prot_H-elongata_contig50359.12270.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50359.12270.1
Unique Nameprot_H-elongata_contig50359.12270.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length217
Homology
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: D7FL32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL32_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 1.160e-103
Identity = 157/217 (72.35%), Postives = 179/217 (82.49%), Query Frame = 0
Query:    1 CAGEGARVASESESNVPEGIAVD-EGCRLAGFLVVTTTQGNFHFAPGHRLHRRSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDSLFVSGRKYRWR 216
            CAGE     S + +N  E   V+ EGCRLAG L V+ T+GNFHFAPGHRLHR +N LS  +RIQVALESFNTTHTI+TLT GDQPP  HASPKH  +STVL+GHQKTVQDTHAMHQYFLQ+VPTVYR  NG TVHSNQYS TEHLK+V +G +RGLPGVYF+YEVSPVQALVEEKR+GFL+FLTGACGVVGG+YT+L L+NTGID L   G+ +R R
Sbjct:  240 CAGE---ALSANSANTMESPPVENEGCRLAGHLEVSRTEGNFHFAPGHRLHRHANELSFVDRIQVALESFNTTHTINTLTFGDQPPPGHASPKHAVASTVLEGHQKTVQDTHAMHQYFLQLVPTVYRLDNGETVHSNQYSATEHLKHVHDGTSRGLPGVYFYYEVSPVQALVEEKRKGFLAFLTGACGVVGGVYTILGLVNTGIDGLLGMGKAHRSR 453          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A482SKL0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKL0_9ARCH)

HSP 1 Score: 167 bits (422), Expect = 1.410e-46
Identity = 83/197 (42.13%), Postives = 122/197 (61.93%), Query Frame = 0
Query:   14 SNVPEGIAVDEGCRLAGFLVVTTTQGNFHFAPGHRLHRRSNTLSLF---ERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDSLF 207
            S + E  A D GC++ G L ++ T G+FH AP  ++H +     +F   + I    + FN TH+++ L+ GD  P           ++ L G  + V+DTH M+QYF++VVPT Y+ +N   V SNQYSVTEH+  +  G  RGLPGVYF+YEVSP+QA +EEK+R ++ FLT  C +VGG YT++ L++  + S F
Sbjct:  186 STLREQYAEDGGCQVYGRLHLSKTSGHFHIAPTKKVHEKQANGGMFNILDLISFTFDQFNVTHSVNALSFGDHFPG---------INSPLDGQHRLVKDTHGMYQYFIKVVPTRYKPLNKPEVQSNQYSVTEHMSTLAPGSGRGLPGVYFYYEVSPIQAFIEEKKRSWMHFLTSVCAIVGGAYTVMGLLDILLSSCF 373          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A7S2B099_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B099_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.390e-46
Identity = 78/186 (41.94%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   23 DEGCRLAGFLVVTTTQGNFHFAPGHRLHRRSNT--LSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDSL 206
            DEGC L G + +TT  GNFHFAPG ++   S     ++ E +    +SFN +H I +L+ G+  P           +  L    + + D H M+QY++++VPTVY++++G  V SNQYSVTEHL++V  G  RGLPGV+FFYEVSPV A+ EE +R F+ F+T  C ++GG++T++  ++T I  +
Sbjct:   77 DEGCNLFGDMDLTTVNGNFHFAPGKKMGEASKLGHFTVSELVSFTFQSFNISHEIKSLSFGNTFPG---------ITNPLDNVVRKISDGHGMYQYYIKIVPTVYKYIDGREVVSNQYSVTEHLRHVNPGTGRGLPGVWFFYEVSPVHAVFEETKRSFMEFITSVCAILGGVFTVMGFVDTIIGEV 253          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A7S2K8A8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8A8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.540e-43
Identity = 76/180 (42.22%), Postives = 115/180 (63.89%), Query Frame = 0
Query:   23 DEGCRLAGFLVVTTTQGNFHFAPGHRLHR--RSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLIN 200
            DEGCR+ G + ++T  GNFHFAP H L      + L++F+ ++   E F+ THTI  L  G++       P  V     L G  + ++D H M+QY++QVVPT+Y++++G  V + Q+SVTEHL++V  G  RGLPGV+FFYEVS +    EE+R+G++ F T  C VVGG++T +  ++
Sbjct:   47 DEGCRIYGRISLSTGGGNFHFAPSHELESMGHESQLTVFDYMRFTFEDFDVTHTIDYLHFGEKGKF---FPNQVHQ---LDGETRKIEDGHGMYQYYIQVVPTLYKYLDGSRVETFQFSVTEHLRHVAPGQGRGLPGVFFFYEVSALHVEFEERRKGWIRFFTSVCAVVGGVFTFVGAVD 220          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A6V2FLH9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FLH9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 9.500e-43
Identity = 77/186 (41.40%), Postives = 116/186 (62.37%), Query Frame = 0
Query:   24 EGCRLAGFLVVTTTQGNFHFAPGHRLHR----RSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDS 205
            EGC + G + ++T  GN H  PG  L +    + N +S+ + I  A ESFN +HT++ +  G + P       HV     L G ++ ++D + M+QY++QVVPT+YRF+NG  + +NQYSVTEHL++V     RGLPGV+FFYEVS +   +EE R+G++ F T  C VVGG++T + + +  I S
Sbjct:  220 EGCNIHGIVALSTGGGNLHVTPGRGLEQMGTQKENMISISDFIMEAFESFNVSHTVNKIRFGKEIPG------HVHQ---LDGREQVIEDAYGMYQYYIQVVPTLYRFLNGTEIQTNQYSVTEHLRHVPPASRRGLPGVFFFYEVSALHVEIEEYRKGYIHFFTSVCAVVGGVFTFMGMADRMIYS 396          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A7S3H281_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H281_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.590e-42
Identity = 83/205 (40.49%), Postives = 121/205 (59.02%), Query Frame = 0
Query:   14 SNVPEGIAVDEGCRLAGFLVVTTTQGNFHFAPGHRLHRRSNTLS-----------LFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFT-VHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDSL 206
            +N+ E  A D GC+L G L +    G+FH AP  +LH+ +   S           L + I    + FN +HTI+TL+ GD  P            + L G  + VQDTH M+QY+++VVPT Y+ +   T + SNQY+VTEH+ ++  G  RGLPGVYF YEVSP+QAL EEKR G L F+T  C +VGG ++++ L++  + ++
Sbjct:  211 ANMNEQFAEDGGCQLYGSLDLNRGSGHFHIAPHKKLHQPAGDASGRPGQNAGLFNLMDLISFTFDQFNVSHTINTLSFGDNFPG---------IKSPLDGETRGVQDTHGMYQYYIKVVPTRYKALYSTTEIQSNQYAVTEHMSHLAPGSGRGLPGVYFHYEVSPIQALFEEKRGGMLGFITSCCAIVGGAFSVMGLVDVFLGAV 406          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A1Z5JLU5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLU5_FISSO)

HSP 1 Score: 156 bits (394), Expect = 3.130e-42
Identity = 80/193 (41.45%), Postives = 121/193 (62.69%), Query Frame = 0
Query:   24 EGCRLAGFLVVTTTQGNFHFAPGHRLHR---RSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQA-LVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDSLFVSGRK 212
            EGC + G + + +  GN H APG  +     R  ++SLF+ + +    +N THTIH L  G         P+H  +   L+G ++ V+D+H M+QY+LQ++PT Y+F NG T+ +NQYSVTEHL++V  G  RGLPGV+FFYEVSP+   + E  R+G+++F+T  C VVGG+ T + L++      ++ GRK
Sbjct:  213 EGCNVHGKVALDSGGGNLHLAPGEDMTNGLTRPASVSLFDLLLLKFHEWNVTHTIHKLRFG---------PEHPDAIYQLEGQRRVVKDSHGMYQYYLQIIPTQYKFQNGTTIQTNQYSVTEHLRHVPPGSNRGLPGVFFFYEVSPLHVEITEGYRKGWIAFVTSVCAVVGGVVTTMGLLDQ-----YLFGRK 391          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A7S1FY63_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY63_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.100e-41
Identity = 77/195 (39.49%), Postives = 121/195 (62.05%), Query Frame = 0
Query:   10 SESESNVPEGIAVDEGCRLAGFLVVTTTQGNFHFAPGHRLHR----RSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLIN 200
            S+ ++ +     VDEGCR+ G + +++  GN H APG  +        + +S+ + + +A E +N THTI  L  G + P + ++         L G  +TV++ H M+QY+LQ+VPT Y  ++G T+ +NQ SVTEH++ V+ G  RG+PGV+FFYEVSP   + EE RRG++ F T  C +VGG+YT+L +I+
Sbjct:  206 SQCKNTIKAKDEVDEGCRMTGNVQLSSAGGNLHIAPGRDVSDIGSGGDSFISITDLLGLAFEKYNVTHTIQKLHFGPRLPEKMSN----VEQQQLDGQVRTVKNVHGMYQYYLQIVPTRYVKLDGTTITTNQMSVTEHMRIVKPGSGRGMPGVFFFYEVSPFHVIFEENRRGWIRFFTSVCAIVGGVYTVLGMID 396          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: B8C292_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C292_THAPS)

HSP 1 Score: 153 bits (387), Expect = 3.040e-41
Identity = 82/204 (40.20%), Postives = 117/204 (57.35%), Query Frame = 0
Query:   24 EGCRLAGFLVVTTTQGNFHFAPGHRLHRRS-------------NTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASS----TVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLINTGIDSLFVSG 210
            EGC + G++ ++T  GN HFAP  +  +               N  S+ E    A E FN THT++ L+ G   P      KHV +S    + L G  +TV D + M Q++LQ+VPTVYRF+NG T+ + QYSVTEH+++V  G  RG+PGV+FFYEVS +    EE RRG+  F TG C  VGG +T++ +++  +  L   G
Sbjct:  193 EGCNIHGYVALSTGGGNLHFAPDRQWEKEGDKQNGLMIMGGFINLDSIVEMFNDAYEQFNVTHTVNKLSFGPYMP------KHVKNSLNLTSQLDGATRTVTDGYGMFQFYLQIVPTVYRFLNGTTIETFQYSVTEHVRHVDPGSNRGMPGVFFFYEVSALHVEFEEYRRGWTHFFTGVCAAVGGAFTVMGMLDRLVFDLKSGG 390          
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Match: A0A7S1BW07_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BW07_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.200e-41
Identity = 74/183 (40.44%), Postives = 111/183 (60.66%), Query Frame = 0
Query:   22 VDEGCRLAGFLVVTTTQGNFHFAPGHRLHR----RSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVLQGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEGPARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLIN 200
            V EGCR+ G + +++  GN H APG          S T S+ + + +A E +N THTI+ L  G + P E            L G  + ++D H M+QY++Q++PT +  ++G  + +NQ SVTEH++ V+ G  RG+PGV+FFYEVSP   + EEKRRG+  F T  C +VGG+YT+L +I+
Sbjct:  220 VGEGCRIEGNVQLSSAGGNLHIAPGRDATNIGSGSSRTFSISDLLGLAFEKYNVTHTINKLHFGPRLPNEMGD----IVQRQLDGESRAIKDMHGMYQYYIQIIPTRFVLLSGTAIETNQMSVTEHMRVVKPGSGRGMPGVFFFYEVSPFHVIFEEKRRGYFRFFTSICAIVGGVYTVLGMID 398          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50359.12270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL32_ECTSI1.160e-10372.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A482SKL0_9ARCH1.410e-4642.13Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2B099_9STRA3.390e-4641.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2K8A8_9STRA4.540e-4342.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6V2FLH9_9STRA9.500e-4341.40Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3H281_9STRA1.590e-4240.49Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1Z5JLU5_FISSO3.130e-4241.45Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1FY63_9STRA1.100e-4139.49Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B8C292_THAPS3.040e-4140.20Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1BW07_9STRA6.200e-4140.44Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 22..199
e-value: 1.3E-47
score: 162.5
NoneNo IPR availablePANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 18..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 200..216
NoneNo IPR availableTMHMMTMhelixcoord: 177..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50359contigH-elongata_contig50359:1788..4099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50359.12270.1mRNA_H-elongata_contig50359.12270.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50359 1788..4099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50359.12270.1 ID=prot_H-elongata_contig50359.12270.1|Name=mRNA_H-elongata_contig50359.12270.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp
CAGEGARVASESESNVPEGIAVDEGCRLAGFLVVTTTQGNFHFAPGHRLH
RRSNTLSLFERIQVALESFNTTHTIHTLTLGDQPPAEHASPKHVASSTVL
QGHQKTVQDTHAMHQYFLQVVPTVYRFVNGFTVHSNQYSVTEHLKNVQEG
PARGLPGVYFFYEVSPVQALVEEKRRGFLSFLTGACGVVGGMYTLLRLIN
TGIDSLFVSGRKYRWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C