prot_H-elongata_contig115353.1218.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115353.1218.1
Unique Nameprot_H-elongata_contig115353.1218.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: D8LEW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEW6_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 1.380e-81
Identity = 121/149 (81.21%), Postives = 136/149 (91.28%), Query Frame = 0
Query:    1 LKSQAGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEKVEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGLDK 149
            +  QAGAKPTTDFGACRDLQGRRLRHVNDE+RLQKWQE+RERE+RGEKVE+ KT SGIE WHLGVPTWAEG K S+MK+RRKT++CQQWLDARK+RKAP GAPPWWGCPRGRGCDFAHGKEELRGKGLEEF +K +++ REK+Q  LDK
Sbjct:  127 MAKQAGAKPTTDFGACRDLQGRRLRHVNDEVRLQKWQENRERESRGEKVEEEKTQSGIENWHLGVPTWAEGAKPSYMKTRRKTVICQQWLDARKDRKAPQGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFNQKDRKEKREKKQFDLDK 275          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A3R7I1I3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7I1I3_9STRA)

HSP 1 Score: 183 bits (464), Expect = 7.980e-52
Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TTDFGACRDL GRRLRHVN E+ + KW++D E     EK       V D  TPSGI GW+L  P+WAEGVK S+MK RR TMLC+ WL AR+  R AP+GAP WWGCPRGR CDFAHG+EELRG+GL EFKR ++Q+ +   Q  L
Sbjct:   92 SGAKATTDFGACRDLHGRRLRHVNQEVAMLKWRQDSEARTTREKEGVTDREVLDEDTPSGIPGWYLATPSWAEGVKKSYMKRRRNTMLCKNWLKAREGGRSAPSGAPRWWGCPRGRDCDFAHGEEELRGEGLTEFKRAKKQEAQRXXQQEL 242          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A3F2RQA1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQA1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.190e-51
Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TTDFGACRDL GRRLRHVN E+ + KW++D E     EK       V D  TPSGI GW+L  P+WAEGVK S+MK RR TMLC+ WL AR+  R AP+GAP WWGCPRGR CDFAHG+EELRG+GL EFKR ++Q+ +   Q  L
Sbjct:  243 SGAKATTDFGACRDLHGRRLRHVNQEVAMLKWRQDSEARTTREKEGVTDREVLDEDTPSGIPGWYLATPSWAEGVKKSYMKRRRNTMLCKNWLKAREGGRSAPSGAPRWWGCPRGRDCDFAHGEEELRGEGLTEFKRAKKQEAQRXXQQEL 393          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: K3WRR0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRR0_GLOUD)

HSP 1 Score: 179 bits (455), Expect = 9.240e-51
Identity = 90/153 (58.82%), Postives = 113/153 (73.86%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRE-RENR------GEKVEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGLDK 149
            AGAK TT FGACRDL GRRLRHVN EI +QKW+ED E RE R       +++ D +TPSGI GW+L +P+WAEGVK S+MK RR T++C+ WL AR+  R AP  AP WWGCPRGR CDFAHG+EELRG GL E+K+ ++++  + +Q  L K
Sbjct:   92 AGAKATTSFGACRDLNGRRLRHVNQEIAVQKWREDGETREQRKKLGVTDQEIMDEETPSGIPGWYLAMPSWAEGVKKSYMKRRRNTIMCKSWLQARENGRTAPPNAPRWWGCPRGRDCDFAHGEEELRGAGLTEYKKSKKEEVYQTKQQELQK 244          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: M4BHB1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BHB1_HYAAE)

HSP 1 Score: 177 bits (448), Expect = 4.420e-50
Identity = 88/155 (56.77%), Postives = 111/155 (71.61%), Query Frame = 0
Query:    1 LKSQAGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEKVE-------DTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +   AGAK TTDFGACRDL GRRLRHVN E+ ++KW E+++     EK +       D +T SGI GW+L  P+WAEGVK S MK RR T+LC+ WL AR+  R+AP+GAP WWGCPRGR CDFAHG+EELRG+GL E KR ++++T   +Q  L
Sbjct:   90 MGKSAGAKATTDFGACRDLHGRRLRHVNQEVAMRKWLEEKDARGEREKKQVDERELMDEETRSGIPGWYLATPSWAEGVKKSHMKRRRNTVLCKSWLKAREGGRRAPSGAPRWWGCPRGRDCDFAHGQEELRGEGLTELKRVKKEETERVQQLAL 244          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A6A3P1D7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P1D7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 8.750e-50
Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAP-NGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TTDFGACRDL GRRLRHVN E+ + KWQ+D +   + EK         D  TPSGI GW+L  P+WAEG+K S+MK RR T+LC  WL AR+  +AP +GAP WWGCPRGR CDFAHG+EELRG+GL EFKR ++++ +  +Q  L
Sbjct:   92 SGAKATTDFGACRDLHGRRLRHVNQEVAMHKWQKDADARAQREKDGVLDRETLDEDTPSGIPGWYLATPSWAEGIKKSYMKRRRNTVLCTSWLKAREGGRAPPSGAPRWWGCPRGRDCDFAHGEEELRGEGLTEFKRAKKEEAQRAKQQQL 242          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: H3GXJ2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXJ2_PHYRM)

HSP 1 Score: 177 bits (448), Expect = 1.330e-49
Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAP-NGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TT+FGACRDL GRRLRHVN E+ + KWQ+D E  ++ EK       + D +TPSGI GW+L  P+WAEGVK S+MK RR T+LC+ W  AR+  +AP +GAP WWGCPRGR CDFAHG++ELRG+GL +FKR ++ D +  +Q  L
Sbjct:   93 SGAKATTNFGACRDLHGRRLRHVNQEVAMSKWQQDGEARSKREKDGVTDQEMMDEETPSGIPGWYLATPSWAEGVKKSYMKRRRNTVLCKSWAKAREGGRAPPDGAPRWWGCPRGRQCDFAHGEQELRGEGLTDFKRAKRDDAQRLKQQEL 243          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A662WT90_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WT90_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.380e-49
Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TTDFGACRDL GRRLRHVN E+ + KW++D E   R E+       V D +TPSGI GW+L  P+WAEGV+ S+MK RR TMLC+ W  AR+  R AP GAP WWGCPRGR CDFAHG+EELRG+GL + KR ++++ +  +Q  L
Sbjct:   93 SGAKATTDFGACRDLHGRRLRHVNQEVAMHKWRQDGEARARREQDGVTEREVLDEETPSGIPGWYLATPSWAEGVRKSYMKRRRNTMLCKNWKQAREGGRTAPQGAPRWWGCPRGRDCDFAHGEEELRGEGLTDLKRAKREEAQRAKQQEL 243          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A662WQ04_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQ04_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.550e-49
Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TTDFGACRDL GRRLRHVN E+ + KW++D E   R E+       V D +TPSGI GW+L  P+WAEGV+ S+MK RR TMLC+ W  AR+  R AP GAP WWGCPRGR CDFAHG+EELRG+GL + KR ++++ +  +Q  L
Sbjct:   93 SGAKATTDFGACRDLHGRRLRHVNQEVAMHKWRQDGEARARREQDGITEREVLDEETPSGIPGWYLATPSWAEGVRKSYMKRRRNTMLCKNWKQAREGGRTAPQGAPRWWGCPRGRDCDFAHGEEELRGEGLTDLKRAKREEAQRAKQQEL 243          
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A225WZ16_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ16_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.140e-49
Identity = 86/150 (57.33%), Postives = 106/150 (70.67%), Query Frame = 0
Query:    5 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 147
            +GAK TTDFGACRDL GRRLRHVN E+ L KWQ+D E   + EK       + D +TPSGI GW+L  P+WAEGVK S+MK RR T+LC  W  AR+ +  P G P WWGCPRGR CDFAHG+EELRG+ L EFKR ++++ +  +Q  L
Sbjct:   91 SGAKATTDFGACRDLHGRRLRHVNQEVALLKWQQDGEARAKREKDGVEEREILDEETPSGIPGWYLATPSWAEGVKKSYMKRRRNTVLCTSWQKAREGQDPPPGEPRWWGCPRGRNCDFAHGEEELRGESLTEFKRAKKEEKQRAKQQEL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEW6_ECTSI1.380e-8181.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3R7I1I3_9STRA7.980e-5260.93Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A3F2RQA1_9STRA3.190e-5160.93Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
K3WRR0_GLOUD9.240e-5158.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
M4BHB1_HYAAE4.420e-5056.77Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A3P1D7_9STRA8.750e-5057.62Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
H3GXJ2_PHYRM1.330e-4956.95Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662WT90_9STRA1.380e-4957.62Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662WQ04_9STRA1.550e-4957.62Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A225WZ16_9STRA3.140e-4957.33Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 75..126
e-value: 2.8E-7
score: 31.8
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 2..52
NoneNo IPR availablePANTHERPTHR12786:SF1REPLICATION STRESS RESPONSE REGULATOR SDE2coord: 2..52
IPR024974Sde2, N-terminal ubiquitin domainPFAMPF13019Sde2_N_Ubicoord: 8..51
e-value: 5.1E-8
score: 32.9
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 80..121
score: 10.042

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115353contigH-elongata_contig115353:290..2068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115353.1218.1mRNA_H-elongata_contig115353.1218.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115353 290..2068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115353.1218.1 ID=prot_H-elongata_contig115353.1218.1|Name=mRNA_H-elongata_contig115353.1218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
LKSQAGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEKVE
DTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAPN
GAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGLDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024974Sde2_N
IPR000571Znf_CCCH