prot_H-elongata_contig50516.12296.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig50516.12296.1
Unique Name	prot_H-elongata_contig50516.12296.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	156

Homology

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 5.050e-75
Identity = 121/155 (78.06%), Postives = 136/155 (87.74%), Query Frame = 0

Query:    1 MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV 155
            MMG  V P+DVFLAFTVDQG NVVNAC+NL VEVLKCNAH LNSVTMWALG+NGS ++T ENP MEK MKRLAAVVGV+SHSAVNNDELK+IQ LQEEF  +YEL+RRNDTRW +QHAMMVRLLKLK +IVEYFR ++ N RKLS+REW +TNEV
Sbjct:   11 MMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGS-IRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEV 164

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.560e-72
Identity = 121/155 (78.06%), Postives = 136/155 (87.74%), Query Frame = 0

Query:    1 MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV 155
            MMG  V P+DVFLAFTVDQG NVVNAC+NL VEVLKCNAH LNSVTMWALG+NGS ++T ENP MEK MKRLAAVVGV+SHSAVNNDELK+IQ LQEEF  +YEL+RRNDTRW +QHAMMVRLLKLK +IVEYFR ++ N RKLS+REW +TNEV
Sbjct:  339 MMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGS-IRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEV 492

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.860e-51
Identity = 93/154 (60.39%), Postives = 116/154 (75.32%), Query Frame = 0

Query:    2 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV 155
            MG +V P DVFLAFTVDQG N++NAC  LGV V++CN H LN+  +WALG+ G   K   NP M   MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+RRNDTRWT+Q  MM R+L LK  I EYF+++  N+RKL+  EW ITNEV
Sbjct:  352 MGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG---KGRLNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEV 502

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 6.840e-51
Identity = 92/154 (59.74%), Postives = 115/154 (74.68%), Query Frame = 0

Query:    2 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV 155
            MG +V P DVFLAFTVDQG N++NAC  LGV V++CN H LN+  +WALG+ G   K   NP M   MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+R NDTRWT+Q  MM R+L LK  I EYF+++  N+RKL+  EW ITNEV
Sbjct:  157 MGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG---KGRLNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEV 307

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 9.440e-51
Identity = 94/154 (61.04%), Postives = 113/154 (73.38%), Query Frame = 0

Query:    2 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV 155
            MG  V P+DVFLAFTVDQG NVVNACK LGV V+KCN H +N+  +WALG+ G+  +   N  M   MK+LAA+VGV+SHSAVNND+LK +Q L+E+   VY+L+RRNDTRWT+Q  MM RLL LK  I EYFR    N RKL+  EW ITNEV
Sbjct:  350 MGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR---NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEV 500

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.710e-48
Identity = 94/162 (58.02%), Postives = 116/162 (71.60%), Query Frame = 0

Query:    1 MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV 155
            +MG +V  +DVFLAFTVDQG NVVNAC  LGV V++CN H +NS  +WALG+ GS V TC+N    K MK+LAA+VGV+SHSAVNND LK +Q L+ +  ++YE +RRNDTRWT+Q  MM RLL LK  I EYFRR       +   KRKL+  EW +TNEV
Sbjct:  160 LMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGS-VTTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEV 316

[Close]

BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 3.460e-48
Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 0

Query:    1 MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV 155
            +MG +V  +DVFLAFTVDQG NVVNAC  LGV V++CN H +NS  +WALG+ GS+  TC+N    K MK+LAA+VGV+SHSAVNND LK +Q L+ +  ++YE +RRNDTRWT+Q  MM RLL LK  I EYFRR       +   KRKL+  EW +TNEV
Sbjct:  160 LMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT-TCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEV 316

[Close]

BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.590e-46
Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 0

Query:    2 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRW-TTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV 155
            MG +V P + FLAFTVDQG N++NAC  L V V++CN H +N+  +WALG+   + K  +NP M   MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+RRNDTRW T+Q  MM R L LK  I E+F+++  N RKL+  EW I NEV
Sbjct:    1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGI---AAKGRKNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEV 152

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BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.120e-43
Identity = 92/160 (57.50%), Postives = 112/160 (70.00%), Query Frame = 0

Query:    2 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR------HDGNKRKLSTREWRITNEV 155
            MG +V P DVFLAFTVDQG NVVNAC  LGV+V+KCN H +NS  +WALG+ GS+  TC N  M   MK+LAA+VGV+S SAVNN  LK +Q L+ +  ++YEL+RRNDT   +Q  MM RLL LK  I EYFRR      +   KRKLS+ EW +TNEV
Sbjct:   16 MGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSAT-TCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEV 170

[Close]

BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.970e-41
Identity = 86/162 (53.09%), Postives = 107/162 (66.05%), Query Frame = 0

Query:    1 MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV 155
            ++G +V P DVFL FTVDQG N+VNA   LGV V++CN H +NS  +WALG+ G + +TC+N  M   MK+LAA VGV+SHSAVNND LK IQ L+ +  +VYE        WT+Q  MMVRLL L  +I EYFRR       H   KRKL+  EW +TNEV
Sbjct:  157 LIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCA-RTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEV 309

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot

BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
A0A6H5KAN7_9PHAE	5.050e-75	78.06	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KJ52_9PHAE	2.560e-72	78.06	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JGG8_9PHAE	3.860e-51	60.39	Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec...	[more]
A0A6H5JTB8_9PHAE	6.840e-51	59.74	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JRT6_9PHAE	9.440e-51	61.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZU3_9PHAE	1.710e-48	58.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQI6_9PHAE	3.460e-48	57.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAS2_9PHAE	1.590e-46	55.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDJ6_9PHAE	3.120e-43	57.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXV5_9PHAE	3.970e-41	53.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig50516	contig	H-elongata_contig50516:1282..1932 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig50516.12296.1	mRNA_H-elongata_contig50516.12296.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig50516 789..2570 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig50516.12296.1 ID=prot_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWAL
GVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFL
QVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWR
ITNEV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf