GO:0042542,GO:0042592,GO:0042593,GO:0042886,GO:0042939,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043523,GO:0043524,GO:0043531,GO:0043603,GO:0043604,GO:0043648,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0044752,GO:0045454,GO:0045732,GO:0045862,GO:0045892,GO:0045934,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046872,GO:0046937,GO:0046938,GO:0046982,GO:0046983,GO:0048037,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050662,GO:0050789,GO:0050794,GO:0050801,GO:0050865,GO:0050866,GO:0050880,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051409,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051881,GO:0051900,GO:0055082,GO:0060255,GO:0060429,GO:0060548,GO:0060562,GO:0061136,GO:0061564,GO:0061687,GO:0065007,GO:0065008,GO:0070555,GO:0070848,GO:0070887,GO:0071214,GO:0071229,GO:0071230,GO:0071241,GO:0071248,GO:0071260,GO:0071276,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071363,GO:0071371,GO:0071372,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0071840,GO:0072337,GO:0072348,GO:0080090,GO:0090066,GO:0090702,GO:0097066,GO:0097067,GO:0097068,GO:0097069,GO:0097159,GO:0097237,GO:0097367,GO:0097501,GO:0098754,GO:0098849,GO:0099120,GO:0104004,GO:0120036,GO:0120039,GO:1901214,GO:1901215,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902494,GO:1902679,GO:1903050,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903364,GO:1903506,GO:1903507,GO:1904386,GO:1904387,GO:1990170,GO:1990748,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000489,GO:2000490,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.glutamate-cysteine ligase activity
EggNOG OGsKOG3754@1,KOG3754@2759
EC6.3.2.2
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size384
Cds size384
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929669.7690673-CDS-H-elongata_contig115589:228..5101622929669.7690673-CDS-H-elongata_contig115589:228..510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115589 229..510 -
1691679113.1838546-CDS-H-elongata_contig115589:228..5101691679113.1838546-CDS-H-elongata_contig115589:228..510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115589 229..510 -
1622929669.781033-CDS-H-elongata_contig115589:1403..15051622929669.781033-CDS-H-elongata_contig115589:1403..1505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115589 1404..1505 -
1691679113.194256-CDS-H-elongata_contig115589:1403..15051691679113.194256-CDS-H-elongata_contig115589:1403..1505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig115589 1404..1505 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115589.1230.1prot_H-elongata_contig115589.1230.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig115589 229..1505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig115589.1230.1

>prot_H-elongata_contig115589.1230.1 ID=prot_H-elongata_contig115589.1230.1|Name=mRNA_H-elongata_contig115589.1230.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
HRLEGCTWHPEYGAWMVEATPRSPFAGYAADLVRVERNMRLRRKRILSVL
KAGEVAPTMTCFPLMGVGDFVAPANTADNPEGPTSPRRCSPKSCHVRGPV
ANSAYIPDEIINSHPRFGALTKNIRVRR
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mRNA from alignment at H-elongata_contig115589:229..1505-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig115589.1230.1 ID=mRNA_H-elongata_contig115589.1230.1|Name=mRNA_H-elongata_contig115589.1230.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1277bp|location=Sequence derived from alignment at H-elongata_contig115589:229..1505- (Himanthalia elongata Himel1 dioecious)
CACCGGCTGGAAGGCTGCACCTGGCACCCGGAGTATGGGGCGTGGATGGT
GGAAGCCACTCCCAGGAGTCCCTTCGCGGGGTACGCGGCCGACCTAGTGC
GAGTGAGTGGATATAAACCTCTAGGCTTTATAAAGTTTTGAAGTACAACA
AACAGTCGGCAGCCGAAAGGAAATGAACAGCGAAGTAGGGTAATGTGCGA
GTTTTTTGGGGTGTGTGGTGAGGGGAGGCGCCGTTGAAGTGATGATGCTT
GACAATCCCCGCTCCCTTTCCGTCTTCCAGTGGCCAACCTAATCTTCTCC
ACACCGTTCCTTTTTTTCCCACCCGATTACTACTATCGTCAGCCAGGTCA
TCGAAAATTCGGTATATTTTTGCATCACGCCATTTTTGGGATGCGTATAG
CCTATGTCCGTTTCGATACCATAGGCGTTGAGACATTAGTATACCCCAGC
CGGGGATGAGTAACAGGTGTCTCCGATCACTTTCTTTCAAAATAACCGCT
GATATCGGCGCTGTTTGTTTGAAATGACCTCACCAAATAGGTTTCCGGAA
ATCCGTGCGTGTTACCTATAAATGTGTTGGCACTGTCTTTGTGAGGGATG
GACAAATCATTGAGGGATTGCCGCCCGCCGAGTGTATTCTTGAAACCGTT
ACCTATACTCATGCCCCATATTCATGCGGGCCCGCCGCAGCCCCCCCCCC
CCCTCCGAGAGATAAAGGGAAGACACGACTCGGCCCTTTGCCCCCGGAGA
GTTCTACTGTGTACGGCGGCGTTAATGGTTAAACGCGGTGCGAGTGTTTT
AGTAGAATCAGCGCCGTTTGCTCATCGTAGGCAAAACGACAATAAAAAAA
AGAATCTCGAGAGAAACAAACACGACCAGTTACACTCTGCACAACCCCTC
TAGCTTTACCAATAACCGTCCACCTATTCCCCACACACACCCTTCGACTC
GTTTGTCTCATTTGTCTTCGTGGCGTTGTTTTTTTCTCGAAAAAGGTTGA
GCGAAACATGCGCCTCCGCCGAAAGCGCATCCTAAGCGTACTCAAAGCGG
GCGAGGTGGCGCCGACCATGACGTGCTTCCCACTCATGGGGGTTGGAGAC
TTCGTGGCCCCCGCTAATACTGCGGACAACCCCGAGGGGCCGACGTCTCC
CCGCCGGTGCTCCCCGAAGTCGTGTCATGTACGCGGCCCCGTGGCGAACT
CCGCCTATATCCCAGACGAGATCATCAACTCGCACCCGCGCTTCGGAGCC
CTCACCAAAAACATCAGGGTGAGGCGT
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Coding sequence (CDS) from alignment at H-elongata_contig115589:229..1505-

>mRNA_H-elongata_contig115589.1230.1 ID=mRNA_H-elongata_contig115589.1230.1|Name=mRNA_H-elongata_contig115589.1230.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at H-elongata_contig115589:229..1505- (Himanthalia elongata Himel1 dioecious)
CACCGGCTGGAAGGCTGCACCTGGCACCCGGAGTATGGGGCGTGGATGGT
GGAAGCCACTCCCAGGAGTCCCTTCGCGGGGTACGCGGCCGACCTAGTGC
GACACCGGCTGGAAGGCTGCACCTGGCACCCGGAGTATGGGGCGTGGATG
GTGGAAGCCACTCCCAGGAGTCCCTTCGCGGGGTACGCGGCCGACCTAGT
GCGAGTTGAGCGAAACATGCGCCTCCGCCGAAAGCGCATCCTAAGCGTAC
TCAAAGCGGGCGAGGTGGCGCCGACCATGACGTGCTTCCCACTCATGGGG
GTTGGAGACTTCGTGGCCCCCGCTAATACTGCGGACAACCCCGAGGGGCC
GACGTCTCCCCGCCGGTGCTCCCCGAAGTCGTGTCATGTACGCGGCCCCG
TGGCGAACTCCGCCTATATCCCAGACGAGATCATCAACTCGCACCCGCGC
TTCGGAGCCCTCACCAAAAACATCAGGGTGAGGCGTGTTGAGCGAAACAT
GCGCCTCCGCCGAAAGCGCATCCTAAGCGTACTCAAAGCGGGCGAGGTGG
CGCCGACCATGACGTGCTTCCCACTCATGGGGGTTGGAGACTTCGTGGCC
CCCGCTAATACTGCGGACAACCCCGAGGGGCCGACGTCTCCCCGCCGGTG
CTCCCCGAAGTCGTGTCATGTACGCGGCCCCGTGGCGAACTCCGCCTATA
TCCCAGACGAGATCATCAACTCGCACCCGCGCTTCGGAGCCCTCACCAAA
AACATCAGGGTGAGGCGT
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