prot_H-elongata_contig50357.12269.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 102 bits (254), Expect = 1.650e-22 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 0
Query: 30 VGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAYHDSRKQVGLLKKAMYGLVHAGLLW 143
+G + FK K DG +EKYK RLVAQGF QV+GI Y E+ +P SIR +L++ A WE Q+DV A+L ++EEEIY+++P + S V LKKA+YGL A W
Sbjct: 1039 IGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA) HSP 1 Score: 98.6 bits (244), Expect = 1.870e-22 Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAY--HDSRKQVGLLKKAMYGLVHAGLLW 143
P+ + +G F K DG IE+YK RLVA+G+ Q GI Y+E+ +P ++R VL++ A FGW+ QLDV A+L ++EEE+Y+E+P+ + + R +V LLKKA+YGL + W
Sbjct: 29 PRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 100 bits (250), Expect = 5.570e-22 Identity = 52/121 (42.98%), Postives = 78/121 (64.46%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAYHDSRK-QVGLLKKAMYGLVHAGLLW 143
P + +G + +K K + DG IE+YK RLVAQGF Q++GI Y+E SP S+R L+++ A WE Q+DV+ A+L D+EEE+Y++LPE + + K +V L+K++YGL A W
Sbjct: 588 PPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A438FT54_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FT54_VITVI) HSP 1 Score: 100 bits (248), Expect = 8.630e-22 Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAY--HDSRKQVGLLKKAMYGLVHAGLLW 143
PK + +G + +K K++KDGG++KYK RLVA+G++Q G+ Y+E +P +IR VLSM A W QLDV A+L ++EEE+Y++ P Y QV LKKA+YGL A W
Sbjct: 63 PKGQKSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKQEFGVDYKEVFAPVAKLDTIRLVLSMAAQNSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQAPRAW 184
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 100 bits (248), Expect = 9.260e-22 Identity = 52/121 (42.98%), Postives = 78/121 (64.46%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAYHDSRK-QVGLLKKAMYGLVHAGLLW 143
P + +G + +K K + DG IE+YK RLVAQGF Q++GI Y+E+ SP S+R L++ A WE Q+DV+ A+L D+EEE+Y++LPE + + K +V L+K++YGL A W
Sbjct: 119 PPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A5BDW5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=16 Tax=Vitis vinifera TaxID=29760 RepID=A5BDW5_VITVI) HSP 1 Score: 94.4 bits (233), Expect = 9.780e-22 Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 0
Query: 30 VGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAY--HDSRKQVGLLKKAMYGLVHAGLLW 143
+G + FK K D G IE+YK RLVA+GF Q +GI Y E+ SP + S+R +L+++A F E +Q+DV A+L ++EEE+Y++ PE + D + V LKK++YGL A W
Sbjct: 26 IGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVSKLKKSIYGLKQASRQW 141
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY) HSP 1 Score: 95.9 bits (237), Expect = 1.180e-21 Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAYHDSRKQVGLLKKAMYGLVHAGLLW 143
PK + VG + F++K +K+G + KYK RLVAQG+ Q+ G+ + E+ +P SIR +L++ WE Q+DV AYL D++EEIY+ PE ++D V L K +YGL +G W
Sbjct: 10 PKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFNDGSGHVCRLHKTLYGLKQSGHKW 129
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A438FWZ5_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FWZ5_VITVI) HSP 1 Score: 99.8 bits (247), Expect = 1.360e-21 Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAY--HDSRKQVGLLKKAMYGLVHAGLLW 143
PK + +G + +K K++KDGG++KYK RLVA+G++Q G+ Y+E +P +IR VLSM A W QLDV A+L ++EEE+Y++ P Y QV LKKA+YGL A W
Sbjct: 349 PKGQKSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKQEFGVDYKEVFAPVAKLDTIRFVLSMAAQKSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQAPRAW 470
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A0A5K0WT86_9MAGN (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WT86_9MAGN) HSP 1 Score: 99.4 bits (246), Expect = 1.800e-21 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 0
Query: 30 VGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAYHDSRKQ--VGLLKKAMYGLVHAGLLW 143
VG + +K K D G IE+YK RLVA+GF Q++GI Y E SP A+ S+R VL+++A F E Q+DV A+L D++EE+Y++ P+ + +S K V L KA+YGL HA W
Sbjct: 174 VGCKWVYKTKRDSKGNIERYKARLVAKGFTQMEGIDYNEIYSPVSAKESMRIVLALVAHFDLELHQMDVKTAFLNGDLDEEVYMDQPQGFSESGKDHLVCKLNKAIYGLQHASRQW 289
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI) HSP 1 Score: 99.4 bits (246), Expect = 1.960e-21 Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 0
Query: 24 PKREDGVGHEIRFKRKIDKDGGIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRKVLSMIAAFGWEARQLDVDMAYLETDVEEEIYVELPEAYHDSRK-QVGLLKKAMYGLVHAGLLW 143
P + +G + +K K + DG IE+YK RLVAQGF Q++GI Y+E SP S+R L++ A WE Q+DV+ A+L D+EEE+Y++LPE + + K +V L+K++YGL A W
Sbjct: 842 PPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50357.12269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig50357.12269.1 ID=prot_H-elongata_contig50357.12269.1|Name=mRNA_H-elongata_contig50357.12269.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bpback to top |