prot_H-elongata_contig50465.12288.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50465.12288.1
Unique Nameprot_H-elongata_contig50465.12288.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
[Close]
BLAST of mRNA_H-elongata_contig50465.12288.1 vs. uniprot
Match: D8LDQ4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ4_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.550e-17
Identity = 47/61 (77.05%), Postives = 50/61 (81.97%), Query Frame = 0 
Query:    1 QEEQRRAEEADNSLSTQDKADRERLRAQQMAEVAAFSREEADGLADDPTLKGAHWSEKARA 61
            QEEQRRAE AD+SL+ QDKADRER R QQMAEV AFS  EADG+ DDP LKGAHWSEK  A
Sbjct:  488 QEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLA 548
[Close]
BLAST of mRNA_H-elongata_contig50465.12288.1 vs. uniprot
Match: A0A6H5KZB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZB6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.560e-17
Identity = 47/61 (77.05%), Postives = 50/61 (81.97%), Query Frame = 0 
Query:    1 QEEQRRAEEADNSLSTQDKADRERLRAQQMAEVAAFSREEADGLADDPTLKGAHWSEKARA 61
            QEEQRRAE AD+SL+ QDKADRER R QQMAEV AFS  EADG+ DDP LKGAHWSEK  A
Sbjct:  505 QEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPVLKGAHWSEKPLA 565
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50465.12288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDQ4_ECTSI1.550e-1777.05DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KZB6_9PHAE1.560e-1777.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50465contigH-elongata_contig50465:3710..3922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50465.12288.1mRNA_H-elongata_contig50465.12288.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50465 3710..3922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50465.12288.1 ID=prot_H-elongata_contig50465.12288.1|Name=mRNA_H-elongata_contig50465.12288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
QEEQRRAEEADNSLSTQDKADRERLRAQQMAEVAAFSREEADGLADDPTL
KGAHWSEKARAHSLLLILLL*
back to top