prot_H-elongata_contig50527.12298.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50527.12298.1
Unique Nameprot_H-elongata_contig50527.12298.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length221
Homology
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: D7G8Q2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q2_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 1.810e-102
Identity = 150/211 (71.09%), Postives = 176/211 (83.41%), Query Frame = 0
Query:   11 RLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGVISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFEKSFF 221
            RLPQVVMCTAQ LLQRFFYRK LT  DAF++AM CMLLA KI+E  R  + VVLVFHRMFERRIG+ P+ VI P S++ L++EM RVELHVL+ELGF FYN M+HPHK + YY+  LELD++G V QRAWNY+NDSLRTDL +RFRSE+IACAAIYMA RSL IKLPDNPPWW++FNA ++ +GEICNTILALY R K+AFLEPL + S F
Sbjct:  106 RLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIVIPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVAFLEPLCDNSVF 316          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: A0A835YUR3_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR3_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.840e-79
Identity = 124/222 (55.86%), Postives = 165/222 (74.32%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDER--QRSSQDVVLVFHRMFERRIGMQPSGVISPGSMKA-LQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFEKSFF 221
            ++ A +  RLPQVVMCT QTLLQRF+YRKSLT  DAF++AM C+LLA K++E       +DVV+VFHRM+ RR G+    +   G++ A L+ EM RVE +VL++LGF FYN M+HPHK + YY+  L  +++    QR W+YLND+LRTDLC+R+R+E+IACAAIYMA R+L ++LP +PPWW +FNA L  IG+ICN ILALYK+ K+ +LEPL   S F
Sbjct:   40 IQEAGILLRLPQVVMCTGQTLLQRFYYRKSLTKFDAFSVAMGCVLLAAKLEEAIGHTRVRDVVMVFHRMYLRRRGLPLEFLELGGTVYAELKTEMIRVERYVLKDLGFGFYNIMDHPHKFILYYVRVLGWELEAT--QRVWSYLNDALRTDLCLRYRAEVIACAAIYMAARALRLRLPQSPPWWRLFNAELPEIGQICNAILALYKKPKVVWLEPLHSGSVF 259          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: A0A7S4D4U7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4U7_HETAK)

HSP 1 Score: 223 bits (568), Expect = 1.840e-68
Identity = 109/221 (49.32%), Postives = 154/221 (69.68%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGVISPGSMKALQ--EEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFEKSFF 221
            V+ A +  RLPQVVM T Q LLQRFFYR+SL   DAFT+AM C+ L+ K++E+ +  ++++ VFH + + R G +P   +  G+   +Q   E+ ++E HVL+ELGFSFYN M+HPHK + YY++ L  D    + QRAW+Y+NDSLRTDLC+R  + +IACAAIYMA R L + LP +PPWW +F+A L+ +  IC+ ILALY+  K  ++EPL E + F
Sbjct:   72 VQEAGVLLRLPQVVMATGQNLLQRFFYRRSLKRFDAFTVAMGCLFLSCKVEEKPKRLREILFVFHHISQVRRG-EPITPLELGAQTYMQWKSELIKMERHVLKELGFSFYNIMDHPHKFILYYIKVL--DGSSALAQRAWSYVNDSLRTDLCLRHGAAVIACAAIYMAARVLRVPLPRSPPWWELFSAQLRDVAAICDAILALYEMEKTPWMEPLSEANVF 289          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: W7U1X8_9STRA (Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1X8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.480e-60
Identity = 109/240 (45.42%), Postives = 154/240 (64.17%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTT-------------------IDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGV-ISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKR-------SKIAFLEPL 215
            ++ A +  R PQVVM TAQTL  RFFYR++LT+                    DAFT+AM C+ LA+K++E+ R+ +DV+ VFH M  RR G+ PS + ++      L+E +  +E +VL+ELGF FY+ M+HPHK + YY++   LD    + QRAWNYLNDSLR D CVRFR+E+IAC A+YMA R L +KLPD+PPW+ +F A L+ +  + N IL+LY+        + + +LEPL
Sbjct:   79 IQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIK--TLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: W2R3U0_PHYPN (Uncharacterized protein (Fragment) n=11 Tax=Phytophthora TaxID=4783 RepID=W2R3U0_PHYPN)

HSP 1 Score: 197 bits (501), Expect = 3.420e-58
Identity = 103/221 (46.61%), Postives = 145/221 (65.61%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGV------ISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFE 217
            ++ A +  RLPQVVM TAQTLLQRF+YRKSL   DAF +A++C+ LA K++E+ +  +DVV VF+ MF RR   Q S V      +   +    +  +  VE  VL +LGFS Y+   HPHK V YY++ L  D    + Q+AW Y+NDSLRTDLCVR+++++IACAAI++A R   + LP+NPPW+L+F+     +  +   I+ LYK+ KI +LEPL E
Sbjct:   43 IQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRR-KWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVL--DGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEKIQWLEPLTE 260          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: A0A0P1B0R9_PLAHL (Ania-6a type cyclin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R9_PLAHL)

HSP 1 Score: 196 bits (499), Expect = 7.170e-58
Identity = 99/220 (45.00%), Postives = 144/220 (65.45%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERR-----IGMQPSGVISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFE 217
            ++ A +  RLPQVVM TAQTLLQRFFYRKSL   DAF +A++C+ LA K++E+ +  +DVV VF+ M+ RR        Q    +   +    +  +  VE  VL +LGFS Y+   HPHK V YY++ L  D +  + Q+AW Y+NDSLRTDLCVR++++ IACAAI++A R L++ LP+NPPW+ +F+     +  +   I+ LYK+ K+ ++EPL E
Sbjct:   43 IQEAGVLLRLPQVVMATAQTLLQRFFYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRRKWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVL--DGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQEKLQWVEPLTE 260          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: A0A3F2S4S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4S2_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.450e-56
Identity = 97/220 (44.09%), Postives = 140/220 (63.64%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERR-----IGMQPSGVISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFE 217
            ++ A +  RLPQVVM TAQTL QRF+YRKSL   DAF +A++C+ LA K++ER +  +DV+ VF+ M  RR     +  Q    +   +    +  +  VE  VL ++GFS YN   HPHK V YY++ L  D    + QRAW Y+NDSLR+DLCVR+ +++IAC+AI++A R   + LP+NPPW+ +F    + +  +   I+ LYK+ KI +LEPL E
Sbjct:   42 IQEAGVLLRLPQVVMATAQTLFQRFYYRKSLRQFDAFRVAISCLFLAAKVEERPKRIKDVLTVFYAMLRRRKWKRTVVSQQLVDLDGATYSQWRMWLIMVERQVLIDMGFSVYNVTEHPHKYVLYYVKVL--DGSSQLAQRAWGYINDSLRSDLCVRYSAQVIACSAIFLASRYQGVALPENPPWYSLFGVNKQQLYAVSVAIMELYKQEKIEWLEPLTE 259          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: F0YGC1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC1_AURAN)

HSP 1 Score: 188 bits (477), Expect = 1.970e-56
Identity = 96/208 (46.15%), Postives = 136/208 (65.38%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGVISPGSMK--ALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNP--PWWLVFNAGLKSIGEICNTILALYKR 206
            ++ A +  RLPQVVMCT Q + QRF+YR SL   DAF  AM C  LA KI+E+ +  ++ ++VFH  F  R+  + S  +  G ++    + E+ +VE H+L+ELGFSFY  ++H HK + +Y++ L+ D  G + Q AW+YLND LRTD  +R+RSE++ACAAIYMA R L+ KLPD+P  PWW VF  G   +  +   +LALY R
Sbjct:   34 IQEAGILLRLPQVVMCTGQNIFQRFYYRVSLKRFDAFLSAMGCFFLACKIEEKPKRLRECLMVFH--FVYRVRTKSSATLELGGVRYNGWKHELVKVERHILKELGFSFY-IIDHSHKFILFYVKLLDCD--GELAQEAWSYLNDCLRTDAALRYRSEVLACAAIYMAARRLQHKLPDDPAAPWWEVFRVGKADLDAVVAAVLALYVR 236          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: K3WRL9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL9_GLOUD)

HSP 1 Score: 194 bits (493), Expect = 2.590e-56
Identity = 95/220 (43.18%), Postives = 147/220 (66.82%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGV-----ISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFE 217
            ++ A +  RLPQVVM TAQT+L RF+YRKSL   DAF +A AC+ LA K++ER +  +DV+ VF+ ++ RR   + S       +  G+    ++ +  VE  VL +LGFS YN M HPHK + YY++ ++   K  + Q+AW ++NDSLR DLCVR+ +E+IACAAI++A R L++ LP+NPPW+ +F+   +++ ++   I+ LY R ++ +L+PL E
Sbjct:   51 IQEAGVLLRLPQVVMVTAQTMLHRFYYRKSLRDFDAFRVAFACVFLAAKVEERPKRIKDVLSVFYALYRRRKAGKTSVKQQLLDLESGTYCLWRDWLIMVERQVLIDLGFSVYNVMEHPHKYILYYIKIIDGSQK--LAQKAWGFINDSLRIDLCVRYEAEVIACAAIFLASRFLQVHLPENPPWYSLFDVEKQALYDVSIEIMGLYSRERVQWLDPLTE 268          
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Match: A0A3M6VK16_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK16_9STRA)

HSP 1 Score: 189 bits (481), Expect = 9.410e-56
Identity = 96/220 (43.64%), Postives = 142/220 (64.55%), Query Frame = 0
Query:    3 VKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLATKIDERQRSSQDVVLVFHRMFERRIGMQPSGV-----ISPGSMKALQEEMFRVELHVLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTDLCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTILALYKRSKIAFLEPLFE 217
            ++ A +  RLPQVVM TAQTLL RF+YRKSL   DAF +A++C+ LA K++E+ +   +V+ VF+ MF RR     +       ++  +    +  +  VE  VL +LGFS YN   HPHK V YY++ L  +    + Q+AW Y+NDSLRTDLCVRF++++IACAAI++A R  E+ LP++PPW+ +F+     +  +   I+ LYK+ K+ +LEPL E
Sbjct:   43 IQEAGILLRLPQVVMATAQTLLHRFYYRKSLHQFDAFRVALSCLFLAAKVEEKPKRIHEVIGVFYAMFRRRKWKNTTVTQKLMDLNGPTFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVL--NGSSQLAQQAWGYINDSLRTDLCVRFKAQVIACAAIFLASRFQEVALPEDPPWYALFDVEKTQLYAVSIVIMELYKQEKLEWLEPLTE 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50527.12298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q2_ECTSI1.810e-10271.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUR3_9STRA2.840e-7955.86Cyclin-like protein (Fragment) n=1 Tax=Tribonema m... [more]
A0A7S4D4U7_HETAK1.840e-6849.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7U1X8_9STRA1.480e-6045.42Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=... [more]
W2R3U0_PHYPN3.420e-5846.61Uncharacterized protein (Fragment) n=11 Tax=Phytop... [more]
A0A0P1B0R9_PLAHL7.170e-5845.00Ania-6a type cyclin n=1 Tax=Plasmopara halstedii T... [more]
A0A3F2S4S2_9STRA1.450e-5644.09Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
F0YGC1_AURAN1.970e-5646.15Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
K3WRL9_GLOUD2.590e-5643.18Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3M6VK16_9STRA9.410e-5643.64Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 1..103
e-value: 0.0049
score: 26.1
coord: 118..205
e-value: 5.6E-4
score: 29.2
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 10..108
e-value: 2.4E-9
score: 37.0
NoneNo IPR availablePIRSFPIRSF036580Cyclin_Lcoord: 2..218
e-value: 3.8E-72
score: 239.9
NoneNo IPR availableGENE3D1.10.472.10coord: 113..213
e-value: 6.8E-28
score: 99.2
NoneNo IPR availableGENE3D1.10.472.10coord: 3..109
e-value: 7.5E-24
score: 86.1
NoneNo IPR availablePANTHERPTHR10026:SF13CYCLIN L1A-RELATEDcoord: 8..208
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 8..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 7..109
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 114..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50527contigH-elongata_contig50527:541..1203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50527.12298.1mRNA_H-elongata_contig50527.12298.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50527 541..1203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50527.12298.1 ID=prot_H-elongata_contig50527.12298.1|Name=mRNA_H-elongata_contig50527.12298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp
MDVKSAFMFFRLPQVVMCTAQTLLQRFFYRKSLTTIDAFTLAMACMLLAT
KIDERQRSSQDVVLVFHRMFERRIGMQPSGVISPGSMKALQEEMFRVELH
VLRELGFSFYNTMNHPHKIVFYYMEYLELDVKGGVLQRAWNYLNDSLRTD
LCVRFRSEIIACAAIYMACRSLEIKLPDNPPWWLVFNAGLKSIGEICNTI
LALYKRSKIAFLEPLFEKSFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR036915Cyclin-like_sf