prot_H-elongata_contig50485.12292.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50485.12292.1
Unique Nameprot_H-elongata_contig50485.12292.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length273
Homology
BLAST of mRNA_H-elongata_contig50485.12292.1 vs. uniprot
Match: D8LUA6_ECTSI (WW domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA6_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 5.850e-56
Identity = 156/325 (48.00%), Postives = 187/325 (57.54%), Query Frame = 0
Query:    1 IHRRTRLSLDQERRRLDRLPRSQRLRQVKGHPLGGMTLLELEDRHLLDVGIGKIAKRLASMRGGG-------VRQMDTDLLRRSARLFRRAQQERDARYAL-----------------KFEQESIKTPLHGCGAFGINTRATSARKG-------SRRPASASREH--YKPASYSFSLD---SAEQNRLASA---NTSKPGRTDKRVYPTDGAPANVGLYSGGGDRCSLKQRRPMSAKPALTCGSGWKPGRSRDCRRDGEKS---YFGESRRRHLQEAGYIG------------QGKLDVVSIGSDLSDLSSHDIVEYTDEEESPF 271
            + RRTRLSLD+ERRRLDR+PRSQRL QV+GHPLGGMTLL+LE+RHLLDVGIG++ ++LA  RG G       VRQ + DLLRRSARL RRAQ+ERD+R  +                 +F       P  G    G  +++   RKG       SRRPASASR+    +  S SFSL+      ++R  S    N    GRT +   P       +GLYSGGG RCSLKQRRP+SAKPALT  SGW+PGR+R   R G      +F E  RR +   G  G             G LD     SD+SDLS H IVEYTDEEE PF
Sbjct:  127 VRRRTRLSLDRERRRLDRVPRSQRLSQVRGHPLGGMTLLQLEERHLLDVGIGQMTRQLARRRGRGXXXXXXXVRQSNEDLLRRSARLIRRAQEERDSRLMIGNAAAYHPSSRYLGGDTRFSNAFRDEPWDGD--VGGRSQSAGGRKGGGSTKRRSRRPASASRDRGSRRLMSSSFSLEPTGGGSRDRAYSTSDYNRQAWGRTLEAEAPP------MGLYSGGGTRCSLKQRRPLSAKPALT--SGWEPGRARTRGRGGNGDRWDHFDEDDRRAVHSRGERGTVRAEAGVRSNEDGGLDY----SDMSDLSPHGIVEYTDEEEGPF 437          
BLAST of mRNA_H-elongata_contig50485.12292.1 vs. uniprot
Match: A0A6H5J9P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P3_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 5.330e-49
Identity = 143/327 (43.73%), Postives = 178/327 (54.43%), Query Frame = 0
Query:    1 IHRRTRLSLDQERRRLDRLPRSQRLRQVKGHPLGGMTLLELEDRHLLDVGIGKIAKRLASMRG-------GGVRQMDTDLLRRSARLFRRAQQERDARY----ALKFEQESIKTPLHG-------C------GAFGINTRATSARKGS-------RRPASASREHYKPASYSFSLDSAEQNRLASANTSKP--GRTDKRVYPT------------DGAPANVGLYSGGGDRCSLKQRRPMSAKPALTCGSGWKPGRSRDCRRDGEKS---YFGESRRRHLQEAGYIG--------QGKLDVVSIGSDLSDLSSHDIVEYTDEEESPF 271
            + RRTRLSLD+ERRRLDR+PRSQRL QV+GHPLGGMTLL+LE+R+LLDVG+G++ ++LA  RG             + DLLRRSARL RRAQ+ERD+R+    A  +   S    + G       C      G  G  +++  ARKG          PASASR            D   +  ++S+ + +P  G T  R Y T            +G    +GLYSGGG RCSLK RRP SAKPA T  SGW+PGR+R   R G      +F E  RR +   G  G        + K D     SD+SDLS H IVEY DEEE PF
Sbjct:  127 VRRRTRLSLDRERRRLDRVPRSQRLSQVRGHPLGGMTLLQLEERYLLDVGLGQMTRQLARRRGRXXXXXXXXXXXSNEDLLRRSARLIRRAQEERDSRFMMGNAAAYHPSSRYAVVRGDTRFSNACRDESWDGGAGGRSQSLGARKGGGSTXXXXXXPASASR------------DRGSRRLMSSSFSHEPTGGGTRDRAYSTSDYDRQAWGRTLEGEAPPMGLYSGGGTRCSLKHRRPSSAKPAFT--SGWEPGRARTRGRGGNGDGWDHFDEDDRRAVHSRGERGTVRAEAGARSKEDGGLDYSDMSDLSPHGIVEYNDEEEGPF 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50485.12292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LUA6_ECTSI5.850e-5648.00WW domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5J9P3_9PHAE5.330e-4943.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50485contigH-elongata_contig50485:2988..3806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50485.12292.1mRNA_H-elongata_contig50485.12292.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50485 2988..3806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50485.12292.1 ID=prot_H-elongata_contig50485.12292.1|Name=mRNA_H-elongata_contig50485.12292.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp
IHRRTRLSLDQERRRLDRLPRSQRLRQVKGHPLGGMTLLELEDRHLLDVG
IGKIAKRLASMRGGGVRQMDTDLLRRSARLFRRAQQERDARYALKFEQES
IKTPLHGCGAFGINTRATSARKGSRRPASASREHYKPASYSFSLDSAEQN
RLASANTSKPGRTDKRVYPTDGAPANVGLYSGGGDRCSLKQRRPMSAKPA
LTCGSGWKPGRSRDCRRDGEKSYFGESRRRHLQEAGYIGQGKLDVVSIGS
DLSDLSSHDIVEYTDEEESPFK*
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