mRNA_H-elongata_contig115473.1225.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D8LC47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC47_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.130e-61 Identity = 99/179 (55.31%), Postives = 120/179 (67.04%), Query Frame = 1
Query: 1 DYLTILPTMMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
DY I + + E +GD D+D +R V +C NDGDHLQASSSLDPSFWPTHPTMERL+M+ LTG +TD TWPD D+TV + G E +SLY + C+GHRGSDVFPFG +D+ GF +TGI+G GN LTNRE L A D R N L Y+YD F W HC DGV+F+D
Sbjct: 74 DYEDIFDRLTMAESILGDADDDVKREVTSIICSTPVNDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDDDVTVTKPD-GTVEVESISLYGETCSGHRGSDVFPFGL-LDSDTDGFTIKTGIRGNLDTGNQLTNREALQAFDARSNSLPYVYDTFKWTHCEADGVNFDD 250
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.900e-59 Identity = 97/179 (54.19%), Postives = 126/179 (70.39%), Query Frame = 1
Query: 1 DYLTILPTMMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
DY ++ +M +ED IGD+D+ TQR V++TLC G+ N G H Q+SSS DP FWP HPTMERL+ F LTG++ D W D+D V + G + +EI S+YSD C GH GSDVFP+ + +DT GF+ +TGI+G+ GN LTNRE+L A+DPR N LSY+YD F+W HC DG DFND
Sbjct: 504 DYKIVMESMEYLEDLIGDFDDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTFAD-GTTVSEITSVYSDHCIGHHGSDVFPY-YLLDTDTDGFEVKTGIRGQPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFND 680
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 201 bits (512), Expect = 3.560e-59 Identity = 99/180 (55.00%), Postives = 119/180 (66.11%), Query Frame = 1
Query: 1 DYLTILPTMML-MEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
D+ TI L +D IGDYD+ T+R V+ +C DGDHL A SSLDP+FWP HPTMERLFMF LTG +TD WPDS+ + D + G + E S Y D C+GH GSDVFPFG D D GFK +TG+ G E GN LTNREVL +D R N L Y+YD+F W HC+QDG+DF D
Sbjct: 330 DWKTIYTNSTLDFDDVIGDYDDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSD-GNTVVETTSKYGDTCHGHSGSDVFPFGLLEDD-DAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYD 507
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 204 bits (520), Expect = 3.990e-59 Identity = 99/180 (55.00%), Postives = 121/180 (67.22%), Query Frame = 1
Query: 1 DYLTILPTMML-MEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
D+ TI L +D IGDYD++T+R V+ +C DGDHL A SSLDP+FWP HPTMERLFMF LTG +TD WPDS+ + D + G + E S Y D C+GH GSDVFPFG +D D FK +TG++G E GN LTNREVL +D R N L Y+YDNF W HC+QDG+DF D
Sbjct: 501 DWKTIYTNSTLDFDDVIGDYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSD-GNTVVETTSTYGDTCHGHGGSDVFPFGL-LDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYD 678
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 205 bits (522), Expect = 7.480e-59 Identity = 100/179 (55.87%), Postives = 123/179 (68.72%), Query Frame = 1
Query: 1 DYLTILPTMMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
DY I TM +++D IGDYD DT+R V++ +C DGDHLQASSSLDPSFW THPTMERL+M+ LTG +TD +WPD+D+T + G E LS Y ++C GH GSDVFPFG +DT GF+ +TGI + GN LTNRE L A DPR+N L Y+YD F+W HC DG DF D
Sbjct: 562 DYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPD-GTVVTESLSEYEESCFGHHGSDVFPFGL-LDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGD 738
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.230e-57 Identity = 99/179 (55.31%), Postives = 120/179 (67.04%), Query Frame = 1
Query: 1 DYLTILPTMMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
DY I + + + IGD D++ +R V +C +NDGDHLQASSSLDPSFWPTHPTMERL+M+ LTG +TD TWPD D+TV + G E +SLY D C GHRGSDVFPFG +D+ F +TGI+G GN LTNREVL A D R N L Y+YD F W HC DGV+F+D
Sbjct: 542 DYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPD-GTVEVESISLYGDTCTGHRGSDVFPFGL-LDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDD 718
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.670e-57 Identity = 100/179 (55.87%), Postives = 126/179 (70.39%), Query Frame = 1
Query: 1 DYLTILPTMMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
DY +I ++ ++D IGD+D D +R V+ LC NDGDHLQASSSLDPSF+ THPTMERL+M+ LTG +TD TWPD D+T+ + G E LSLY + C GH GSDVFPFG +D+ GF+ +TG+KG E+G N+LTNRE+L A D R N +SY+YD F W HC DG DFND
Sbjct: 577 DYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPD-GTVEVESLSLYGETCQGHGGSDVFPFGI-LDSDTDGFEVKTGVKGMENG-NTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFND 752
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 197 bits (500), Expect = 8.810e-56 Identity = 96/181 (53.04%), Postives = 127/181 (70.17%), Query Frame = 1
Query: 1 DYLTILPTMMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGF-AMDTGDPGFKARTGIKGEE-SGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
DYL I +M+ M++ +GD DE+T+R ++ +C N+GDHLQ+SSSLDPSFW THPTMERL+M+ LTG +TD WPD+D+T + G + ++ +S YS+ C GHRGSDVFPF A + D F +TGIKG GGN++TNREVL A DPR+N L Y+YD F+W HC +DG D D
Sbjct: 524 DYLQIFESMVFMKELMGDSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASD-GTTYSQPISKYSEECLGHRGSDVFPFDILANEVND--FTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRD 701
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 195 bits (495), Expect = 4.010e-55 Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 37 EDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFN 534
++ I DYD++T+R V+ +C +DGDHLQA SSLDP+FWP HPTMERLFMF RLTG DL WPD+D S+NE++S Y D C GH GSDVFPF +D+ GF+ +TG+KG GNS TNREVL A+DPRVN+LSY+YD F W HC+ G DF+
Sbjct: 552 DNVISDYDDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPDAD--------ASSSNEMISRYGDDCVGHGGSDVFPFNL-LDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFD 708
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 190 bits (483), Expect = 9.970e-54 Identity = 89/167 (53.29%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 37 EDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTMERLFMFKRLTGTMTDLTWPDSDITVVDEETGESTNEILSLYSDACNGHRGSDVFPFGFAMDTGDPGFKARTGIKGEESGGNSLTNREVLLAIDPRVNRLSYIYDNFDWPHCIQDGVDFND 537
+D IGDYD++T+R V+ +C DGDHL A SSLDP+FW HPTMERLFMF LTG +TD WPDS+ + D + G E +Y D C+GH GSDVFPF +D D F+ +TG+ G GN LTNREVL +D R N L Y+YDNF W HC++DG+DF D
Sbjct: 516 DDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSD-GNIVVETTGIYGDTCHGHGGSDVFPFDL-LDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFED 680 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115473.1225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115473.1225.1 >prot_H-elongata_contig115473.1225.1 ID=prot_H-elongata_contig115473.1225.1|Name=mRNA_H-elongata_contig115473.1225.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp MMLMEDFIGDYDEDTQRAVIDTLCQGLSNDGDHLQASSSLDPSFWPTHPTback to top mRNA from alignment at H-elongata_contig115473:669..1570- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115473.1225.1 ID=mRNA_H-elongata_contig115473.1225.1|Name=mRNA_H-elongata_contig115473.1225.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=902bp|location=Sequence derived from alignment at H-elongata_contig115473:669..1570- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115473:669..1570- >mRNA_H-elongata_contig115473.1225.1 ID=mRNA_H-elongata_contig115473.1225.1|Name=mRNA_H-elongata_contig115473.1225.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig115473:669..1570- (Himanthalia elongata Himel1 dioecious)back to top |