mRNA_H-elongata_contig115353.1218.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: D8LEW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEW6_ECTSI) HSP 1 Score: 261 bits (667), Expect = 1.380e-81 Identity = 121/149 (81.21%), Postives = 136/149 (91.28%), Query Frame = 1
Query: 1 LKSQAGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEKVEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGLDK 447
+ QAGAKPTTDFGACRDLQGRRLRHVNDE+RLQKWQE+RERE+RGEKVE+ KT SGIE WHLGVPTWAEG K S+MK+RRKT++CQQWLDARK+RKAP GAPPWWGCPRGRGCDFAHGKEELRGKGLEEF +K +++ REK+Q LDK
Sbjct: 127 MAKQAGAKPTTDFGACRDLQGRRLRHVNDEVRLQKWQENRERESRGEKVEEEKTQSGIENWHLGVPTWAEGAKPSYMKTRRKTVICQQWLDARKDRKAPQGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFNQKDRKEKREKKQFDLDK 275
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A3R7I1I3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7I1I3_9STRA) HSP 1 Score: 183 bits (464), Expect = 7.980e-52 Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TTDFGACRDL GRRLRHVN E+ + KW++D E EK V D TPSGI GW+L P+WAEGVK S+MK RR TMLC+ WL AR+ R AP+GAP WWGCPRGR CDFAHG+EELRG+GL EFKR ++Q+ + Q L
Sbjct: 92 SGAKATTDFGACRDLHGRRLRHVNQEVAMLKWRQDSEARTTREKEGVTDREVLDEDTPSGIPGWYLATPSWAEGVKKSYMKRRRNTMLCKNWLKAREGGRSAPSGAPRWWGCPRGRDCDFAHGEEELRGEGLTEFKRAKKQEAQRXXQQEL 242
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A3F2RQA1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQA1_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.190e-51 Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TTDFGACRDL GRRLRHVN E+ + KW++D E EK V D TPSGI GW+L P+WAEGVK S+MK RR TMLC+ WL AR+ R AP+GAP WWGCPRGR CDFAHG+EELRG+GL EFKR ++Q+ + Q L
Sbjct: 243 SGAKATTDFGACRDLHGRRLRHVNQEVAMLKWRQDSEARTTREKEGVTDREVLDEDTPSGIPGWYLATPSWAEGVKKSYMKRRRNTMLCKNWLKAREGGRSAPSGAPRWWGCPRGRDCDFAHGEEELRGEGLTEFKRAKKQEAQRXXQQEL 393
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: K3WRR0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRR0_GLOUD) HSP 1 Score: 179 bits (455), Expect = 9.240e-51 Identity = 90/153 (58.82%), Postives = 113/153 (73.86%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRE-RENR------GEKVEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGLDK 447
AGAK TT FGACRDL GRRLRHVN EI +QKW+ED E RE R +++ D +TPSGI GW+L +P+WAEGVK S+MK RR T++C+ WL AR+ R AP AP WWGCPRGR CDFAHG+EELRG GL E+K+ ++++ + +Q L K
Sbjct: 92 AGAKATTSFGACRDLNGRRLRHVNQEIAVQKWREDGETREQRKKLGVTDQEIMDEETPSGIPGWYLAMPSWAEGVKKSYMKRRRNTIMCKSWLQARENGRTAPPNAPRWWGCPRGRDCDFAHGEEELRGAGLTEYKKSKKEEVYQTKQQELQK 244
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: M4BHB1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BHB1_HYAAE) HSP 1 Score: 177 bits (448), Expect = 4.420e-50 Identity = 88/155 (56.77%), Postives = 111/155 (71.61%), Query Frame = 1
Query: 1 LKSQAGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEKVE-------DTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+ AGAK TTDFGACRDL GRRLRHVN E+ ++KW E+++ EK + D +T SGI GW+L P+WAEGVK S MK RR T+LC+ WL AR+ R+AP+GAP WWGCPRGR CDFAHG+EELRG+GL E KR ++++T +Q L
Sbjct: 90 MGKSAGAKATTDFGACRDLHGRRLRHVNQEVAMRKWLEEKDARGEREKKQVDERELMDEETRSGIPGWYLATPSWAEGVKKSHMKRRRNTVLCKSWLKAREGGRRAPSGAPRWWGCPRGRDCDFAHGQEELRGEGLTELKRVKKEETERVQQLAL 244
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A6A3P1D7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P1D7_9STRA) HSP 1 Score: 177 bits (450), Expect = 8.750e-50 Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAP-NGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TTDFGACRDL GRRLRHVN E+ + KWQ+D + + EK D TPSGI GW+L P+WAEG+K S+MK RR T+LC WL AR+ +AP +GAP WWGCPRGR CDFAHG+EELRG+GL EFKR ++++ + +Q L
Sbjct: 92 SGAKATTDFGACRDLHGRRLRHVNQEVAMHKWQKDADARAQREKDGVLDRETLDEDTPSGIPGWYLATPSWAEGIKKSYMKRRRNTVLCTSWLKAREGGRAPPSGAPRWWGCPRGRDCDFAHGEEELRGEGLTEFKRAKKEEAQRAKQQQL 242
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: H3GXJ2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXJ2_PHYRM) HSP 1 Score: 177 bits (448), Expect = 1.330e-49 Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAP-NGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TT+FGACRDL GRRLRHVN E+ + KWQ+D E ++ EK + D +TPSGI GW+L P+WAEGVK S+MK RR T+LC+ W AR+ +AP +GAP WWGCPRGR CDFAHG++ELRG+GL +FKR ++ D + +Q L
Sbjct: 93 SGAKATTNFGACRDLHGRRLRHVNQEVAMSKWQQDGEARSKREKDGVTDQEMMDEETPSGIPGWYLATPSWAEGVKKSYMKRRRNTVLCKSWAKAREGGRAPPDGAPRWWGCPRGRQCDFAHGEQELRGEGLTDFKRAKRDDAQRLKQQEL 243
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A662WT90_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WT90_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.380e-49 Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TTDFGACRDL GRRLRHVN E+ + KW++D E R E+ V D +TPSGI GW+L P+WAEGV+ S+MK RR TMLC+ W AR+ R AP GAP WWGCPRGR CDFAHG+EELRG+GL + KR ++++ + +Q L
Sbjct: 93 SGAKATTDFGACRDLHGRRLRHVNQEVAMHKWRQDGEARARREQDGVTEREVLDEETPSGIPGWYLATPSWAEGVRKSYMKRRRNTMLCKNWKQAREGGRTAPQGAPRWWGCPRGRDCDFAHGEEELRGEGLTDLKRAKREEAQRAKQQEL 243
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A662WQ04_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQ04_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.550e-49 Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKE-RKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TTDFGACRDL GRRLRHVN E+ + KW++D E R E+ V D +TPSGI GW+L P+WAEGV+ S+MK RR TMLC+ W AR+ R AP GAP WWGCPRGR CDFAHG+EELRG+GL + KR ++++ + +Q L
Sbjct: 93 SGAKATTDFGACRDLHGRRLRHVNQEVAMHKWRQDGEARARREQDGITEREVLDEETPSGIPGWYLATPSWAEGVRKSYMKRRRNTMLCKNWKQAREGGRTAPQGAPRWWGCPRGRDCDFAHGEEELRGEGLTDLKRAKREEAQRAKQQEL 243
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Match: A0A225WZ16_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ16_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.140e-49 Identity = 86/150 (57.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 13 AGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEK-------VEDTKTPSGIEGWHLGVPTWAEGVKASFMKSRRKTMLCQQWLDARKERKAPNGAPPWWGCPRGRGCDFAHGKEELRGKGLEEFKRKQQQDTREKRQHGL 441
+GAK TTDFGACRDL GRRLRHVN E+ L KWQ+D E + EK + D +TPSGI GW+L P+WAEGVK S+MK RR T+LC W AR+ + P G P WWGCPRGR CDFAHG+EELRG+ L EFKR ++++ + +Q L
Sbjct: 91 SGAKATTDFGACRDLHGRRLRHVNQEVALLKWQQDGEARAKREKDGVEEREILDEETPSGIPGWYLATPSWAEGVKKSYMKRRRNTVLCTSWQKAREGQDPPPGEPRWWGCPRGRNCDFAHGEEELRGESLTEFKRAKKEEKQRAKQQEL 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115353.1218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115353.1218.1 >prot_H-elongata_contig115353.1218.1 ID=prot_H-elongata_contig115353.1218.1|Name=mRNA_H-elongata_contig115353.1218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp LKSQAGAKPTTDFGACRDLQGRRLRHVNDEIRLQKWQEDRERENRGEKVEback to top mRNA from alignment at H-elongata_contig115353:290..2068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115353.1218.1 ID=mRNA_H-elongata_contig115353.1218.1|Name=mRNA_H-elongata_contig115353.1218.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1779bp|location=Sequence derived from alignment at H-elongata_contig115353:290..2068+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115353:290..2068+ >mRNA_H-elongata_contig115353.1218.1 ID=mRNA_H-elongata_contig115353.1218.1|Name=mRNA_H-elongata_contig115353.1218.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig115353:290..2068+ (Himanthalia elongata Himel1 dioecious)back to top |