mRNA_H-elongata_contig49961.12218.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A6H5JNH2_9PHAE (Sulf_transp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNH2_9PHAE) HSP 1 Score: 228 bits (581), Expect = 3.240e-71 Identity = 117/173 (67.63%), Postives = 137/173 (79.19%), Query Frame = 1
Query: 1 QSWKLVFMSGLTAGGVLAAVVYPEGLSQKGAPAVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGIASASVLAAWADSGERDDLV-TEESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHLASFLCGGMFAGGLVLSGMVQRAKVFNFLALR 516
+ WK++F+SG GGV+A +VYP GL Q GAPA+S L F V+G LVGLGTRLGSGCTSGHGLCGLPRLSRRS++A LTFLTSGIA+ASV AAW DS ++ T E+PMLA RY +L +A G + TL R+E A W+AHLASFLCGG FAGGLV+SGM QRAKV NFLALR
Sbjct: 48 RGWKVLFLSGFIVGGVVAGIVYPAGLDQTGAPALSLLRFAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATLTFLTSGIAAASVSAAWNDSASGGAVLETHETPMLAARYASLAAAAVGTLLTLTKREERAQWKAHLASFLCGGSFAGGLVISGMTQRAKVVNFLALR 220
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A6H5JTK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK9_9PHAE) HSP 1 Score: 120 bits (300), Expect = 8.230e-30 Identity = 81/162 (50.00%), Postives = 90/162 (55.56%), Query Frame = 1
Query: 145 GTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLT----------------------------------SGIASASVLAAWADSGERDD-LVTE---ESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHLASFLCGGMFAGGLVLSGMVQRAKVFNFLALR 516
G LGSGCTSGHGLCGLPRLSRRS++A LTFLT SGIA+ASVLAAW DS LVT E+P+LA +R+E A W+A+L SFLCGG FAGGLVLSGM QRAKV NFLALR
Sbjct: 31 GRWLGSGCTSGHGLCGLPRLSRRSIVATLTFLTRKLVTADVYGWFDILLFFMTDSICCCFSFFHRLISGIATASVLAAWNDSASGGAALVTHVRSETPVLA------------------AREERAQWKANLVSFLCGGSFAGGLVLSGMTQRAKVVNFLALR 174
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A2P6TJL1_CHLSO (3-phosphoshikimate 1-carboxyvinyltransferase n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJL1_CHLSO) HSP 1 Score: 107 bits (267), Expect = 7.960e-24 Identity = 70/181 (38.67%), Postives = 95/181 (52.49%), Query Frame = 1
Query: 1 QSWKLVFMSGLTAGGVLAAVVYPEGLSQKGAPAVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGIASASVLAAWADSGERDDLVTE-----------ESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHLASFLCGGMFAGGLVLSGMVQRAKVFNFLA 510
+ W+ F+ GL AG + +A VYPEG + S GLLVG+GT LGSGCTSGHG+CG+ RL+ RSL A TF+ SG+A+A++ + A +G T +P+L A+ + H+ S K A AS G +FA GL LSGM Q +KV FL+
Sbjct: 939 EGWRYAFLGGLAAGALASASVYPEGFFHF-PESYSLARAAAGGLLVGVGTSLGSGCTSGHGVCGIARLAPRSLAATGTFMASGVATAALAGSLAATGVDPAATTPLALMTTQQWQVAAPLLGGSLAAVALLRGAATHSAPSSKPLLGQAAEFAS---GAIFAAGLALSGMCQPSKVVGFLS 1115
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: Q24C86_TETTS (YeeE/YedE family protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24C86_TETTS) HSP 1 Score: 101 bits (251), Expect = 2.000e-22 Identity = 68/186 (36.56%), Postives = 107/186 (57.53%), Query Frame = 1
Query: 1 QSWKLVFMSGLTAGGVLAAVVYP-----EGLSQKGAPA---VSTL---GFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSG--IASASVLAAWADSGERDDLVT--EESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHLASFLCGGMFAGGLVLSGMVQRAKVFNFLAL 513
WK+ +SG+ + +++ EG + +P VS+L GF ++GLLVG+GT+LG+GCTSGHG+CGLPR S RS +AV F+ G +AS + + D + ++V+ + + ++ I AL + G V L + E+ + SF+ G +FA GLV+SGM++R KV FLA+
Sbjct: 48 SKWKISLLSGMAITSCVFWLIFKFDPVNEGKTYIFSPPQALVSSLDIFGFALAGLLVGIGTKLGNGCTSGHGVCGLPRFSVRSFVAVFFFMAFGFGVASLRLYHPFLDDSDGLNVVSKIDYNVLVPIMLAALCIFFVGYVFYLYRQYEYVDISEIVVSFITGVIFASGLVVSGMIKREKVLGFLAI 233
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: W7TM39_9STRA (Sulf_transp domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM39_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.370e-22 Identity = 66/143 (46.15%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 115 FVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGIASASVLAAWADSGER---------DDLVTEESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHLASFLCGGMFAGGLVLSGMVQRAKVFNFLALR 516
+V+SGLLVG GTRLG+GCTSGHG+CGL RLS+R +AV+TF++ G+A AS L A R D + P + L ++ L+H L +K H HLA+FL G +FA GL LSGM Q KV +FL LR
Sbjct: 95 YVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRL-GQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLR 236
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A8J5XUX3_DIALT (Sulf_transp domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUX3_DIALT) HSP 1 Score: 101 bits (251), Expect = 3.500e-22 Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 1
Query: 1 QSWKLVFMSGLTAGGVLAAVVYPEGLSQKGAPAVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGIASASVLAAWADSGERDDLVTEESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHLA---------SFLCGGMFAGGLVLSGMVQRAKVFNFL 507
+ W++ F++G+ L A + PE + A S L V+G LVG GT+LGSGCTSGHG+CGLPR SRRSL+AV TF+ G+ +AS + A G R L T P A+ L + R A+ + LA S G +FA GL +SGM + ++V FL
Sbjct: 64 RHWRVAFLAGMGVASALVARLLPEAFAAD-AQDPSPLAAFVAGALVGAGTKLGSGCTSGHGVCGLPRFSRRSLVAVCTFMAVGVITASTIGAL---GLRPALTTPAPPSAALSGAVAAXXXXXLAVLIGGRTPAANGKDELAPREHVDAALSAGLGALFAVGLSVSGMARPSRVLGFL 237
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A2T4VLV3_VITXG (YeeE/YedE family protein n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4VLV3_VITXG) HSP 1 Score: 92.8 bits (229), Expect = 5.510e-21 Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 7 WKLVFMSGLTAGGVLAAVVYPEGLSQKGAPAVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSG 249
W+L F++GL AGG+L V++P L P +G VV+GLLVG GTRLGSGCTSGHG+CGL R + RSL+A LTF+ +G
Sbjct: 48 WRLAFLAGLVAGGLLLRVLWPASLESSARP--GAIGLVVAGLLVGFGTRLGSGCTSGHGVCGLARGATRSLVATLTFMATG 126
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A6V1PAC3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PAC3_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 1.280e-20 Identity = 72/174 (41.38%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 7 WKLVFMSGLTAGGVLAAVVYPEGLSQK--GAP-AVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGIASASVLAAWADSGERDDLVTEESPMLAIRYTALGVSAAGLVHTLMSRKEWAHWRAHL-ASFLCGGMFAGGLVLSGMVQRAKVFNFLALR 516
WK F + A + A V+P L Q G+P + T G G LVG GTRLG+GCTSGHG+CGL RLS RS+ AV+TFLT+ IA+A L G + + P + Y A G A + E AH A L + +FA GL ++GM +RAK+ NFL LR
Sbjct: 57 WKAAFTASFMAMAQIVAKVWPSLLDQLNLGSPWYIMTFG----GFLVGYGTRLGNGCTSGHGICGLARLSSRSIAAVVTFLTAAIATARTLHGM--PGAHISADSWDQPSVTAFYAASGGLLALFALATVGPGE-AHRPARLLCTAAAAALFAAGLCVAGMGRRAKILNFLVLR 223
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A520MQT6_9GAMM (YeeE/YedE family protein n=1 Tax=Candidatus Thioglobus sp. TaxID=2026721 RepID=A0A520MQT6_9GAMM) HSP 1 Score: 90.1 bits (222), Expect = 6.310e-20 Identity = 47/88 (53.41%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 7 WKLVFMSGLTAGGVLAAVVYPEGLS---QKGAPAVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGIASA 261
W+ F++GL GGVL +PE L+ + PAV +++GLLVG+GTR+GSGCTSGHG+CG+ RLS+RS++AV+ FL+SGIA+A
Sbjct: 49 WRFAFLAGLVTGGVLLLGTFPETLNFTLKSSPPAV-----MLAGLLVGIGTRIGSGCTSGHGVCGIGRLSQRSMIAVVVFLSSGIAAA 131
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Match: A0A832F6K7_9DELT (YeeE/YedE family protein n=2 Tax=Nannocystis exedens TaxID=54 RepID=A0A832F6K7_9DELT) HSP 1 Score: 90.1 bits (222), Expect = 6.820e-20 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 7 WKLVFMSGLTAGGVLAAVVYPEGLSQKGAPAVSTLGFVVSGLLVGLGTRLGSGCTSGHGLCGLPRLSRRSLMAVLTFLTSGI 252
W+L F+ GL GG L +VYPE A + TL VV+GLLVG G RLG+GCTSGHG+CG+ R+SRRSL+A L FL++G+
Sbjct: 52 WRLAFLLGLIGGGGLLLLVYPEAFPTTVAASTPTL--VVAGLLVGFGARLGNGCTSGHGICGIGRMSRRSLVATLVFLSTGV 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49961.12218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49961.12218.1 >prot_H-elongata_contig49961.12218.1 ID=prot_H-elongata_contig49961.12218.1|Name=mRNA_H-elongata_contig49961.12218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp MSGLTAGGVLAAVVYPEGLSQKGAPAVSTLGFVVSGLLVGLGTRLGSGCTback to top mRNA from alignment at H-elongata_contig49961:950..3986- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49961.12218.1 ID=mRNA_H-elongata_contig49961.12218.1|Name=mRNA_H-elongata_contig49961.12218.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3037bp|location=Sequence derived from alignment at H-elongata_contig49961:950..3986- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49961:950..3986- >mRNA_H-elongata_contig49961.12218.1 ID=mRNA_H-elongata_contig49961.12218.1|Name=mRNA_H-elongata_contig49961.12218.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=990bp|location=Sequence derived from alignment at H-elongata_contig49961:950..3986- (Himanthalia elongata Himel1 dioecious)back to top |