prot_H-elongata_contig50415.12276.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50415.12276.1
Unique Nameprot_H-elongata_contig50415.12276.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: A0A015JDH1_RHIIW (Cmk1p n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015JDH1_RHIIW)

HSP 1 Score: 87.0 bits (214), Expect = 8.920e-16
Identity = 65/247 (26.32%), Postives = 121/247 (48.99%), Query Frame = 0
Query:   16 AQATSNLAQHMVAHHKSFPAYVEHMKKEALKTVANTQPRDKGIMGFIKREDESALHQR----LILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLTHTAVVAREKLKAL--SAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNA--IMQQTN--MEWLPCICHVLEL-VMGVLMTRFKEVK 251
            + +TSN+  H+ A H       E  +    +T  ++         F K       +Q     L+L FI+   Q   +++ +G++ ++  F   PS  IPC +T+  L+T    +  ++L  L  ++ + +S+T D WT+ +    +G+TGHW+N+++K       +  +   H  + +++ L+  +  Y  LE  +  V TD  +N K A  I+ Q N  ++ LPC+ H L+L V+  L +  K+VK
Sbjct:  107 SSSTSNMKYHLNAAHNKTEGDEEKEESIIHQTTIDSM--------FSKARSHGKSYQHKLNTLLLEFIITDSQPFHILKSKGFRKLL--FALDPSYSIPCDKTIKNLITEVYKLGVKELLTLVINSCEFISITTDLWTARSKTGYIGITGHWVNENFKPYDILIGIKSILYPHTAVAISSYLEKYIEEYR-LENKIVCVVTDNGSNMKAAVNILNQKNDKIQRLPCVAHTLQLTVIKALKSINKQVK 342          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: UPI001AADA268 (E3 SUMO-protein ligase ZBED1-like n=5 Tax=Rana temporaria TaxID=8407 RepID=UPI001AADA268)

HSP 1 Score: 84.0 bits (206), Expect = 8.800e-15
Identity = 64/240 (26.67%), Postives = 113/240 (47.08%), Query Frame = 0
Query:    9 CTKPVIMAQATSNLAQHMVAHHKSFPAYVEHMKKEALKTVANTQPRDKGIMGFIKREDE------SALHQRLILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLTHTAVVAREKL----KALSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNMEWLPCICHVLEL 238
            C K +    + ++L  H+   H   P   +H+     +  +  QP    I  F+ + ++      SA  +  I  +I    +  ++V+++G +T++R   +  +  +P RRT+  ++     +  EKL    KA+ +   ++LT D WTS N  +  G+TGHWI+ DWKL         +   H    +A   K   A+++I +  +  + TD A N   AI  QT+   +PCI H L+L
Sbjct:   42 CNKQLAFRGSNTSLTYHLQHKH---PLKYQHVVNSDWQKSSPVQP----ISNFMSQSNKPVSAKVSADLKIAIAQWIASSGRPTAIVDDDGLQTVLRIALQNQTYNLPSRRTIDAVIGQ---MYNEKLTQHKKAIESIHSIALTTDFWTSNNNESYCGITGHWIDSDWKLTSVALGCLLVDERHTAENVAGFYKEFAATWNISD-KICCIITDNARNMVAAI-GQTDFSHIPCIAHCLQL 269          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: UPI000BBDE0A5 (zinc finger BED domain-containing protein 4-like n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=UPI000BBDE0A5)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-14
Identity = 70/237 (29.54%), Postives = 117/237 (49.37%), Query Frame = 0
Query:   19 TSNLAQHMVAHHKSFPAYVEHMKKEALKTVANTQPRDKGIMGFIKREDESALHQ-------RLILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRR-----TMHKLLTHTAVVAREKLKALSAGQEVSLTCDGWTSG-NGLAMLGVTGHWINKD-WKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNMEWLPCICHVLELVMG 241
            T+NL +H+  HH       EH +  A+K +     R + ++   +R+ + +            +L FIV   Q +SVVE EG+ ++M     R SL  P RR      + +L    +    +KLK +   Q +S T D WTS  + ++++ +T HWI++D + L CA   V +  GSH+   +AA++  ++  + I    V  +  D A+N K A MQ  ++  L C  H L+LV+ 
Sbjct:   55 TTNLIKHLQKHHPK-----EHDEFLAMKGLKAQTSRQESLLQSFERQGKLSPDNVKAKEITEKVLNFIVLDDQPLSVVENEGFCSLMEYLQPRYSL--PSRRYLSETALPELYNRVSTKLADKLKGV---QNLSFTTDIWTSDVSPMSLISLTVHWIDRDTYGLCCAVLQVKKCRGSHNRATIAASITEMLNHWGIPLEKVHVILRDNASNMK-AAMQDLSVSNLGCFAHSLQLVVN 280          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: A0A8C4WWM8_EPTBU (BED-type domain-containing protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WWM8_EPTBU)

HSP 1 Score: 82.8 bits (203), Expect = 2.100e-14
Identity = 65/241 (26.97%), Postives = 116/241 (48.13%), Query Frame = 0
Query:    9 CTKPVIMAQATSNLAQHMVAHHKSFPAYVE-HMKKEALKTVANTQPRDKGIMGFIKREDESALHQRL---ILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLT---HTAVVAREKLKALSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNMEWLPCICHVLELVMGV 242
            C+K +    +TS + +H+ + H      +E H K++  +  ++T                SA H+ L   +  FIV G + I  VEEEG++ M++ F +R +L  P R++   ++    +  V     +  L     V+LT D WTS      +GVT H++N+DW +     + +EL   HD   +A+A+  ++  ++ L+  ++AV TD A N   A+ +      + C  H L L++ V
Sbjct:   56 CSKKLSYMSSTSVMHKHLKSFHPREARGMEGHAKRDRDQLSSSTH-----FQSATPYAAGSARHKELTTAVARFIVKGMRPIYTVEEEGFRNMLKIFDQRYTL--PSRKSFSSVIIPQLYNNVKEESVVPQLQEASYVALTTDMWTSRASDNYIGVTAHFVNRDWSIGHFTLENAELPPPHDYEHIASAMHEILEDWN-LKDKLSAVVTDNATNITEAVREGLGFPHITCFGHTLNLMVKV 288          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: E2A185_CAMFO (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Camponotus floridanus TaxID=104421 RepID=E2A185_CAMFO)

HSP 1 Score: 78.6 bits (192), Expect = 2.110e-13
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = 0
Query:   75 ILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLTHTAVVAREKLKA-LSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNME-WLPCICHVLE-LVMGVLMT 245
            IL  I      +S V+ EG+K +M+  T  P   +P R+T+ +L+     V +E+  A L      S+TCD WT  +  + LGVT H++    ++   C  V  L+ +H    L   L +V+  +++ ++ +TAV TD+A N K A+    + +  L C  H L  LV  VL+T
Sbjct:   10 ILYMIAVDKMPLSTVQNEGFKLLMK--TVAPLYTVPSRKTVTRLIDVRYDVLKERFIATLKEIDSYSITCDNWTDISNQSYLGVTIHYVTPQIEMKSVCVGVFPLSENHTSQYLGECLTSVIKDFNLEQSRITAVVTDSATNIKKAVRDFVDQDKHLACFAHTLSHLVPDVLVT 181          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: A0A814NDW3_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814NDW3_9BILA)

HSP 1 Score: 77.8 bits (190), Expect = 2.920e-13
Identity = 48/163 (29.45%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   86 ISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHK-LLTHTAVVAREKLK-ALSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNMEWLPCICHVLELVMGVLMTR 246
            +S+V+ + ++ +++     P   +PCR+T  K L+   +V+ +  +   LS     SLTCD WTS + L+ LGVT H++NKD+ L      +  L   H    L   LK ++  +  L+  V  + +D+ +N K AI +  N +++PC+ H + L +  +M+ 
Sbjct:   13 VSIVDRDEFRNLLKDAI--PGYSVPCRQTFTKNLIPQKSVMVKSSIAHELSGVNSFSLTCDAWTSNSNLSYLGVTCHYLNKDFILTSRLLSLKYLEEDHKSEYLFEVLKEIINEW-YLDGKVFKIVSDSGSNMKGAITR-FNDKFVPCVAHRINLCVNDIMSE 171          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: A0A2I4CE76_9TELE (zinc finger BED domain-containing protein 1-like n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CE76_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 3.200e-13
Identity = 71/247 (28.74%), Postives = 105/247 (42.51%), Query Frame = 0
Query:    1 KAKCTVEGCTKPVIMAQATSNLAQHMVAHHKSFPAYVEHMKKEA----LKTVANTQPRDKGIMGFIKREDESALHQRLILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRR-----TMHKLLTHTAVVAREKLKALSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNMEWLPCICHVLEL 238
            KA    + C   V  +  T+NL  HM  HH        +M K      LK      P+         +  ES ++      FI    + +SVVE EG++ MM+  T  P   IP R+      + KL T    V  + +++L++ + V+LTCD WTS    + + +T H I  +WKL         +  SH G  LA  L   +A +  L+     V TD A+N   A     +M  + C  H L L
Sbjct:   36 KAHAVCKICNARVKYSGNTTNLRAHMARHHSDVQLATANMTKRVESAQLKLTDVQTPKLPSSSARATKITESVIY------FICKDMRPLSVVENEGFRNMMK--TLEPRYSIPSRQHITDIALPKLYTE---VKAKVMESLNSAERVALTCDSWTSRATESYVTITAHHITDEWKLDSHVLQTRAMHDSHTGQNLAVVLGEAVAEWK-LDDKDPVVVTDNASNMTVAA-SLADMTHVQCFAHSLNL 269          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: UPI001C1AE18E (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1AE18E)

HSP 1 Score: 78.2 bits (191), Expect = 4.350e-13
Identity = 63/251 (25.10%), Postives = 114/251 (45.42%), Query Frame = 0
Query:   18 ATSNLAQHMVAHHKSFPAYVEHMKKEALKTVANTQPRDKGIMGFIKREDESALHQRLILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLTHTAVVAREKLK--ALSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKN--------AIMQQTNMEW----LPCICHVLELVMGVLMTRFK--EVKD 252
            +T NL +H+  H       V+  + E +K   + + +D   +        + + Q ++  +I    QS +VVE   +  ++R     P++ +P   T+   + +   + R+ +K    ++   +S T DGWTS N ++ LGVT H+I+KDWK+     D   L GSH G  +A      +  ++IL   + A+T D AAN            +  +TN       + C+ H++ L    ++   K  E +D
Sbjct:  104 STGNLNRHLKTHLDKIDPSVQR-QAEFMKKFIDGENKDSNTVF------SNEIFQEMLAAWIAVDDQSFTVVECPEFHQVIR--LCNPNVNLPSADTIRSDILNLYSIYRQDIKNQLQNSPGRLSFTLDGWTSPNNISFLGVTCHYIDKDWKINDILLDFICLKGSHSGENMAIEFSQCVKEFNILS-KIIAITADNAANNNTFLKELEEICVQNETNFHHKKNHVRCLAHIINLTTNEILKHVKAGEARD 344          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: UPI0010FB1D17 (zinc finger BED domain-containing protein 1-like isoform X1 n=3 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB1D17)

HSP 1 Score: 79.0 bits (193), Expect = 4.510e-13
Identity = 70/277 (25.27%), Postives = 120/277 (43.32%), Query Frame = 0
Query:    2 AKCTVEGCTKPVIMAQATSNLAQHMVAHHKSFPAYVEHMKKEALKTVANTQ------PRDKG----IMGFIKREDESALHQR--------------LILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLTHTAVVAREKLKA-LSAGQEVSLTCDGWTSGNGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAIMQQTNME-WLPCICHVLELVMGVLMTRFKEVKD 252
            A+C +  C K       T+NL QH+ A H  F      +K++   T  ++       P+ K       G + R DE+    +               IL  I      +S V  EG+K +M+  T  P   +P R+TM +L+     V +E+  A L       +TCD WT     + LGVT +++    ++   C  V  ++ +H    L   L +V+  +++ ++ +TAV TD+AAN K A+      +  L C  H L  ++  ++     V++
Sbjct:  126 ARCNI--CNKVYKHGGNTTNLFQHLSASHALFCPQANRLKRKVHVTSGSSDDSTDDPPQSKRGKFKSQGKLIRIDEAFERTKSFLEGGKTSDKITNAILYMIAVDKMPLSTVHNEGFKLLMK--TVAPLYTVPSRKTMTRLIDVRYDVLKERFIATLKKLDSYCITCDNWTDVGNQSYLGVTIYYVTPQIEMKSGCVGVFPMSENHTSQYLGECLTSVIKDFNLEQSRITAVVTDSAANIKKAVRDFVGQDKHLACFAHTLSHLVPDVLVAMPTVRE 398          
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Match: A0A6J2JE17_BOMMA (zinc finger BED domain-containing protein 1-like isoform X1 n=11 Tax=Obtectomera TaxID=104431 RepID=A0A6J2JE17_BOMMA)

HSP 1 Score: 77.8 bits (190), Expect = 1.080e-12
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 0
Query:   75 ILGFIVDGHQSISVVEEEGYKTMMRGFTKRPSLQIPCRRTMHKLLTHTAVVAREKLKA-LSAGQEVSLTCDGWTSG-NGLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDILETNVTAVTTDTAANQKNAI-MQQTNMEWLPCICHVLELV 239
            +L  I   HQ  S+VE EG+KT+M+  T  P  ++P R T+ + L     V  E +K  LS+ ++++LT D W+   N  + LG+T H+   D +L      V EL   H    L+  L  V   + I + NVTAV TD AAN   AI +     + +PC  H L LV
Sbjct:  162 LLFMICKDHQPFSIVENEGFKTLMK--TVAPQYKLPSRTTLRRWLDDKYEVISETIKKMLSSIEDITLTTDIWSDTLNMKSFLGITAHF-GIDIELYSVTLGVYELDERHTSDYLSEILLKVCQDWKIDQENVTAVVTDNAANIVKAIELAFGRRKHIPCFAHTLNLV 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50415.12276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A015JDH1_RHIIW8.920e-1626.32Cmk1p n=2 Tax=Rhizophagus irregularis TaxID=588596... [more]
UPI001AADA2688.800e-1526.67E3 SUMO-protein ligase ZBED1-like n=5 Tax=Rana tem... [more]
UPI000BBDE0A51.140e-1429.54zinc finger BED domain-containing protein 4-like n... [more]
A0A8C4WWM8_EPTBU2.100e-1426.97BED-type domain-containing protein n=1 Tax=Eptatre... [more]
E2A185_CAMFO2.110e-1331.61Zinc finger BED domain-containing protein 1 (Fragm... [more]
A0A814NDW3_9BILA2.920e-1329.45Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A2I4CE76_9TELE3.200e-1328.74zinc finger BED domain-containing protein 1-like n... [more]
UPI001C1AE18E4.350e-1325.10Hypothetical protein n=2 Tax=Rhizophagus irregular... [more]
UPI0010FB1D174.510e-1325.27zinc finger BED domain-containing protein 1-like i... [more]
A0A6J2JE17_BOMMA1.080e-1235.71zinc finger BED domain-containing protein 1-like i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 72..240
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 72..240
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 127..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50415contigH-elongata_contig50415:2584..4106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50415.12276.1mRNA_H-elongata_contig50415.12276.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50415 2584..4106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50415.12276.1 ID=prot_H-elongata_contig50415.12276.1|Name=mRNA_H-elongata_contig50415.12276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
KAKCTVEGCTKPVIMAQATSNLAQHMVAHHKSFPAYVEHMKKEALKTVAN
TQPRDKGIMGFIKREDESALHQRLILGFIVDGHQSISVVEEEGYKTMMRG
FTKRPSLQIPCRRTMHKLLTHTAVVAREKLKALSAGQEVSLTCDGWTSGN
GLAMLGVTGHWINKDWKLVCACFDVSELAGSHDGIRLAAALKAVMASYDI
LETNVTAVTTDTAANQKNAIMQQTNMEWLPCICHVLELVMGVLMTRFKEV
KD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf