prot_H-elongata_contig50097.12235.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50097.12235.1
Unique Nameprot_H-elongata_contig50097.12235.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A6H5KS53_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS53_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 5.600e-47
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0
Query:    3 GAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            GA DTVYAGETYR+RIRFP NYPIE+PEVVFVP APLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCT K
Sbjct:   20 GAADTVYAGETYRIRIRFPANYPIEAPEVVFVPTAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 98          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A1D1ZE26_9ARAE (Putative ubiquitin-conjugating enzyme E2 16 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZE26_9ARAE)

HSP 1 Score: 127 bits (320), Expect = 2.020e-36
Identity = 55/81 (67.90%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            VIGA  T+YAGETY++++ FP +YP+E+P+V+F+ P PLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS T K
Sbjct:    9 VIGATGTLYAGETYQLQVDFPEHYPMEAPQVIFLQPVPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTAK 89          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A2C9VWK6_MANES (UBC core domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VWK6_MANES)

HSP 1 Score: 128 bits (321), Expect = 2.290e-36
Identity = 56/82 (68.29%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCKV 82
            V GA  T+YA ETY++++ FP +YP+E+P+V+F+PPAPLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS T KV
Sbjct:   50 VNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSATAKV 131          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A1Y2EQE3_9FUNG (Ubiquitin-conjugating enzyme n=2 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2EQE3_9FUNG)

HSP 1 Score: 128 bits (322), Expect = 2.310e-36
Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCKVN 83
            +IGA DT+Y GET+ ++  F  NYPI+SPEVVF+   P+HPHIY+NGHICLSILYD+WSPALT+ SVCLSI+SMLSSCT KV+
Sbjct:   39 IIGAKDTLYEGETFTLKFSFSKNYPIDSPEVVFINHIPVHPHIYSNGHICLSILYDQWSPALTVTSVCLSIISMLSSCTRKVH 121          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: B9R805_RICCO (Ubiquitin-conjugating enzyme E2-18 kDa, putative n=6 Tax=Pentapetalae TaxID=1437201 RepID=B9R805_RICCO)

HSP 1 Score: 129 bits (323), Expect = 2.380e-36
Identity = 55/81 (67.90%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            V GA  T+YA ETY++++ FP NYP+E+P+V+F+PPAPLHPHIY+NGHICL ILYD WSPA+T+ S+C+SILSMLSS T K
Sbjct:   50 VNGAPGTLYANETYQLQVDFPENYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSATVK 130          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A7C9ARC2_OPUST (E2 ubiquitin-conjugating enzyme n=3 Tax=Spermatophyta TaxID=58024 RepID=A0A7C9ARC2_OPUST)

HSP 1 Score: 127 bits (320), Expect = 2.980e-36
Identity = 55/81 (67.90%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            V GA  T+YA ETY++++ FP +YP+E+P+V+FVPPAPLHPHIY+NGHICL ILYD WSPA+T+ S+C+SILSMLSS T K
Sbjct:   22 VTGAPGTLYANETYQLQVDFPEHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTSK 102          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A161ZR94_DAUCS (UBC core domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161ZR94_DAUCS)

HSP 1 Score: 128 bits (322), Expect = 3.380e-36
Identity = 57/81 (70.37%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            VIGA  T+Y+ ETY++++ FP +YP+E+P+VVF+PPAPLHPHIY+NGHICL ILYD WSPA+T+ SVCLSILSMLSS T K
Sbjct:   50 VIGAPGTLYSNETYQLQVDFPEHYPMEAPQVVFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSTEK 130          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A835RPG3_VANPL (UBC core domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RPG3_VANPL)

HSP 1 Score: 129 bits (325), Expect = 4.220e-36
Identity = 56/81 (69.14%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            ++GA  T+YA ETY++++ FP +YP+E+P+VVFVPPAPLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS T K
Sbjct:   52 LVGAAGTLYANETYQLQVDFPEHYPMEAPQVVFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVK 132          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A7J7DLH0_TRIWF (Ubiquitin conjugating enzyme n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DLH0_TRIWF)

HSP 1 Score: 128 bits (322), Expect = 4.770e-36
Identity = 57/82 (69.51%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCKV 82
            V GA  T+YA ETY++++ FP +YP+E+P+VVFVPPAPLHPHIY+NGHICL ILYD WSPA+T+ S+C+SILSMLSS T KV
Sbjct:   22 VNGAPGTLYANETYQLQVDFPDHYPMEAPQVVFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTLKV 103          
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Match: A0A835RPT5_VANPL (UBC core domain-containing protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RPT5_VANPL)

HSP 1 Score: 129 bits (325), Expect = 5.240e-36
Identity = 56/81 (69.14%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTCK 81
            ++GA  T+YA ETY++++ FP +YP+E+P+VVFVPPAPLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS T K
Sbjct:   52 LVGAAGTLYANETYQLQVDFPEHYPMEAPQVVFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVK 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50097.12235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS53_9PHAE5.600e-4792.41UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A1D1ZE26_9ARAE2.020e-3667.90Putative ubiquitin-conjugating enzyme E2 16 (Fragm... [more]
A0A2C9VWK6_MANES2.290e-3668.29UBC core domain-containing protein n=1 Tax=Manihot... [more]
A0A1Y2EQE3_9FUNG2.310e-3669.88Ubiquitin-conjugating enzyme n=2 Tax=Neocallimasti... [more]
B9R805_RICCO2.380e-3667.90Ubiquitin-conjugating enzyme E2-18 kDa, putative n... [more]
A0A7C9ARC2_OPUST2.980e-3667.90E2 ubiquitin-conjugating enzyme n=3 Tax=Spermatoph... [more]
A0A161ZR94_DAUCS3.380e-3670.37UBC core domain-containing protein n=2 Tax=Daucus ... [more]
A0A835RPG3_VANPL4.220e-3669.14UBC core domain-containing protein n=1 Tax=Vanilla... [more]
A0A7J7DLH0_TRIWF4.770e-3669.51Ubiquitin conjugating enzyme n=1 Tax=Tripterygium ... [more]
A0A835RPT5_VANPL5.240e-3669.14UBC core domain-containing protein n=2 Tax=Vanilla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 1..82
e-value: 0.0014
score: 14.5
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..80
NoneNo IPR availablePANTHERPTHR24068:SF198coord: 1..80
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..83
e-value: 4.5E-35
score: 122.5
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..81
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 1..79
e-value: 2.1E-27
score: 95.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..77
score: 22.617
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 39..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50097contigH-elongata_contig50097:120..977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50097.12235.1mRNA_H-elongata_contig50097.12235.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50097 120..977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50097.12235.1 ID=prot_H-elongata_contig50097.12235.1|Name=mRNA_H-elongata_contig50097.12235.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
VIGAVDTVYAGETYRMRIRFPTNYPIESPEVVFVPPAPLHPHIYTNGHIC
LSILYDEWSPALTIQSVCLSILSMLSSCTCKVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS