prot_H-elongata_contig50474.12290.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50474.12290.1
Unique Nameprot_H-elongata_contig50474.12290.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length260
Homology
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 4.080e-42
Identity = 98/253 (38.74%), Postives = 141/253 (55.73%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            ++       CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++  +G   E  S RL+KVR+        TF+VGYAPTET  T        K  F   L + + EV   DHL+++MD NA TG R   GG  D +VLG YG+  +N+NG RL   A++ + S+ +T+F TPK G  +        K   ++ LDFIL+RQ DRR VRN++V       SDH L+  ++ L
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGG--VQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 7.280e-40
Identity = 99/251 (39.44%), Postives = 141/251 (56.18%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASI 257
            ++      +CD I +QETRR G+  I     GYV+  SG   G   K G+ GVG+A++E++  ++   G   E  S RL+KVR+        TF+VGYAPTETA          K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  AA+ + S+++T+F TPK G +         KE HR  LDFIL+RQ DRRLVRN +V       SDH L+  ++
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTV 247          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 7.430e-40
Identity = 99/251 (39.44%), Postives = 141/251 (56.18%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASI 257
            ++      +CD I +QETRR G+  I     GYV+  SG   G   K G+ GVG+A++E++  ++   G   E  S RL+KVR+        TF+VGYAPTETA          K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  AA+ + S+++T+F TPK G +         KE HR  LDFIL+RQ DRRLVRN +V       SDH L+  ++
Sbjct:  115 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTV 359          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.830e-39
Identity = 93/253 (36.76%), Postives = 139/253 (54.94%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            ++       CD I +QETRR+G+ ++     GYV+  SG   G   K G+ GVG+A++E++  ++   G   E  + RL+KVR+        TF+VGYAPTET  T        K  F   L   + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  A+  + S+ +T+F TPK G  +        K   ++ LDFIL+RQ DRR VRN++V       SDH L+  ++ L
Sbjct:    3 VMQLCSATGCDVIGLQETRREGQGSLAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGG--VQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.940e-39
Identity = 95/253 (37.55%), Postives = 142/253 (56.13%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            ++       CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++  +G   E  S RL+KVR+        TF+VGYAPTET  T        K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  A++ + S+ +T+F TPK G  +        K   ++ LDFIL+RQ DRR VRN++V       SDH L+  ++ L
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGG--VQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 5.150e-39
Identity = 94/253 (37.15%), Postives = 141/253 (55.73%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            ++       CD I +QETRR G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++  +G   E  S RL+KVR+        TF+VGYAPTET  T        K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  A++ + S+ +T+F TPK G  +        K   ++ LDFI +RQ DRR VRN++V       SDH+L+  ++ L
Sbjct:  200 VMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGG--VQHTFQSSNKGKEKYRLDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRL 446          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 8.310e-39
Identity = 94/253 (37.15%), Postives = 142/253 (56.13%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            ++       CD   +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++  +G   E  S RL+KVR+        TF++GYAPTET  T        K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  A++ + S+ +T+F TPK G +         KE +R  LDFIL+RQ DRR VR+++V       SDH L+  ++ L
Sbjct:    3 VMQICSATGCDVTGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.450e-38
Identity = 93/230 (40.43%), Postives = 131/230 (56.96%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVR 238
            ++      +CD I +QETRR G+  I     GYV+  SG   G   K G+ GVG+A++E++  ++   G   E  S RL+KVR+        TF+VGYAPTETA          K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  AA+ + S+++T+  TPK G        +G KE HR  LDFIL+RQ DRRLVR
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYIRTPK-GVHTFQSSNKG-KEKHR--LDFILMRQTDRRLVR 224          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.550e-38
Identity = 93/249 (37.35%), Postives = 139/249 (55.82%), Query Frame = 0
Query:   19 AGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            A + +  F    ETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++  +G   E  S RL+KVR+        TF+VGYAPTET  T        K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  A++ + S+ +T+  TPK G  +        K   ++CLDFIL+RQ DRR VRN++V       SDH L+  ++ L
Sbjct:   39 AREGDLSFGTFNETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPKGG--VQQTFQSSNKGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 281          
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 3.920e-38
Identity = 94/253 (37.15%), Postives = 141/253 (55.73%), Query Frame = 0
Query:   15 LLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVHCSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIFQHRAATTFIVGYAPTETAVTCH------KSKFLKELRSTVAEVPVSDHLILMMDDNALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFSTPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITV--YPKMKSDHRLISASICL 259
            ++       CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++  +G   E  S RL+KVR+        TF+V YAPTET  T        K  F   L + + EV   DHL+++MD NA TG R +G    D +++G YG+  +N+NG RL+  A++ + S+ +T+F TPK G  +        K   ++ LDFIL+RQ DRR VRN++V       SDH L+  ++ L
Sbjct:  682 VMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGG--VQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 928          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50474.12290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE4.080e-4238.74Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE7.280e-4039.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE7.430e-4039.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K259_9PHAE1.830e-3936.76Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5L7A7_9PHAE2.940e-3937.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q1_9PHAE5.150e-3937.15Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KSV0_9PHAE8.310e-3937.15Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KP87_9PHAE1.450e-3840.43Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE3.550e-3837.35Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE3.920e-3837.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 7..258
e-value: 4.7E-19
score: 70.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 6..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50474contigH-elongata_contig50474:1156..1935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50474.12290.1mRNA_H-elongata_contig50474.12290.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50474 1156..1935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50474.12290.1 ID=prot_H-elongata_contig50474.12290.1|Name=mRNA_H-elongata_contig50474.12290.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp
MPERGTNHPGRAEDLLMFAGKYECDFIAIQETRRDGKTTIKAPAAGYVVH
CSGHCDGDGGKPGILGVGLAVRESIASALDPDGIVPEHTSARLLKVRVIF
QHRAATTFIVGYAPTETAVTCHKSKFLKELRSTVAEVPVSDHLILMMDDN
ALTGGRGEGGGLGDVRVLGPYGKYTLNDNGSRLVACAAEYKPSIVSTFFS
TPKRGGRLDAVIYEGPKEYHRWCLDFILVRQHDRRLVRNITVYPKMKSDH
RLISASICLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf