mRNA_H-elongata_contig11541.1223.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11541.1223.1
Unique NamemRNA_H-elongata_contig11541.1223.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 1.960e-178
Identity = 305/496 (61.49%), Postives = 365/496 (73.59%), Query Frame = 3
Query:  189 KAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDAR-RLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIR--KFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHADLTQVAPYACKPLASAVNKRWFNKRYDSPATENT-DFVFDMQMVLHPTTADLQYVDRLASTAEHAAIVNKTVTNKVIALAVELAKTEA*RTEDRGGGQGSPTAKRAHSAAA-GSVHPMFHQPGNKNEAATTARYFSLGLFKT--GGGSAAP-PTIEESVRAELKTLKGSD-GWHTDDRAKLLGCAHVVK 1649
            +AE+ A++ G   LH +L+LWVDK S+LM MGVRLFYI+R W L+SRL+AVRQFNPT EM E+ RLS +LE+YL  V EEF LDV+M+FSAT DAG D + RLC  L+P LW+ CVCHMLNC+LVEAIGT V+S+K  N AARKVV+ VKKVVEHIR  K P AKA F+EE+VRHYSQC HRKLVNV PQRW  V  VLE  IVNR  IDGVY +EG  N L  + +EI+ELYS IKPVA+LIVTCQQTHVPTGQAAVLGLA LKLSTFNVD+ LD+LT VR  AQG   G GGGE+KA+S P+ H  LTQV   A + LASA+++R+F++ Y S  +E T DFVFDMQM LHPTTADLQYVD+L ST  HAA V K++T+K+IALAVELA+ E  R +  G  Q    AKRA  AAA GS+     +  NK + A TA++ SLGLFK   GGG A+  PT E   RAEL+TL+G + G  TDD    L C  V++
Sbjct:   61 QAEITAEVGGVPRLHLDLDLWVDKSSTLMFMGVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQ-AGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDD----LSCEGVLE 549          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 2.810e-153
Identity = 265/483 (54.87%), Postives = 316/483 (65.42%), Query Frame = 3
Query:  210 IAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHADLTQVAPYACKPLASAVNKRWFNKRYDSPATENTDFVFDMQMVLHPTTADLQYVDRLASTAEHAAIVNKTVTNKVIALAVELAKTEA*RTEDRGGGQGSPTAKRAHSAAA-GSVHPMFHQPGNKNEAATTARYFSLGLFKTGGG--SAAPPTIEESVRAELKTLKGSDGWHTDDRAKLLGCAHVVK 1649
            I G RLLH NL+LWVDKFSSL  +G+RLFY +R W LRSRLIAVRQFNPT E++E  RLS LL++YL +V EE+ LDV+++FSAT DAG D +RLCD+LLPGLWE CVCHM+NC LVEA GTHV+  KS N  ARKV+  VKKVVEHIRK P+AKA F+EE+V+ Y+QC HRKLVN  PQRW  V NVLE VIVNRAAIDGVY  EGK + L +  +EI+ELYS IKP A +IV CQQT VPTGQ AVL LAALKL T NVDSPL+ILT  RKLAQ    G GGGE+ A+S P+ H+  T VA    + +  +V+  WF+KRY S  +++TD+V   +    P T       RL   A H   V+ T      A                      P AKRA  AAA GSVHP+F  P NK E ATT  Y SLGLF  GG   +  PP+ E++ RAEL  L+   G      A  L C  V+K
Sbjct:  158 IGGMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYVSTCRW---PCTRP-----RLTCAALHTGDVSTTPAGSAAA--------------------DEPAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSL---APGLSCEDVLK 609          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 3.790e-150
Identity = 261/470 (55.53%), Postives = 327/470 (69.57%), Query Frame = 3
Query:  189 KAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHADLTQVAPYACKPLASAVNKRWFNKRYDSPATENTDFVFDMQMVLHPTTADLQYVDRLASTAEHAAIVNKTVTNKVIALAVELAKTEA*RTEDRGGGQGSPTAKRAHSAAA-GSVHPMFHQPGNKNEAATTARYFSLGLFKTGG-GSAAPPTIEESVRAELKTLKGS 1592
            K EMA ++AG   LH +L LWVDK SSL  MGVR FY+N +W+L+S L+AVRQFNPT E +++ RLS LLE+Y+  V EEF +D +++FSAT DAG D +RLC +LLPGL E CVCHML+ +L EA+GT V  Q+   RAAR VV+ VKK VE +RK P +K  F EE+V  +SQCS+RK+VN  PQRW  V   LE  + NRAAI+GVY +EG+ + L  +V EI+ELYS I+PVA++I TCQQTH PTGQAAVLGLAALKLST N D+PLDILT   K  QG   GAGG EQ+ ++  +AH DLT+V   A + LASA++ R F+KRY S   ++T  VFDMQM LHP TADLQYV RLA T  HAA+V K +T+K+IALA +LA  +A R       QG P AKRA  A+A G+ +PMF       EA TTA    LGL  T   G++A P   E  RAEL+TL+ +
Sbjct:  172 KEEMATEVAGVPCLHLSLELWVDKSSSLKYMGVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGG-EQRTTA--RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEAE-QGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPI--ERARAELETLRSA 635          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 375 bits (963), Expect = 6.260e-120
Identity = 215/462 (46.54%), Postives = 273/462 (59.09%), Query Frame = 3
Query:  282 GVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHADLTQVAPYACKPLASAVNKRWFNKRYDSPATENTDFVFDMQMVLHPTTADLQYVDRLASTAEHAAIVNKTVTNKVIALAVELAKTEA*RTEDRG------GGQGSPTAKRAHSAAAGSVHPMFHQPGNKNEAATTARYFSLGLFKTGGGSAAPPTIEESVRAELKTLKGSDGWHTDDRAKLLGCAHVVK 1649
            G+RL+Y++R W LRSRLIAVRQFNPT E++E  RLS LL++YL  V  E+ LDV+++FSAT DAG D +RLCD+LLPGLWE CVCHM+NC +V+A G HV+  KS N  ARKV+  VK +VEHIRK P+AKA F+EE+VR Y+QC HRKLVN  PQRW  V NVLE VIVNR AIDGVY  EGK++ L +  DEI+EL+  IKP A +IV+                                                 GE+ A+S P+ H+ LT VA    + +  +V+ RWF+KRY S  +++TD+VFDMQM LHPTTADL+YVD+LAST+  A  V  T+T+KVI+LAV+LA+  A  T D             P AKRA  AAA         PG+K E                     PP+ E++ RAEL  L+   G      A  L C  V+K
Sbjct:    3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVS-------------------------------------------------GERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAA---------PGSKEE---------------------PPSFEQTARAELTKLRAVQGGSL---AAGLRCEDVLK 382          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 5.750e-100
Identity = 206/369 (55.83%), Postives = 240/369 (65.04%), Query Frame = 3
Query:  564 AIGTHVNSQKSANRAARKVVVLVKKVVEHIRKF--PKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHADLTQVAPYACKPLASAVNKRWFNKRYDSPATENTDFVFDMQMVLHPTTADLQYVDRLASTAEHAAIVNKTVTNKVIALAVELAKTEA*RTEDRGGGQGSPTAKRAHSAAAG-SVHPMFHQPGNKNEAATTARYFSLGLFK---TGGGSAAPPTIEESVRAELKTLKGSD-GWHTDDRAKLLGCAHVVK 1649
            AIGT V+S+K  NRAARK+V+ VKKVVEHIRK   P A+A F+EE+VRHYSQC HRKLVNV PQRW  V  VLE  IVNR  IDGVY +EG  N L  +  +I+ELYS IKPVA+LIVT QQTHVPTGQAA LGLAALKLSTFNVD+ LD+LT  R  AQG   GAGG E KA+S P+ +           KP  SA               + TDFVFDMQM LHPTTADLQYVD+LAS+  HAA V K +T+K+I LAVELA  E  R +  G  Q    AK+A  AAA  S HP   +  NKNE A TA++ SL LFK    G  ++  PT E    AE +TL+G + G  TDD    LGC  V+K
Sbjct:   13 AIGTRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVEPKATSVPRCY-----------KPADSA---------------KTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMERKQ-AGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDD----LGCEGVLK 348          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 8.780e-93
Identity = 146/229 (63.76%), Postives = 182/229 (79.48%), Query Frame = 3
Query:  189 KAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEEL 875
            K EMAA+I G RLLH +L+LWVDKFSSL  +G+ LFY++R W LRSRLIAVRQFNPT E++E  RLS L++++L +V EE+ LDV+++FSAT D+G D +RLCD+LLPGLWE CVCHM+NC LVEA GTHV+S KS N  ARKV+ + KKVVEHI K P+AKA F++E+VR Y+QC HRKLVN  PQRW  V NVLE VIVNRAA++ VY  EGK + L +  +EI+EL
Sbjct:  225 KMEMAAQIGGMRLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 3.100e-82
Identity = 139/231 (60.17%), Postives = 170/231 (73.59%), Query Frame = 3
Query:  189 KAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSAN-RAARKVVVLVKKVVEHIR-KFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEEL 875
            K EMAA+I G RLLH NL+LWVDKFSSL  +G+RLFY++R W LRSRLIAVRQFNPT E++E  RLS LL++YL +V EE+ LDV+++FSAT DAG D +RLCD+LLPGLWE CVCHM+NC LVEA GTHVN  KS N R  +      K    H +    +  A F++E+VR Y+QC HRKLVN  PQRW  V NVLE VIVNRAA++ VY  EGK + L +  +EI+EL
Sbjct:   72 KMEMAAQIGGMRLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSEVGAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.100e-81
Identity = 160/293 (54.61%), Postives = 186/293 (63.48%), Query Frame = 3
Query:  189 KAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGE 1067
            K EMAA+I G RLLH N +LWVDKFSSL  +G+RLFYI+R W LRSRLIAVRQFNPT E++E  RL  LL++YL +V EE+ LDV+++FSAT DAG DA                            GTHV+  KS +   RKV+  VK V+EHIRK P+AK  F                  VI    C V NVLE VIVNRAAIDGVY  EGK + L +  DEI+EL+S IKP A +IV CQQT VPT Q AVL LAALKL+T NVDSPL+ILT  RKLAQ G  G GG E
Sbjct:   53 KMEMAAQIGGMRLLHLNRDLWVDKFSSLKCIGIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSDA---------------------------FGTHVDPAKSRSPVVRKVIATVKMVMEHIRKSPRAKVSF----------------AVVI---GCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGRE 299          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 5.800e-61
Identity = 161/464 (34.70%), Postives = 239/464 (51.51%), Query Frame = 3
Query:  162 DVLRDHCSVKAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDARRLCDILLPGLWE*CVCHMLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKEEKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGK--EGKYNQLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFNVDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHAD-LTQVAPYACKPLASAVNKRWFNKRYDSP--ATENTDFVFDMQMVLHPTTADLQYVDRLASTAEHAAIVNKTVTNKVIALAVELAKTEA*RTEDRGGGQGSPTAKRAHSAAAGSVHPMFHQPG--NKNEAATTARYFSLGLFKTGGGS 1532
            D      S     A   AGG +LH N +LW  K+S+   +G+RLF+    + L S L+AV+ F P++++  S +LS +L  ++  V +EF LD N +F    DAG D +RLC  +L   WE C  HMLNC LVEA GT+ +     N  AR+V+  VKKVVEH+ K    KA + + +V  Y +    KLVN +P RW S CNVLEE++ +  A++  Y K  +G    L  +   IEELYS +KP++ ++   Q+  +PTG +    L  L+  T +V  PL++ T+ RK+              A++  +  AD L  V       LA+A++KR+F+KRYD+   A   +D+VF+M   + P    L ++  + S+ E A  V+K +  KV+ L V+LA       E  G   G  T      A+A +  P     G      +  T R    G+F   GGS
Sbjct:  224 DATVSKFSYSIRKAITGAGGAVLHANFDLWTSKWSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSKQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNLGARQVIDTVKKVVEHLNKSTLMKARYDDIQVLLYGKSM--KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGSFPLAQHKTVIEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEV-TVPRKVTT-----TDWARTLATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLA-------EGAGAYPGKATEGDTSGASASAPPPFKRSRGPLTVGTSERTKRLLKSGVF---GGS 669          
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.770e-32
Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 3
Query:  189 KAEMAAKIAGGRLLHFNLNLWVDKFSSLMNMGVRLFYINRIWELRSRLIAVRQFNPTSEMVESGRLSVLLEEYLPTVFEEFNLDVNMIFSATCDAGRDAR-RLCDILLPGL 518
            KAE+AA++ G   LH +L LWVDK S+LM MGVRLFYI+R W LRSRL+AVRQFNPT EM E+ RLS LLE++L  V E F LDV M+FSAT DAG D + RLC IL+P L
Sbjct:   74 KAEIAAEVGGVPRLHLDLELWVDKSSTLMFMGVRLFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVLE-FGLDVYMLFSATSDAGSDVKHRLCYILIPRL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11541.1223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LBK4_ECTSI1.960e-17861.49Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE2.810e-15354.87Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LFP4_ECTSI3.790e-15055.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE6.260e-12046.54Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEK6_9PHAE5.750e-10055.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWS6_9PHAE8.780e-9363.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEC8_9PHAE3.100e-8260.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM59_9PHAE1.100e-8154.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVU5_9PHAE5.800e-6134.70Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KHW5_9PHAE2.770e-3264.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11541contigH-elongata_contig11541:2545..5440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1974
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11541.1223.1prot_H-elongata_contig11541.1223.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11541 3336..4830 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929668.987183-UTR-H-elongata_contig11541:2544..28261622929668.987183-UTR-H-elongata_contig11541:2544..2826Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11541 2545..2826 +
1691679112.8329482-UTR-H-elongata_contig11541:2544..28261691679112.8329482-UTR-H-elongata_contig11541:2544..2826Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11541 2545..2826 +
1622929669.0081081-UTR-H-elongata_contig11541:3078..33351622929669.0081081-UTR-H-elongata_contig11541:3078..3335Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11541 3079..3335 +
1691679112.8424482-UTR-H-elongata_contig11541:3078..33351691679112.8424482-UTR-H-elongata_contig11541:3078..3335Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11541 3079..3335 +
1622929669.0826168-UTR-H-elongata_contig11541:4830..54401622929669.0826168-UTR-H-elongata_contig11541:4830..5440Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11541 4831..5440 +
1691679112.8898919-UTR-H-elongata_contig11541:4830..54401691679112.8898919-UTR-H-elongata_contig11541:4830..5440Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11541 4831..5440 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929669.024176-CDS-H-elongata_contig11541:3335..33591622929669.024176-CDS-H-elongata_contig11541:3335..3359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11541 3336..3359 +
1691679112.8516314-CDS-H-elongata_contig11541:3335..33591691679112.8516314-CDS-H-elongata_contig11541:3335..3359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11541 3336..3359 +
1622929669.040164-CDS-H-elongata_contig11541:3901..40121622929669.040164-CDS-H-elongata_contig11541:3901..4012Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11541 3902..4012 +
1691679112.863029-CDS-H-elongata_contig11541:3901..40121691679112.863029-CDS-H-elongata_contig11541:3901..4012Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11541 3902..4012 +
1622929669.0638661-CDS-H-elongata_contig11541:4140..48301622929669.0638661-CDS-H-elongata_contig11541:4140..4830Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11541 4141..4830 +
1691679112.872354-CDS-H-elongata_contig11541:4140..48301691679112.872354-CDS-H-elongata_contig11541:4140..4830Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11541 4141..4830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11541.1223.1

>prot_H-elongata_contig11541.1223.1 ID=prot_H-elongata_contig11541.1223.1|Name=mRNA_H-elongata_contig11541.1223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=275bp
MLNCTLVEAIGTHVNSQKSANRAARKVVVLVKKVVEHIRKFPKAKAFFKE
EKVRHYSQCSHRKLVNVIPQRWCSVCNVLEEVIVNRAAIDGVYGKEGKYN
QLMAYVDEIEELYSPIKPVADLIVTCQQTHVPTGQAAVLGLAALKLSTFN
VDSPLDILTLVRKLAQGGAVGAGGGEQKASSAPKAHADLTQVAPYACKPL
ASAVNKRWFNKRYDSPATENTDFVFDMQMVLHPTTADLQYVDRLASTAEH
AAIVNKTVTNKVIALAVELAKTEA*
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mRNA from alignment at H-elongata_contig11541:2545..5440+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11541.1223.1 ID=mRNA_H-elongata_contig11541.1223.1|Name=mRNA_H-elongata_contig11541.1223.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2896bp|location=Sequence derived from alignment at H-elongata_contig11541:2545..5440+ (Himanthalia elongata Himel1 dioecious)
TGTATGGGGATGCACTGGGTGAAGAAATACATTGTCCAGGGTTTCTACCC GCTCTCGCACGGCGAGAAGGAGTGGGTGCGGGCGAACTGGAGGCTGAGCG CTGTGAAGGAGTTCCCCGTGACTGGCCTCCACAACCAAGCGGTGAAGCAC AAGATCATCGAGATGTACTCCGCGATCACTGCTCAGTCAAGGCGGAGATG GCCGCCAAGATTGCCGGCGGACGGCTTCTACACTTTAACCTCAACCTCTG GGTGGACAAGTTCTCGAGTTTGATGAACATGGGTAAGCAACGGGTGACCG GTATTGCTTTCTCTAGACGATCGTAAATCTAAATCTATATCGCAGGGTAG CGAATTTTTCGATAGCTAAGGTGAAGATGTCCCCCTTGTGCCGTTGATTT GTTTGTGGGAAAATGTAAATGCAATGTACGTAAATGAGATATTGAACGAC TCACGGTCGTCTCCCATCAGCATAATTTATTTATCATACAATGCACGTGC GGCGTGTGTACCGCCCCCGATGTTTTCAATCCAGGTGTTCGGTTGTTCTA CATCAACCGGATTTGGGAGCTGAGATCGCGCCTCATCGCCGTTCGACAGT TCAACCCCACGTCGGAGATGGTTGAAAGCGGCCGCCTCTCTGTGCTTCTC GAGGAGTACCTTCCGACCGTGTTCGAGGAGTTCAACCTCGACGTCAACAT GATCTTCTCAGCAACATGCGACGCCGGCAGGGATGCGAGGCGGCTCTGCG ATATACTGCTGCCGGGGCTATGGGAGTAGTGCGTGTGCCACATGCTTAAC TGTACTCTGGTCGAGGTGCGTTTCTGGACTGCATACGGCAATAATTTTCT GCTGGAAGAGCAAAGACTCGATCTTTAATATCCTCGTGGTTGTGAGCAAC GTTGATTAGTGTCGCGAGGAAGGTTTAAGGTTGCCTTTTTGTGATATATT TGGTGTTGAAATTATCTGTGTGTTGTTGCCGCGTGCTCTCCCCCCGTGCA GGCTCGAGCGCTGAAACGTCACTGTTTCCGGAGAAAAATAGTTGCTCCTT TTCATAAAGTGTTAGTGTTTTATTTCATGATTACGCATGCATGTTGTCAG CAACGCACCCGAAATACCAGGAAACACCTATTCATGTACGTATGTCAAGT GCGTTGATAGTTGTTGTGTAATATTTTGACGTGTCTCCAGCGTGCGTTGT ACACAATCGTCGTCGATATGGTAGTCTAAGTTTGTCCTTGTGAACAAAGA GGCCCCCCCCCTCTGACCAACCCCCACACAGAAAATGGTATTCCTGTGCT TCATGTCGTCTCGCGATTTCAACATTTACGTTTTACATTTGCGCTGTGTA ACCACAGGCCATCGGTACACACGTAAACTCGCAGAAGTCGGCCAATCGCG CCGCGCGCAAAGTCGTCGTGTTGGTGAAGAAGGTCGTCGAGCACATTCGC AAGTTTCCCAAAGCAAAGGTGAACGTGCCTGTTATGATAGTGCTATTAAT GTGCGTGTGTGTGAGGTTCGCAAGTGCTCTGTCCTACCTGCTCTGACGTA CCAACATCTCGTCCATCCCCCGCCCCGCACCTACTAATACGAAAAGGCTT TCTTCAAGGAGGAGAAAGTTCGGCACTACTCGCAGTGTTCACACCGCAAG CTGGTCAACGTGATACCGCAGCGATGGTGTAGTGTGTGCAACGTCCTGGA GGAAGTCATCGTCAACCGTGCTGCCATCGACGGGGTTTATGGCAAGGAAG GCAAATATAACCAGCTAATGGCGTATGTGGACGAGATCGAGGAGTTGTAC TCCCCCATCAAGCCGGTTGCGGACCTCATCGTCACGTGTCAGCAAACGCA TGTCCCCACGGGACAAGCCGCGGTGCTCGGTCTGGCGGCGCTCAAGCTCA GCACGTTCAATGTCGACTCCCCGCTCGACATCCTGACGCTGGTGCGTAAG CTTGCACAGGGTGGGGCGGTAGGCGCGGGCGGCGGGGAACAGAAGGCCTC CAGCGCTCCCAAGGCGCATGCCGACTTGACTCAGGTGGCCCCCTACGCTT GCAAGCCTCTCGCCTCCGCTGTCAACAAGCGGTGGTTCAACAAGCGGTAC GATTCGCCGGCAACCGAAAACACCGACTTCGTGTTTGACATGCAGATGGT CCTACACCCGACTACGGCGGACCTCCAGTACGTGGACAGGCTCGCTTCGA CAGCCGAGCATGCTGCTATTGTAAACAAGACCGTCACCAACAAGGTCATT GCTTTGGCTGTGGAGCTGGCGAAGACGGAAGCATAACGGACGGAAGACAG GGGAGGGGGGCAAGGCTCACCAACTGCAAAGCGGGCGCACTCGGCGGCTG CCGGCAGCGTGCACCCAATGTTCCACCAGCCCGGAAACAAAAATGAGGCG GCGACTACAGCAAGATATTTCAGCCTGGGACTTTTTAAGACGGGGGGCGG GTCGGCAGCGCCGCCAACAATTGAGGAGAGCGTTCGAGCCGAGCTCAAGA CGCTTAAGGGGTCTGACGGCTGGCATACTGACGACCGAGCTAAGCTGCTA GGGTGTGCTCATGTGGTGAAAGAGATGAGAGAGCTCGTACCCACTCCTGG CCCGGGAAGCTCGTGTGGTGTTCGGAGATCCAGCGTCGTCGGCGGTGCTT GAGCGCAATTTCAGCGATGCTGGGCACATGACGACGTCATCGAGAAGCTC CACCGATGCCAAATACGTGGACATGATCCTTTTTTTGCACGGAAACCTGG ACCTCATTTTCGAGGACATTGCAGAGCTGCCAGCCGACGGGGTCAACGGT GCGTAAAGCAAAATTCCCGGGCGGTTGTTCAACCCGCTGCCGGAGCTGCA AGGGCTAGCCAGTGCATTCGTCACAGTGGACTTGACCGAGGAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig11541:2545..5440+

>mRNA_H-elongata_contig11541.1223.1 ID=mRNA_H-elongata_contig11541.1223.1|Name=mRNA_H-elongata_contig11541.1223.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1650bp|location=Sequence derived from alignment at H-elongata_contig11541:2545..5440+ (Himanthalia elongata Himel1 dioecious)
ATGCTTAACTGTACTCTGGTCGAGATGCTTAACTGTACTCTGGTCGAGGC
CATCGGTACACACGTAAACTCGCAGAAGTCGGCCAATCGCGCCGCGCGCA
AAGTCGTCGTGTTGGTGAAGAAGGTCGTCGAGCACATTCGCAAGTTTCCC
AAAGCAAAGGCCATCGGTACACACGTAAACTCGCAGAAGTCGGCCAATCG
CGCCGCGCGCAAAGTCGTCGTGTTGGTGAAGAAGGTCGTCGAGCACATTC
GCAAGTTTCCCAAAGCAAAGGCTTTCTTCAAGGAGGAGAAAGTTCGGCAC
TACTCGCAGTGTTCACACCGCAAGCTGGTCAACGTGATACCGCAGCGATG
GTGTAGTGTGTGCAACGTCCTGGAGGAAGTCATCGTCAACCGTGCTGCCA
TCGACGGGGTTTATGGCAAGGAAGGCAAATATAACCAGCTAATGGCGTAT
GTGGACGAGATCGAGGAGTTGTACTCCCCCATCAAGCCGGTTGCGGACCT
CATCGTCACGTGTCAGCAAACGCATGTCCCCACGGGACAAGCCGCGGTGC
TCGGTCTGGCGGCGCTCAAGCTCAGCACGTTCAATGTCGACTCCCCGCTC
GACATCCTGACGCTGGTGCGTAAGCTTGCACAGGGTGGGGCGGTAGGCGC
GGGCGGCGGGGAACAGAAGGCCTCCAGCGCTCCCAAGGCGCATGCCGACT
TGACTCAGGTGGCCCCCTACGCTTGCAAGCCTCTCGCCTCCGCTGTCAAC
AAGCGGTGGTTCAACAAGCGGTACGATTCGCCGGCAACCGAAAACACCGA
CTTCGTGTTTGACATGCAGATGGTCCTACACCCGACTACGGCGGACCTCC
AGTACGTGGACAGGCTCGCTTCGACAGCCGAGCATGCTGCTATTGTAAAC
AAGACCGTCACCAACAAGGTCATTGCTTTGGCTGTGGAGCTGGCGAAGAC
GGAAGCATAAGCTTTCTTCAAGGAGGAGAAAGTTCGGCACTACTCGCAGT
GTTCACACCGCAAGCTGGTCAACGTGATACCGCAGCGATGGTGTAGTGTG
TGCAACGTCCTGGAGGAAGTCATCGTCAACCGTGCTGCCATCGACGGGGT
TTATGGCAAGGAAGGCAAATATAACCAGCTAATGGCGTATGTGGACGAGA
TCGAGGAGTTGTACTCCCCCATCAAGCCGGTTGCGGACCTCATCGTCACG
TGTCAGCAAACGCATGTCCCCACGGGACAAGCCGCGGTGCTCGGTCTGGC
GGCGCTCAAGCTCAGCACGTTCAATGTCGACTCCCCGCTCGACATCCTGA
CGCTGGTGCGTAAGCTTGCACAGGGTGGGGCGGTAGGCGCGGGCGGCGGG
GAACAGAAGGCCTCCAGCGCTCCCAAGGCGCATGCCGACTTGACTCAGGT
GGCCCCCTACGCTTGCAAGCCTCTCGCCTCCGCTGTCAACAAGCGGTGGT
TCAACAAGCGGTACGATTCGCCGGCAACCGAAAACACCGACTTCGTGTTT
GACATGCAGATGGTCCTACACCCGACTACGGCGGACCTCCAGTACGTGGA
CAGGCTCGCTTCGACAGCCGAGCATGCTGCTATTGTAAACAAGACCGTCA
CCAACAAGGTCATTGCTTTGGCTGTGGAGCTGGCGAAGACGGAAGCATAA
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